Cite the Following Article
Fluorescent nucleobase analogues for base–base FRET in nucleic acids: synthesis, photophysics and applications
Mattias Bood, Sangamesh Sarangamath, Moa S. Wranne, Morten Grøtli and L. Marcus Wilhelmsson
Beilstein J. Org. Chem. 2018, 14, 114–129.
https://doi.org/10.3762/bjoc.14.7
How to Cite
Bood, M.; Sarangamath, S.; Wranne, M. S.; Grøtli, M.; Wilhelmsson, L. M. Beilstein J. Org. Chem. 2018, 14, 114–129. doi:10.3762/bjoc.14.7
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- Khatik, S. Y.; Srivatsan, S. G. Environment-Sensitive Nucleoside Probe Unravels the Complex Structural Dynamics of i-Motif DNAs. Bioconjugate chemistry 2022, 33, 1515–1526. doi:10.1021/acs.bioconjchem.2c00237
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- Cooperman, B. S. Site-Specific Fluorescent Labeling of RNA Interior Positions. Molecules (Basel, Switzerland) 2021, 26, 1341. doi:10.3390/molecules26051341
- Chibac-Scutaru, A. L.; Cojocaru, C.; Roman, G.; Samoila, P.; Sacarescu, G.; Simionescu, M.; Sacarescu, L. Synthesis of benzaldehyde-grafted polysilane: A highly stable and selective “turn-on” fluorescent sensor for cytosine. Journal of Molecular Liquids 2021, 326, 115300. doi:10.1016/j.molliq.2021.115300
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- ELIN ESBJORNER WINTERS; MARCUS WILHELMSSON; PAULINE PFEIFFER; AUDREY GALLARD; JESPER NILSSON. Fluorescent nucleoside triphosphates. GB 2605952 A, Oct 26, 2022.
- BROWN TOM; EL-SAGHEER AFAF HELMY; KUMAR PAWAN. Dinucleotides. US 11110114 B2, Sept 7, 2021.
- BROWN TOM; EL-SAGHEER AFAF HELMY; KUMAR PAWAN. Oligonucleotides. US 11104700 B2, Aug 31, 2021.