Synthesis of a novel aminobenzene-containing hemicucurbituril and its fluorescence spectral properties with ions

• Qingkai Zeng,
• Qiumeng Long,
• Jihong Lu,
• Li Wang,
• Yuting You,
• Xiaoting Yuan,
• Qianjun Zhang,
• Qingmei Ge,
• Hang Cong and
• Mao Liu

Beilstein J. Org. Chem. 2021, 17, 2840–2847, doi:10.3762/bjoc.17.195

• constants for 1:1 complexation between the host 4 and the guest cations were calculated by Equation 1 [47], where Ka is the association constant of the host–guest interaction, while ΔI is the change in the fluorescence intensity of the host upon gradual addition of the guest, and Δa refers to the different

Biological properties and conformational studies of amphiphilic Pd(II) and Ni(II) complexes bearing functionalized aroylaminocarbo-N-thioylpyrrolinate units

• Samet Poyraz,
• Samet Belveren,
• Sabriye Aydınoğlu,
• Mahmut Ulger,
• Abel de Cózar,
• Maria de Gracia Retamosa,
• Jose M. Sansano and
• H. Ali Döndaş

Beilstein J. Org. Chem. 2021, 17, 2812–2821, doi:10.3762/bjoc.17.192

• complexation. NH (amide) protons of the ligands located at 8.30–7.65 ppm were not detected in the metallic structure spectra. Signals in the ranges of 5.84–5.64 and 4.40–4.17 ppm, corresponding to H5 and H6 protons, respectively, were shifted to 5.44 (H5) and 4.19 (H6) ppm for L1-Ni, and to 5.56–5.48 and 4.29

Synthetic strategies toward 1,3-oxathiolane nucleoside analogues

• Umesh P. Aher,
• Dhananjai Srivastava,
• Girij P. Singh and
• Jayashree B. S

Beilstein J. Org. Chem. 2021, 17, 2680–2715, doi:10.3762/bjoc.17.182

• stereoselective N-glycosylation. We hypothesize that because of the Lewis acid character, ZrCl4 could most likely form a precomplex with the sulfur atom of the oxathiolane ring, as in IV. The presence of the chiral ʟ-menthyl ester auxiliary function assists the complexation with ZrCl4 in a specific orientation

α-Ketol and α-iminol rearrangements in synthetic organic and biosynthetic reactions

• Scott Benz and
• Andrew S. Murkin

Beilstein J. Org. Chem. 2021, 17, 2570–2584, doi:10.3762/bjoc.17.172

• with diverse biological activities [17]. The key step first involved the rhodium carbenoid-mediated OH insertion/Claisen rearrangement following complexation of diazoester 56 and allylic alcohol 57 to produce intermediate 58 (Figure 13). Addition of BF3·OEt2 to the reaction mixture then catalyzed the α

Targeting active site residues and structural anchoring positions in terpene synthases

• Anwei Hou and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2021, 17, 2441–2449, doi:10.3762/bjoc.17.161

• activity, while for the wildtype no GGPP conversion is observed. These findings will assist in future protein engineering for improved activity and functional switches in other microbial terpene synthases. Highly conserved residues in the active site of SdS for Mg2+ complexation, substrate recognition and

Halides as versatile anions in asymmetric anion-binding organocatalysis

• Lukas Schifferer,
• Martin Stinglhamer,
• Kirandeep Kaur and
• Olga García Macheño

Beilstein J. Org. Chem. 2021, 17, 2270–2286, doi:10.3762/bjoc.17.145

• enantioselectivity, but the catalyst itself accommodates the anion by adopting a helical conformation upon complexation (Scheme 18a) [84][85][86]. Initial studies proved these systems highly effective for the enantioselective Reissert reaction of quinolines with silyl ketene acetals [22], which could be later

Constrained thermoresponsive polymers – new insights into fundamentals and applications

• Patricia Flemming,
• Alexander S. Münch,
• Andreas Fery and
• Petra Uhlmann

Beilstein J. Org. Chem. 2021, 17, 2123–2163, doi:10.3762/bjoc.17.138

• irradiation as well as by host molecule (α-cyclodextrin) complexation [278]. Due to the high number of proton acceptor/donor sites, ureido-modified copolymers such as poly(allylamine-co-allylurea) are also becoming more and more important. The critical phase transition temperature can often be finely tuned

Development of N-F fluorinating agents and their fluorinations: Historical perspective

• Teruo Umemoto,
• Yuhao Yang and
• Gerald B. Hammond

Beilstein J. Org. Chem. 2021, 17, 1752–1813, doi:10.3762/bjoc.17.123

N-tert-Butanesulfinyl imines in the asymmetric synthesis of nitrogen-containing heterocycles

• Joseane A. Mendes,
• Paulo R. R. Costa,
• Miguel Yus,
• Francisco Foubelo and
• Camilla D. Buarque

Beilstein J. Org. Chem. 2021, 17, 1096–1140, doi:10.3762/bjoc.17.86

• ) to promote the complexation with the Grignard reagent. Products 147 and 149 were obtained in excellent yields and high diastereoselectivity and when 4-methylmorpholine (NMM) was used as additive, the heterocycle 151 was obtained in one pot addition–cyclization–deprotection of imine 150 (Scheme 40

Recent advances in palladium-catalysed asymmetric 1,4–additions of arylboronic acids to conjugated enones and chromones

• Jan Bartáček,
• Jan Svoboda,
• Martin Kocúrik,
• Jaroslav Pochobradský,
• Alexander Čegan,
• Miloš Sedlák and
• Jiří Váňa

Beilstein J. Org. Chem. 2021, 17, 1048–1085, doi:10.3762/bjoc.17.84

• . At first, they tested in situ-generated complexes of L14 and Pd(TFA)2 in methanol or acetone, but the reduction to catalytically inactive Pd(0) occurred faster. The reoxidation by Cu(BF4)2·6H2O led to the loss of enantioselectivity presumably because of the complexation of the bisoxazoline by Cu(II

Synthetic accesses to biguanide compounds

• Oleksandr Grytsai,
• Cyril Ronco and
• Rachid Benhida

Beilstein J. Org. Chem. 2021, 17, 1001–1040, doi:10.3762/bjoc.17.82

• chemical function, which has attracted much attention a century ago and is showing resurgent interest in recent years after a long period of dormancy. This class of compounds has found broad applications such as reaction catalysts, organic strong bases, ligands for metal complexation, or versatile starting

• ], superbases [6], and as ligands for metal complexation [7]. In organic synthesis, biguanides are precursors to several heterocycles [1] such as 1,3,5-triazines, pyrimidines, boron heterocycles, and benzo[f]quinazolines. The application of biguanides as catalysts has been reported mostly for the

• structures to handle: their hydrogen-bonding and complexation properties complicate their isolation and purification, and the numerous tautomeric forms and partially exchangeable protons render the analysis sometimes tricky. Mostly, biguanides suffer from an evident lack of knowledge and efficient procedures

Synthesis of 10-O-aryl-substituted berberine derivatives by Chan–Evans–Lam coupling and investigation of their DNA-binding properties

• Peter Jonas Wickhorst,
• Mathilda Blachnik,
• Denisa Lagumdzija and
• Heiko Ihmels

Beilstein J. Org. Chem. 2021, 17, 991–1000, doi:10.3762/bjoc.17.81

• DNA (Kb = 3–5 × 104 M−1) and exhibited a fluorescence light-up effect upon complexation to both DNA forms, with slightly higher intensity in the presence of the quadruplex DNA. Furthermore, the CD- and LD-spectroscopic studies revealed that the title compounds intercalate into ct DNA and bind to G4

• , it has been found that berberine (1a) exhibits a selective cytotoxicity against cancer cells [12][13], which is mainly based on its DNA-binding properties [14]. Since the complexation with DNA leads to significant changes of the fluorescent quantum yields of the bound berberine, it can also be used

• between DNA base pairs and the isoquinolinium unit pointing into the groove. This model is further supported by the relatively low fluorescence quantum yields of all ligands upon complexation to duplex DNA because in this structure the aryl substituent still has some conformational flexibility in the

Enhanced target cell specificity and uptake of lipid nanoparticles using RNA aptamers and peptides

• Roslyn M. Ray,
• Anders Højgaard Hansen,
• Maria Taskova,
• Bernhard Jandl,
• Jonas Hansen,
• Citra Soemardy,
• Kevin V. Morris and
• Kira Astakhova

Beilstein J. Org. Chem. 2021, 17, 891–907, doi:10.3762/bjoc.17.75

• average sizes of 57.3 nm and 91.9 nm, respectively, as well as a more negative ZP (−11 mV and −9.4 mV, respectively, Table 2). These ZP values indicate that complexation leads from a neutral to anionic LNP product [39], a property that typically confers with low to no cytotoxicity in vivo [40]. Further

• complexation with cluster of differentiation 4 (CD4) and CCR5 or C-X-C motif chemokine receptor 4 (CXCR4) host cell surface receptors [35]. As such, gp160 expression on the host cell surface receptor may not be as adept at facilitating cell entry via receptor-mediated endocytosis. Although in 2009, Zhou et al

[2 + 1] Cycloaddition reactions of fullerene C₆₀ based on diazo compounds

• Yuliya N. Biglova

Beilstein J. Org. Chem. 2021, 17, 630–670, doi:10.3762/bjoc.17.55

• biologically active molecules that already find practical use. It has been found that complexation improves the transportation of a drug and prolongs its effect, and a synergistic effect is observed in some cases [36]. The situation with covalent binding in fullerene–drug conjugates is different. C60 is an

Amino- and polyaminophthalazin-1(2H)-ones: synthesis, coordination properties, and biological activity

• Zbigniew Malinowski,
• Emilia Fornal,
• Agata Sumara,
• Renata Kontek,
• Karol Bukowski,
• Beata Pasternak,
• Dariusz Sroczyński,
• Joachim Kusz,
• Magdalena Małecka and
• Monika Nowak

Beilstein J. Org. Chem. 2021, 17, 558–568, doi:10.3762/bjoc.17.50

• properties of selected aminophthalazinones towards Cu(II) ions were investigated and the participation of the nitrogen atoms in the complexation of the metal ion was shown. A biological screening of the potential cytotoxicity of selected synthesized compounds on HT-29 and PC-3 cell lines, as well as on the L

• observed. Instead, the partial demethylation of the amine occurred. As a result, a mixture of the products 6c and 6d (molar ratio 6c/6d = 1:4) was obtained. With the increase in the amount of palladium (15 mol %) the phthalazin-1(2H)-one derivative 6d was obtained as the main product (70%). Complexation

• . Proposed catalytic cycles for the amination of 4-bromophthalazinones of type 3 (Phthal: phthalazinone, PhthalBr: 4-bromophthalazinone, PhthalNR1R2: 4-aminophthalazinone). The phthalazinone derivatives that were used to test the complexation of Cu(II) ions. Structure of complex 17. Molecular structure of

Metal-free visible-light-enabled vicinal trifluoromethyl dithiolation of unactivated alkenes

• Xiaojuan Li,
• Qiang Zhang,
• Weigang Zhang,
• Jinzhu Ma,
• Yi Wang and
• Yi Pan

Beilstein J. Org. Chem. 2021, 17, 551–557, doi:10.3762/bjoc.17.49

• complexation of the intermediate I with K2HPO4 provides the intermediate II. Then, 4CzIPN* (4CzIPN+/4CzIPN*: E1/2red = −1.04 V vs SCE) [51] reduces the intermediate II to generate a phthalimide anion (Phth− [50]) and a trifluoromethylthio radical under irradiation. The SCF3 radical readily reacts with the

Mesoionic tetrazolium-5-aminides: Synthesis, molecular and crystal structures, UV–vis spectra, and DFT calculations

• Vladislav A. Budevich,
• Sergei V. Voitekhovich,
• Alexander V. Zuraev,
• Vadim E. Matulis,
• Vitaly E. Matulis,
• Alexander S. Lyakhov,
• Ludmila S. Ivashkevich and
• Oleg A. Ivashkevich

Beilstein J. Org. Chem. 2021, 17, 385–395, doi:10.3762/bjoc.17.34

• -aminide ligand in a manganese complex [29], being the only structurally characterized complex with a neutral 1,3-dialkyltetrazolium-5-aminide. Therefore, it is of interest to compare the structural data for this compound with those obtained for compound 8a to find the influence of the complexation on the

• the exocyclic C5–N5 bond is longer compared to aminide 8a. One can expect that these structural differences are due to the complexation. It should be noted that the bond lengths of the tetrazole ring N11/C15 in compound 11a are usual for 1- and 1,5-substituted tetrazoles. The compounds 8a, 10, and 11a

• their complexation. In salt 9, the bromide ions are held in the crystal structure by hydrogen bonds N15–H15···Br1b [D···A = 3.2774(17) Å, D–H···A = 142°; symmetry code: (b) –x + y + 1/3, −x + 2/3, z + 2/3] and N25–H25···Br2 (D···A = 3.2654(17) Å, D–H···A = 144°). There are also intramolecular hydrogen

¹⁹F NMR as a tool in chemical biology

• Diana Gimenez,
• Aoife Phelan,
• Cormac D. Murphy and
• Steven L. Cobb

Beilstein J. Org. Chem. 2021, 17, 293–318, doi:10.3762/bjoc.17.28

Insight into functionalized-macrocycles-guided supramolecular photocatalysis

• Minzan Zuo,
• Krishnasamy Velmurugan,
• Kaiya Wang,
• Xueqi Tian and
• Xiao-Yu Hu

Beilstein J. Org. Chem. 2021, 17, 139–155, doi:10.3762/bjoc.17.15

• structural rigidity caused by supramolecular host–guest complexation, ii) that a restricted space, size, and volume could lead to three-dimensional translation (rotation, vibration, and translation) of the guests within the host cavities, and iii) the dynamic properties of the guest within the supramolecular

• , Yagi, et al. reported that the visible-light-driven hydrogen evolution of the supramolecular system could be achieved by the host–guest complexation between the cobaloxime CoPyS and γ-CD (Figure 10) [30]. Upon visible-light irradiation, the CoPyS:γ-CD 1:1 complex exhibited an enhanced photocatalytic H2

Tuning the solid-state emission of liquid crystalline nitro-cyanostilbene by halogen bonding

• Subrata Nath,
• Alexander Kappelt,
• Matthias Spengler,
• Bibhisan Roy,
• Jens Voskuhl and
• Michael Giese

Beilstein J. Org. Chem. 2021, 17, 124–131, doi:10.3762/bjoc.17.13

• studies of NO2-C9∙∙∙F4St. The photographs of the solid components as well as the formed complex under UV light irradiation (λex = 365 nm) reveal the change in fluorescent intensity upon complexation (a); fluorescence intensity plot as a function of the temperature upon heating from room temperature to 110

All-carbon [3 + 2] cycloaddition in natural product synthesis

• Zhuo Wang and
• Junyang Liu

Beilstein J. Org. Chem. 2020, 16, 3015–3031, doi:10.3762/bjoc.16.251

• -unsaturated enone to afford conidiogenone B (171) in 32% yield upon treatment with RhCl3 in microwave. The reaction mechanism of Danheiser’s [3 + 2] annulation is shown according to the Danheiser’s proposal [74] (Scheme 13C, inset). Initial complexation of the α,β-unsaturated ketone 167 and titanium

Chiral anion recognition using calix[4]arene-based ureido receptors in a 1,3-alternate conformation

• Tereza Horáčková,
• Jan Budka,
• Vaclav Eigner,
• Wen-Sheng Chung,
• Petra Cuřínová and
• Pavel Lhoták

Beilstein J. Org. Chem. 2020, 16, 2999–3007, doi:10.3762/bjoc.16.249

• for N-acetyl-ʟ-phenylalaninate. The structures of some receptors were confirmed by single crystal X-ray analysis. Keywords: anion recognition; calixarene; chiral receptor; complexation; enantiodiscrimination; Introduction The recognition and complexation of anions has become undoubtedly one of the

• highly sophisticated molecules, including anionic receptors [27][28][29][30][31][32][33][34][35][36][37][38][39]. During our ongoing research on anion complexation, we have reported various calix[4]arene receptors based mainly on amide, urea, or thiourea groups [40][41], some of which are available in

• different conformations. Although the overwhelming majority of calixarene-based receptors makes use of the cone conformer A (Figure 1), the corresponding diureidocalix[4]arenes in the 1,3-alternate conformation B showed [42][43] surprisingly good complexation abilities towards selected anions. Especially

Construction of pillar[4]arene[1]quinone–1,10-dibromodecane pseudorotaxanes in solution and in the solid state

• Xinru Sheng,
• Errui Li and
• Feihe Huang

Beilstein J. Org. Chem. 2020, 16, 2954–2959, doi:10.3762/bjoc.16.245

• 450001, P. R. China 10.3762/bjoc.16.245 Abstract We report novel pseudorotaxanes based on the complexation between pillar[4]arene[1]quinone and 1,10-dibromodecane. The complexation is found to have a 1:1 host–guest complexation stoichiometry in chloroform but a 2:1 host–guest complexation stoichiometry

• reports [44][45]. We found that H and G can be used to build a [3]pseudorotaxane in the solid state but a [2]pseudorotaxane in solution. Results and Discussion Host–guest complexation in the solid state Cocrystals of H and G were obtained by slow evaporation of the solution in methanol. The X-ray

• the hydrogen atoms on the ethoxy groups. It is worth mentioning that we did not find any interaction of the benzoquinone subunit of the host with the guest molecule. Host–guest complexation in solution In order to further study the host–guest binding properties of H and G, we explored the complexation

Ultrasound-assisted Strecker synthesis of novel 2-(hetero)aryl-2-(arylamino)acetonitrile derivatives

• Emese Gal,
• Luiza Gaina,
• Hermina Petkes,
• Alexandra Pop,
• Castelia Cristea,
• Gabriel Barta,
• Dan Cristian Vodnar and
• Luminiţa Silaghi-Dumitrescu

Beilstein J. Org. Chem. 2020, 16, 2929–2936, doi:10.3762/bjoc.16.242

• -benzoxazole [13] or different other acetohydrazines [14], complexation of phenothiazinyl-chalcone using diiron nonacarbonyl [15], and regioselective oxidation [16]. α-Aminonitriles are versatile synthetic intermediates that are readily obtainable by a Strecker reaction involving the addition of a cyanide

UV resonance Raman spectroscopy of the supramolecular ligand guanidiniocarbonyl indole (GCI) with 244 nm laser excitation

• Tim Holtum,
• Vikas Kumar,
• Daniel Sebena,
• Jens Voskuhl and
• Sebastian Schlücker

Beilstein J. Org. Chem. 2020, 16, 2911–2919, doi:10.3762/bjoc.16.240

• (CBS) [6][7][8][9]. The GCP takes part selectively and efficiently in the complexation of carboxylates based on the electrostatic interaction between the positively charged CBS and the negatively charged carboxylate in the combination with hydrogen bonding, enabling molecular recognition even in the

• strengths. Various spectroscopic techniques can be employed for monitoring these changes. For example, electronic absorption or fluorescence spectroscopy can probe the spectral differences due to the complexation of the supramolecular ligand with a peptide or protein. However, electronic spectroscopies

• receptor. The vibrational assignment of these modes is important for the binding study of GCI receptors because we hypothesize that they are all involved in the complexation with carboxylates. Finally, we employed UVRR spectroscopy at 244 nm excitation to observe the binding events of GCI-based receptors