[2 + 1] Cycloaddition reactions of fullerene C₆₀ based on diazo compounds

• Yuliya N. Biglova

Beilstein J. Org. Chem. 2021, 17, 630–670, doi:10.3762/bjoc.17.55

• ]PCBM; diazo compounds; mechanisms and optimal conditions of cyclopropanation; methanofullerenes C60; Introduction Taking into consideration that all life on Earth is of organic origin. with carbon as its basic element (20% by weight of every living organism, and the fourth most abundant element in the

• synthetic organic chemists as it allows to obtain methanofullerenes, fullerenoaziridines, or fullerenooxyranes. These reactions can involve, for example, the addition of stabilized carbanions, carbenes, and nitrenes and can involve various reaction mechanisms. While in the early years of intense research on

• can be due to a number of reasons. First, two cyclopropanation mechanisms are equally likely in the thermal reaction of diazo compounds with C60 fullerene: a) preliminary carbene formation due to the thermal decomposition of diazo compounds, followed by synchronous addition to the double [6,6]-bond in

Valorisation of plastic waste via metal-catalysed depolymerisation

• Francesca Liguori,
• Carmen Moreno-Marrodán and
• Pierluigi Barbaro

Beilstein J. Org. Chem. 2021, 17, 589–621, doi:10.3762/bjoc.17.53

• supported metal species (Ru, Ir), due to the ability to activate molecular hydrogen, functioning as redox centres. The mechanisms of the metal-catalysed solvolytic reactions of plastics are all very similar and typical of conventional organic processes: a metal ion acts as Lewis acid centre for the

Breakdown of 3-(allylsulfonio)propanoates in bacteria from the Roseobacter group yields garlic oil constituents

• Anuj Kumar Chhalodia and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2021, 17, 569–580, doi:10.3762/bjoc.17.51

• of the strains investigated in this study. Synthesis of DMSP derivatives. Proposed mechanisms for the formation of sulfur volatiles from DAllSP and AllMSP. Synthesis of A) methyl 3-(allyldisulfanyl)propanoate (26) and B) methyl 3-(methylsulfonyl)propanoate (27). Volatiles from agar plate cultures fed

Biochemistry of fluoroprolines: the prospect of making fluorine a bioelement

• Vladimir Kubyshkin,
• Rebecca Davis and
• Nediljko Budisa

Beilstein J. Org. Chem. 2021, 17, 439–460, doi:10.3762/bjoc.17.40

CF₃-substituted carbocations: underexploited intermediates with great potential in modern synthetic chemistry

• Anthony J. Fernandes,
• Armen Panossian,
• Bastien Michelet,
• Agnès Martin-Mingot,
• Frédéric R. Leroux and
• Sébastien Thibaudeau

Beilstein J. Org. Chem. 2021, 17, 343–378, doi:10.3762/bjoc.17.32

The preparation and properties of 1,1-difluorocyclopropane derivatives

• Kymbat S. Adekenova,
• Peter B. Wyatt and
• Sergazy M. Adekenov

Beilstein J. Org. Chem. 2021, 17, 245–272, doi:10.3762/bjoc.17.25

• selection of the reagents and catalysts. These have an influence on the mechanism and regioselectivity of the C–C bond cleavage. Although there are several different mechanisms for ring-opening reactions, in most cases there is a cleavage of the most weakened C–C bond due to the fluorine effect. This C–C

• mechanisms of the ring opening that are favored in particular examples are determined by the additional substituents present on the cyclopropane ring, as well as the choice of reagents, catalysts, and conditions. The carbon atom 1 of the 1,1-difluorocyclopropane system, being attached directly to the

Selective synthesis of α-organylthio esters and α-organylthio ketones from β-keto esters and sodium S-organyl sulfurothioates under basic conditions

• Jean C. Kazmierczak,
• Roberta Cargnelutti,
• Thiago Barcellos,
• Claudio C. Silveira and
• Ricardo F. Schumacher

Beilstein J. Org. Chem. 2021, 17, 234–244, doi:10.3762/bjoc.17.24

• between the keto and the enol tautomer is given based on the 1H NMR analysis. These results are consistent with the report by Tan and collaborators [55] and are evidence to help understand the reaction mechanism. Although detailed mechanisms for these reactions remain to be elucidated, the literature has

• the 3-oxocarboxylate ion G, which decarboxylates at a high temperature, providing the product 4. Finally, to validate the role of the Bunte salt as a sulfur source and to gain further insights into the mechanisms, several control experiments were performed, as can be seen in Supporting Information

Insight into functionalized-macrocycles-guided supramolecular photocatalysis

• Minzan Zuo,
• Krishnasamy Velmurugan,
• Kaiya Wang,
• Xueqi Tian and
• Xiao-Yu Hu

Beilstein J. Org. Chem. 2021, 17, 139–155, doi:10.3762/bjoc.17.15

• , calixarenes, and pillararenes. This minireview not only summarizes the role that macrocycles play in photocatalytic reactions but also clarifies the photocatalytic mechanisms. Finally, the future research efforts and new pathways to apply macrocycles and supramolecular hybrid materials in photocatalysis are

• role of the photochemical macrocyclic-host-assisted catalytic reaction of different guests as well as hybrid materials in energy transfer were summarized. Moreover, the mechanisms of these supramolecular systems during the photochemical reactions were also highlighted. Due to the inherent limiting

Direct synthesis of anomeric tetrazolyl iminosugars from sugar-derived lactams

• Michał M. Więcław and
• Bartłomiej Furman

Beilstein J. Org. Chem. 2021, 17, 115–123, doi:10.3762/bjoc.17.12

• the energy differences in the subsequent steps of the examined reaction. The reported energy barriers are reasonably high for a slow process taking place at room temperature. The overall barrier is not considerably different to those previously published for typical mechanisms of tetrazole formation by

Supramolecular polymers with reversed viscosity/temperature profile for application in motor oils

• Jan-Erik Ostwaldt,
• Christoph Hirschhäuser,
• Stefan K. Maier,
• Carsten Schmuck and
• Jochen Niemeyer

Beilstein J. Org. Chem. 2021, 17, 105–114, doi:10.3762/bjoc.17.11

• mechanisms for the formation of supramolecular polymers from molecular building blocks: The isodesmic, the cooperative and the ring–chain-mediated supramolecular polymerization [10]. For an application in viscosity improvement, a higher degree of polymerization is desired at elevated temperatures, which can

Molecular basis for protein–protein interactions

• Brandon Charles Seychell and
• Tobias Beck

Beilstein J. Org. Chem. 2021, 17, 1–10, doi:10.3762/bjoc.17.1

• discussed here can be employed to detect PPIs. Miura [41] and Carter et al. [11] provided a detailed explanation and comparison of such methodologies. Molecular interactions involved in PPIs There are different forces and mechanisms that affect PPIs and their formation, including hydrogen bonding [42][43

• ], van der Waals interactions [44], hydrophobic interactions, and electrostatic forces. This section will provide an overview on the role of molecular interactions on PPIs and the mechanisms of protein–protein complex formation. PPIs have to be specific enough for a particular protein to be able to

• ], producing two different modes of binding: pH-dependent and salt-dependent binding mechanisms. In a pH-dependent binding mechanism, an overall proton is either released or taken up during the protein interaction due to the binding-induced pKa shift of acidic or basic amino acids present at the complex

Secondary metabolites of Bacillus subtilis impact the assembly of soil-derived semisynthetic bacterial communities

• Heiko T. Kiesewalter,
• Carlos N. Lozano-Andrade,
• Mikael L. Strube and
• Ákos T. Kovács

Beilstein J. Org. Chem. 2020, 16, 2983–2998, doi:10.3762/bjoc.16.248

• specific members of the mock community, and consequently an indirect effect on Lysinibacillus. Nevertheless, the exact mechanisms at play remain to be deciphered. Interestingly, the two genera Lysinibacillus and Viridibacillus of the mock communities are, besides Paenibacillus, the closest relatives of B

Ultrasound-assisted Strecker synthesis of novel 2-(hetero)aryl-2-(arylamino)acetonitrile derivatives

• Emese Gal,
• Luiza Gaina,
• Hermina Petkes,
• Alexandra Pop,
• Castelia Cristea,
• Gabriel Barta,
• Dan Cristian Vodnar and
• Luminiţa Silaghi-Dumitrescu

Beilstein J. Org. Chem. 2020, 16, 2929–2936, doi:10.3762/bjoc.16.242

• are related to the possibility of controlling the crystal structure properties of the final product in nanomaterials syntheses [5]. For this reason, theoretical scientific research is currently directed towards the understanding of the physical phenomena involved in sonocrystallization mechanisms [6

One-pot multicomponent green Hantzsch synthesis of 1,2-dihydropyridine derivatives with antiproliferative activity

• Giovanna Bosica,
• Kaylie Demanuele,
• José M. Padrón and
• Adrián Puerta

Beilstein J. Org. Chem. 2020, 16, 2862–2869, doi:10.3762/bjoc.16.235

• oxidizing agents [7][17][18]. One of the greatest limitations of this synthesis is however the fact that the dihydropyridines that are obtained are usually the 1,4-symmetrical ones. This multicomponent reaction has been thought to have one of the most complex mechanisms since various routes might take place

On the mass spectrometric fragmentations of the bacterial sesterterpenes sestermobaraenes A–C

• Anwei Hou and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2020, 16, 2807–2819, doi:10.3762/bjoc.16.231

• investigation of the electron impact mass spectrometry (EIMS) fragmentation reactions of these sesterterpene hydrocarbons. Keywords: isotopes; mass spectrometry; reaction mechanisms; sesterterpenes; Streptomyces mobaraensis; Introduction The sestermobaraenes A–F (1–6) and sestermobaraol (7) are a series of

• isotopic labelling experiments can give more detailed and conclusive insights. We have recently investigated the MS fragmentation mechanisms of several sesqui- and diterpenes in a series of studies that made use of 13C-labelled terpene precursors to systematically introduce single labellings into each

• individual carbon position by enzymatic synthesis [14][29][30][31][32]. Here we report on the MS fragmentation mechanisms for the bacterial compounds sestermobaraenes A, B, and C, representing the first mechanistic study of this kind for sesterterpenes. Results and Discussion Experimental basis The 25

3-Acetoxy-fatty acid isoprenyl esters from androconia of the ithomiine butterfly Ithomia salapia

• Florian Mann,
• Daiane Szczerbowski,
• Lisa de Silva,
• Melanie McClure,
• Marianne Elias and
• Stefan Schulz

Beilstein J. Org. Chem. 2020, 16, 2776–2787, doi:10.3762/bjoc.16.228

• studies on speciation (species formation), as species often consist of multiple subspecies diverging for a number of adaptive traits, such as color pattern or host plants, which can then cause reproductive isolation. As such, they offer an excellent system to study the mechanisms underlying

Ring-closing metathesis of prochiral oxaenediynes to racemic 4-alkenyl-2-alkynyl-3,6-dihydro-2H-pyrans

• Viola Kolaříková,
• Markéta Rybáčková,
• Martin Svoboda and
• Jaroslav Kvíčala

Beilstein J. Org. Chem. 2020, 16, 2757–2768, doi:10.3762/bjoc.16.226

• both mechanisms and generally follow the ene-then-yne mechanism for substrates with a sterically unhindered double bond, yielding the exo-products (Scheme 1) [21][22][23][24][25][26]. The presence of ethene (Mori conditions) is often beneficial in RCEYM reactions, giving significantly better yields

Encrypting messages with artificial bacterial receptors

• Pragati Kishore Prasad,
• Naama Lahav-Mankovski,
• Leila Motiei and
• David Margulies

Beilstein J. Org. Chem. 2020, 16, 2749–2756, doi:10.3762/bjoc.16.225

• generated by such systems can be used to secure information via different mechanisms. For example, we have used such probes to hide (steganography) [5], encrypt (cryptography) [5], and prevent access to information (password protection) [4][5]. Recently, we have constructed self-assembled, pattern

Activation of pentafluoropropane isomers at a nanoscopic aluminum chlorofluoride: hydrodefluorination versus dehydrofluorination

• Maëva-Charlotte Kervarec,
• Thomas Braun,
• Mike Ahrens and
• Erhard Kemnitz

Beilstein J. Org. Chem. 2020, 16, 2623–2635, doi:10.3762/bjoc.16.213

• remarkable since other catalytic conversions at chromia-based catalysts require elevated temperatures [11][19][59][60][61][62]. The mechanisms for the C−F bond cleavage starting from 10c to yield the isomers 4 are similar to the ones proposed in the activation of 10a in the presence of silane (see above

Computational tools for drawing, building and displaying carbohydrates: a visual guide

• Kanhaya Lal,
• Rafael Bermeo and
• Serge Perez

Beilstein J. Org. Chem. 2020, 16, 2448–2468, doi:10.3762/bjoc.16.199

• structure as a central element in the characterisation of biological function. An adequate understanding of biomolecular mechanisms inherently requires our ability to model and visualise them. Visualisation of molecular structures is thus one of the most common tasks performed by structural biologists. As

Recent developments in enantioselective photocatalysis

• Callum Prentice,
• James Morrisson,
• Andrew D. Smith and
• Eli Zysman-Colman

Beilstein J. Org. Chem. 2020, 16, 2363–2441, doi:10.3762/bjoc.16.197

• recent developments and a particular interest in the proposed mechanisms for each. With the aim of understanding the scope of each strategy, to help guide and inspire further innovation in this field. Keywords: enantioenrichment; enantionselective catalysis; enantioselective photocatalysis

• enantioselectivity, the review will be organized according to these strategies. Mechanistic understanding is vital to furthering development of any field of organic chemistry, so the mechanisms proposed by the authors are included for many examples, although the level of mechanistic investigation that accompanies

Photosensitized direct C–H fluorination and trifluoromethylation in organic synthesis

• Shahboz Yakubov and
• Joshua P. Barham

Beilstein J. Org. Chem. 2020, 16, 2151–2192, doi:10.3762/bjoc.16.183

• for inducing different organic transformations under extremely mild conditions without threatening reagents and conditions [83][84][85]. There are three commonly observed and distinct mechanisms of photocatalytic activation [86] in the context of organic synthesis: i) Most reported photocatalytic

• to the ground state and the substrate is excited to its triplet excited state to undergo downstream chemistry. In the case of triplet Selectfluor®, plausible mechanisms for the downstream chemistry are shown in Scheme 4 and discussed in more detail in the following section. 3 C–H fluorination of

Isolation and structure determination of a tetrameric sulfonyl dilithio methandiide in solution based on crystal structure analysis and ⁶Li/¹³C NMR spectroscopic data

• Jürgen Vollhardt,
• Hans Jörg Lindner and
• Hans-Joachim Gais

Beilstein J. Org. Chem. 2020, 16, 2057–2063, doi:10.3762/bjoc.16.172

• couplings shows, however, that the carbon lithium bonds in 2a-I have a covalent contribution as generally observed for organolithiums [55]. Three mechanisms most likely contribute to the stabilization of the negative charge of the carbon atoms of tetramer (2a)4·(THF)6 and hexamer (2a)6·Li2O·(THF)6

Synthesis, docking study and biological evaluation of ᴅ-fructofuranosyl and ᴅ-tagatofuranosyl sulfones as potential inhibitors of the mycobacterial galactan synthesis targeting the galactofuranosyltransferase GlfT2

• Marek Baráth,
• Jana Jakubčinová,
• Zuzana Konyariková,
• Stanislav Kozmon,
• Katarína Mikušová and
• Maroš Bella

Beilstein J. Org. Chem. 2020, 16, 1853–1862, doi:10.3762/bjoc.16.152

• mechanism studies using computational chemistry methods. The probable reaction mechanisms were studied by hybrid DFT QM/MM molecular dynamics simulations [11] where the possible transition state (TS) structures were localized. The observation of the possible TS structure opens the opportunities for the in

One-pot synthesis of oxazolidinones and five-membered cyclic carbonates from epoxides and chlorosulfonyl isocyanate: theoretical evidence for an asynchronous concerted pathway

• Esra Demir,
• Ozlem Sari,
• Yasin Çetinkaya,
• Ufuk Atmaca,
• Safiye Sağ Erdem and
• Murat Çelik

Beilstein J. Org. Chem. 2020, 16, 1805–1819, doi:10.3762/bjoc.16.148

• reaction of CSI with epoxides in different solvents under mild conditions and compared the reaction mechanism with previously proposed mechanisms using theoretical calculations. Keshava Murthy and Dhar [41] postulated a mechanism involving a zwitterionic intermediate. C–O bond cleavage in this unstable and

• computational studies, such reactions of isocyanates may proceed through a concerted pathway. The remaining uncertainties in the mechanisms of the similar reactions inspired us to carry out quantum chemical calculations for the formation of oxazolidinone and five-membered cyclic carbonates. Results and

• mechanisms leading to oxazolidinone 9f and cyclic carbonate 8f were examined. The calculated energy difference between the TS1 (leading to 9f) and TS6 (leading to 8f) is very small (0.5 kcal/mol) but slightly in favor of carbonate 8f which is in very good agreement with the experimental observation that