Beilstein J. Org. Chem.2012,8, 905–914, doi:10.3762/bjoc.8.103
with a representative set of chromophore-modified oligonucleotides and found that the DNA-polymerase-catalyzed nucleotide incorporation opposite to attached chromophores at the 5-position of uridine follows Watson–Crick selectivity [49]. In the meantime, DNA polymerases have been evolved that have an
photoswitchable components in nucleic acids and are suitable for the control of a variety of different biological functions. The photoinduced cis–trans isomerization of azobenzene nucleosides can reversibly switch between the formation and dissociation of DNA duplexes [14][15][16][17], photoregulate DNA
polymerase reaction [18], photocontrol DNA triplex formation [19], and drive photon-fueled DNA-based nanomachines [20][21].
Concerning the extent of structural change, the cis–trans isomerization of azobenzenes behaves much simpler than the ring opening of spiropyrans to merocyanines. In the latter case not
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Graphical Abstract
Scheme 1:
Spiropyran as DNA base surrogate 1, DNA base modifications 2 and 3, and diarylethene-modified nucle...