Tenacibactins K–M, cytotoxic siderophores from a coral-associated gliding bacterium of the genus Tenacibaculum

• Yasuhiro Igarashi,
• Yiwei Ge,
• Tao Zhou,
• Amit Raj Sharma,
• Enjuro Harunari,
• Naoya Oku and
• Agus Trianto

Beilstein J. Org. Chem. 2022, 18, 110–119, doi:10.3762/bjoc.18.12

• /succinic acid module (Scheme 1, paths E1 and E2). The third elimination product, C15-ketene (structure in square brackets, Scheme 1) was not observed, but a pentadecenoate anion, appearing at m/z 239, warranted the existence of fragmentation path E3 and also the chain length of the acyl unit. Hydration of

α-Ketol and α-iminol rearrangements in synthetic organic and biosynthetic reactions

• Scott Benz and
• Andrew S. Murkin

Beilstein J. Org. Chem. 2021, 17, 2570–2584, doi:10.3762/bjoc.17.172

• . hypothesized that by conducting the reaction in the presence of water, the reaction would be diverted to an initial hydration followed by an α-ketol rearrangement [10]. First, it was determined with model 1-alkynylcyclobutanol derivative 24 that in anhydrous conditions, the major product was 25, resulting from

• the expected direct ring expansion (Figure 7). When the reaction was repeated in the presence of a single drop of water, however, only product 26 was observed, presumably by the hydration–rearrangement sequence. The intermediacy of the cyclobutyl α-ketol 27 was indirectly confirmed using diphenyl

• hypothesized by several groups that one could be the biological precursor of the other by means of a reversible hydration–rearrangement–dehydration sequence (Figure 16a) [24][25][26]. The presence of the diazo group in intermediates 78 and 79 is noteworthy in that this functional group has not yet been

Recent advances in the tandem annulation of 1,3-enynes to functionalized pyridine and pyrrole derivatives

• Yi Liu,
• Puying Luo,
• Yang Fu,
• Tianxin Hao,
• Xuan Liu,
• Qiuping Ding and
• Yiyuan Peng

Beilstein J. Org. Chem. 2021, 17, 2462–2476, doi:10.3762/bjoc.17.163

• corresponding plausible mechanism is shown in Scheme 19. Firstly, Au-coordinated alkyne undergoes regioselective hydration to form intermediate 48. Then, intramolecular nucleophilic attack by azide occurs to give 2-carbonyl intermediate 49. Subsequently, intermediate 49 will undergo aromatization as well as the

Synthesis of 5-arylacetylenyl-1,2,4-oxadiazoles and their transformations under superelectrophilic activation conditions

• Andrey I. Puzanov,
• Dmitry S. Ryabukhin,
• Anna S. Zalivatskaya,
• Dmitriy N. Zakusilo,
• Darya S. Mikson,
• Irina A. Boyarskaya and
• Aleksander V. Vasilyev

Beilstein J. Org. Chem. 2021, 17, 2417–2424, doi:10.3762/bjoc.17.158

• ), oxadiazole 3a gave the product of hydration of the acetylene bond (4d, yield of 65%) existing in solution as equilibrium between ketone and enol forms in a ratio of 1.2:1 according to NMR data (see Supporting Information File 1). Then, reactions of 5-acetylenyl-1,2,4-oxadiazole 3a–d with arenes (benzene and

Post-functionalization of drug-loaded nanoparticles prepared by polymerization-induced self-assembly (PISA) with mitochondria targeting ligands

• Janina-Miriam Noy,
• Fan Chen and
• Martina Stenzel

Beilstein J. Org. Chem. 2021, 17, 2302–2314, doi:10.3762/bjoc.17.148

• of hydrophobic groups in the surface can reduce the hydration and limit cellular uptake [51][52]. It is therefore evident that more studies such as in-depth scattering studies are needed to fully elucidate the structure of the micelle [53]. Although TPP is present, it may not be fully available on

Synthesis of O⁶-alkylated preQ₁ derivatives

• Laurin Flemmich,
• Sarah Moreno and
• Ronald Micura

Beilstein J. Org. Chem. 2021, 17, 2295–2301, doi:10.3762/bjoc.17.147

• solved by a hydration reaction sequence on a well-soluble dimethoxytritylated precursor via in situ oxime formation. The synthetic path now provides a solid foundation to access O6-alkylated 7-aminomethyl-7-deazaguanines for the development of RNA labeling tools based on the preQ1 class-I riboswitch

• aminomethyl group is accomplished by a hydration reaction sequence via in situ oxime formation. The route now provides a solid basis to generate O6-alkylated preQ1 derivatives for the development of RNA labeling tools utilizing the RNA scaffold of the preQ1 class-I riboswitch. Experimental General. Chemical

Constrained thermoresponsive polymers – new insights into fundamentals and applications

• Patricia Flemming,
• Alexander S. Münch,
• Andreas Fery and
• Petra Uhlmann

Beilstein J. Org. Chem. 2021, 17, 2123–2163, doi:10.3762/bjoc.17.138

• entropic effect characterized by negative ∆mH and ∆mS values. The essential structural feature of such polymers is their amphiphilic structure of hydrophobic domains and hydrophilic groups, which can form hydrogen bonds with water. These interactions result in a highly ordered hydration shell when the

• for ∆mH and, due to the ordered hydration structures, to a negative entropy of mixing. As soon as the turbidity temperature is reached, the hydrophobic effect becomes dominant and water molecules are released, leading to a collapse of the hydration shell and a significant increase in entropy. The

An initiator- and catalyst-free hydrogel coating process for 3D printed medical-grade poly(ε-caprolactone)

• Jochen Löblein,
• Thomas Lorson,
• Miriam Komma,
• Tobias Kielholz,
• Maike Windbergs,
• Paul D. Dalton and
• Robert Luxenhofer

Beilstein J. Org. Chem. 2021, 17, 2095–2101, doi:10.3762/bjoc.17.136

• wettability. However, both graphs also show a time-dependent wettability decrease in the first 30 min after the withdrawal from immersion which might be in consequence of a hydration loss through water evaporation. Interestingly, this tendency is only followed by the dried PHEMA-coated sample and not by the

• dried pristine PCL scaffold. An explanation for this observation might be PHEMA´s ability to absorb water as well as the relative indistinct hydration state of PCL compared to PHEMA when fully hydrated. Toluidine blue staining was used as a rapid, colorimetric readout as it selectively binds to PHEMA

Progress and challenges in the synthesis of sequence controlled polysaccharides

• Giulio Fittolani,
• Theodore Tyrikos-Ergas,
• Denisa Vargová,
• Manishkumar A. Chaube and
• Martina Delbianco

Beilstein J. Org. Chem. 2021, 17, 1981–2025, doi:10.3762/bjoc.17.129

Methodologies for the synthesis of quaternary carbon centers via hydroalkylation of unactivated olefins: twenty years of advances

• Thiago S. Silva and
• Fernando Coelho

Beilstein J. Org. Chem. 2021, 17, 1565–1590, doi:10.3762/bjoc.17.112

• donors) for the hydration of olefins in the presence of cobalt complexes (Scheme 16) [56][57][58]. These findings enabled the application of neutral conditions, instead of the basic ones that employed borohydrides [59][60][61], to generate the metal hydride species, thereby expanding the functional group

Icilio Guareschi and his amazing “1897 reaction”

• Gian Cesare Tron,
• Alberto Minassi,
• Giovanni Sorba,
• Mara Fausone and
• Giovanni Appendino

Beilstein J. Org. Chem. 2021, 17, 1335–1351, doi:10.3762/bjoc.17.93

Beyond ribose and phosphate: Selected nucleic acid modifications for structure–function investigations and therapeutic applications

• Christopher Liczner,
• Kieran Duke,
• Gabrielle Juneau,
• Martin Egli and
• Christopher J. Wilds

Beilstein J. Org. Chem. 2021, 17, 908–931, doi:10.3762/bjoc.17.76

• modifications reported by chemists along with the synthesis of 2'-deoxy-2'-fluoro-nucleosides (FRNA) [24]. The negatively charged phosphodiester linkages in the backbones of DNA and RNA are of fundamental importance for reactivity, stability, conformation and hydration [25][26]. The sugar moieties in DNA and

• '-N compared to the 4'-O and 3'-O interactions in DNA. The 3'-amino moieties in the structure’s backbone were found to coordinate a larger amount of water molecules, on both the backbone and at groove sites. This increased hydration, as well as the configuration of the 3'-amino group enables the

• -phosphate backbone relative to native phosphodiester oligomers. This N-type sugar puckering and increased hydration of the sugar phosphate backbone could also account for the triplex-favoring properties of this modification [72]. Amide While many amide backbone oligonucleotide variants exist, the focus of

Multiswitchable photoacid–hydroxyflavylium–polyelectrolyte nano-assemblies

• Alexander Zika and
• Franziska Gröhn

Beilstein J. Org. Chem. 2021, 17, 166–185, doi:10.3762/bjoc.17.17

• small counterion release may contribute (likely, it is ionic repulsion due to the excess of positive charges (l < 1.0) in combination with changes in hydration shells that make this region endotherm). The last binding step starts at l = 0.16 (molar ratio 0.075), equal to 17 monomer units per poly

Selective recognition of ATP by multivalent nano-assemblies of bisimidazolium amphiphiles through “turn-on” fluorescence response

• Rakesh Biswas,
• Surya Ghosh,
• Shubhra Kanti Bhaumik and
• Supratim Banerjee

Beilstein J. Org. Chem. 2020, 16, 2728–2738, doi:10.3762/bjoc.16.223

• multiple imidazolium groups to overcome the high hydration enthalpy of phosphates and b) the imidazolium groups are connected to aromatic moieties such as anthracene, pyrene, etc. The variation in the luminescence of the aromatic moieties signals the binding event and furthermore, they provide additional

Efficient [(NHC)Au(NTf₂)]-catalyzed hydrohydrazidation of terminal and internal alkynes

• Maximillian Heidrich and
• Herbert Plenio

Beilstein J. Org. Chem. 2020, 16, 2080–2086, doi:10.3762/bjoc.16.175

• addition product were obtained. We recently reported the excellent activity of the very bulky bispentiptycenyl-substituted (NHC)Au complexes in the hydration of terminal and internal alkynes [43] as well as in other transition-metal-catalyzed transformations [44][45]. We were now interested, whether

Syntheses of spliceostatins and thailanstatins: a review

• William A. Donaldson

Beilstein J. Org. Chem. 2020, 16, 1991–2006, doi:10.3762/bjoc.16.166

• and the amidation with 12c afforded 129. The synthesis was completed by the elimination of the 1° iodide, silyl ether cleavage, and hydration of the exocyclic enol ether. Of all the syntheses of FR901464 (1), the coupling of 91 with 48 is the most efficient sequence (6 steps, 45% yield). Nicolaou

Rearrangement of o-(pivaloylaminomethyl)benzaldehydes: an experimental and computational study

• Csilla Hargitai,
• Györgyi Koványi-Lax,
• Tamás Nagy,
• Péter Ábrányi-Balogh,
• András Dancsó,
• Gábor Tóth,
• Judit Halász,
• Angéla Pandur,
• Gyula Simig and
• Balázs Volk

Beilstein J. Org. Chem. 2020, 16, 1636–1648, doi:10.3762/bjoc.16.136

• turned out that the acid catalyst (TFA in this case), as expected, had a crucial role in the protonation and deprotonation as well as in the dehydration and hydration elementary steps of the reaction sequence. Without catalyst, the 9a→11a→4a transformations required an energy investment of 150.7 and

An overview on disulfide-catalyzed and -cocatalyzed photoreactions

• Yeersen Patehebieke

Beilstein J. Org. Chem. 2020, 16, 1418–1435, doi:10.3762/bjoc.16.118

• intermediate 51 to the phenyl thiyl radical 43 yields the intermediate 49, thiophenol, the protonated pyridine 47, and bromide. Finally, HAT from the thiophenol to the intermediate 49 gives the difluoroalkylation product 50. Alkene functionalization reactions The olefin hydration is an important method to

• synthesize alcohols, and realizing the anti-Markovnikov regioselectivity is extremely challenging. In 2017, Lei and co-workers reported a class of disulfide-cocatalyzed anti-Markovnikov olefin hydration reactions [24]. In this reaction, 9-mesityl-10-methylacridinium (Acr+–Mes–ClO4−) and diphenyl disulfide

• disulfide. Disulfide-cocatalyzed anti-Markovnikov olefin hydration reactions. Disulfide-catalyzed decarboxylation of carboxylic acids. Proposed mechanism of the disulfide-catalyzed decarboxylation of carboxylic acids. Disulfide-catalyzed decarboxylation of carboxylic acids. Disulfide-catalyzed conversion of

Recent applications of porphyrins as photocatalysts in organic synthesis: batch and continuous flow approaches

• Rodrigo Costa e Silva,
• Luely Oliveira da Silva,
• Aloisio de Andrade Bartolomeu,
• Timothy John Brocksom and
• Kleber Thiago de Oliveira

Beilstein J. Org. Chem. 2020, 16, 917–955, doi:10.3762/bjoc.16.83

• hydration of terminal alkynes to ketones can be photocatalyzed by rhodium(III) tetrakis(p-sulfonylphenyl)porphyrin (RhIIITSPP) [37]. The coupling between RhIII(TSPP) and terminal alkynes produced the β-carbonylalkylrhodium porphyrin as a photoactive intermediate, whose irradiation produced the PhCOCH2

• tetrahydroquinolines by reductive quenching. Selenylation and thiolation of anilines. NiTPP as photoredox catalyst in oxidative and reductive quenching, in comparison with other photocatalysts. C–O bond cleavage of 1-phenylethanol using a cobalt porphyrin (CoTMPP) under visible light. Hydration of terminal alkynes by

Chemical tuning of photoswitchable azobenzenes: a photopharmacological case study using nicotinic transmission

• Lorenzo Sansalone,
• Jun Zhao,
• Matthew T. Richers and
• Graham C. R. Ellis-Davies

Beilstein J. Org. Chem. 2019, 15, 2812–2821, doi:10.3762/bjoc.15.274

• nitrosonium tetrafluoroborate gave 8 (54% yield). The two parts of the chromophore were coupled starting by treatment of 5 with n-butyllithium at −78 °C, which was coupled in situ with 8 to AB 9 (17% yield). Copper-catalyzed hydration of 9 gave amide 10, which was treated with TBAF to alcohol 11 in 42

Iodine-mediated hydration of alkynes on keto-functionalized scaffolds: mechanistic insight and the regiospecific hydration of internal alkynes

• Zachary Lee,
• Brandon R. Jones,
• Nyochembeng Nkengbeza,
• Michael Phillips,
• Kayla Valentine,
• Alexis Stewart,
• Brandon Sellers,
• Nicholas Shuber and
• Karelle S. Aiken

Beilstein J. Org. Chem. 2019, 15, 2747–2752, doi:10.3762/bjoc.15.265

• hydration reaction of alkynes serves as a green alternative to metal-catalyzed procedures. Previous work has shown that this method works well with terminal alkynes on keto-functionalized scaffolds, including 1,3-dicarbonyls and their heteroatom analogues. It was hypothesized that the reaction proceeds

• through a 5-exo-dig neighboring group participation (NGP) cyclization and an α-iodo intermediate. The work described herein probes the existence of the intermediate through NMR investigations and explores the scope of the hydration process with internal alkynes. The NMR experiments confirm the existence

• of the α-iodo intermediate, and methodology studies demonstrate that alkyl-capped, asymmetric, internal alkynes undergo a regiospecific hydration, also via the 5-exo-dig NGP pathway. Keywords: α-iodo intermediate; internal alkyne; iodine-mediated hydration; neighboring group participation

Inherent atomic mobility changes in carbocation intermediates during the sesterterpene cyclization cascade

• Hajime Sato,
• Takaaki Mitsuhashi,
• Mami Yamazaki,
• Ikuro Abe and
• Masanobu Uchiyama

Beilstein J. Org. Chem. 2019, 15, 1890–1897, doi:10.3762/bjoc.15.184

• ) triggering the biosynthetic cyclization cascade by the elimination of pyrophosphate or by protonation; (ii) preorganization of the substrate to generate the reactive conformation; (iii) protection of reactive intermediates from water; and (iv) termination of the reaction by deprotonation or hydration. We

• sesterfisherol biosynthesis. Sesterfisherol is formed by the hydration of IM11. Phase (I): 5/12/5 tricycle formation is highlighted in blue. Phase (II): conformational changes and hydrogen shifts are highlighted in orange. Phase (III): ring rearrangements are highlighted in yellow. Supporting Information

A metal-free approach for the synthesis of amides/esters with pyridinium salts of phenacyl bromides via oxidative C–C bond cleavage

• Kesari Lakshmi Manasa,
• Yellaiah Tangella,
• Namballa Hari Krishna and
• Mallika Alvala

Beilstein J. Org. Chem. 2019, 15, 1864–1871, doi:10.3762/bjoc.15.182

• ], rearrangement of aldoximes [18], hydration of nitriles [19], dehydrogenative coupling of primary alcohols with amines [20][21] and hydration of organonitriles to amides [22][23][24]. However, these traditional methods have certain disadvantages such as generation of toxic chemical waste, involvement of tedious

Water inside β-cyclodextrin cavity: amount, stability and mechanism of binding

• Stiliyana Pereva,
• Valya Nikolova,
• Silvia Angelova,
• Tony Spassov and
• Todor Dudev

Beilstein J. Org. Chem. 2019, 15, 1592–1600, doi:10.3762/bjoc.15.163

• water clusters in the interior of β-CD and what type of interactions between water molecules and cavity walls or between the water molecules themselves are dominating the energetics of the β-CD hydration? (3) What is the maximum number of water molecules inside the cavity of β-CD? (4) How do the

• thermodynamic characteristics of β-CD hydration compare with those of its smaller α-cyclodextrin (α-CD) counterpart? In this study, we address these questions by employing a combination of experimental (DSC/TG) and theoretical (DFT) approaches. Keywords: β-cyclodextrin; DFT calculations; DSC/TG experiments

• ; hydration; macrocycles; thermodynamic characteristics; Introduction Cyclodextrins (CDs), a family of enzymatically modified starches, are widely used as host macrocycles in forming inclusion complexes with various molecular entities of interest to food industry, pharmacology, cosmetics, catalysis, and

Synthesis and conformational preferences of short analogues of antifreeze glycopeptides (AFGP)

• Małgorzata Urbańczyk,
• Michał Jewgiński,
• Joanna Krzciuk-Gula,
• Jerzy Góra,
• Rafał Latajka and
• Norbert Sewald

Beilstein J. Org. Chem. 2019, 15, 1581–1591, doi:10.3762/bjoc.15.162

• into the ice lattice [12], others investigated the adsorption process on different surfaces via atomic force microscopy [10][13][14]. The antifreeze activity has been correlated with long-range perturbation of hydration dynamics [15]. Latest molecular dynamics simulations suggest that AFGP reversibly