Germacrene B – a central intermediate in sesquiterpene biosynthesis

• Houchao Xu and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2023, 19, 186–203, doi:10.3762/bjoc.19.18

• assignments and even error propagation, and shows the importance of structure elucidation by classical methods, i.e., isolation and compound characterisation by NMR spectroscopy and determination of optical rotation. Compound 51 can be generated biosynthetically from I3a through 1,2-methyl migration to I3b

1,4-Dithianes: attractive C2-building blocks for the synthesis of complex molecular architectures

• Bram Ryckaert,
• Ellen Demeyere,
• Frederick Degroote,
• Hilde Janssens and
• Johan M. Winne

Beilstein J. Org. Chem. 2023, 19, 115–132, doi:10.3762/bjoc.19.12

• pioneered by Parham and co-workers to be the most suited (Scheme 4, 12 → 2) [28][29][30]. Parham described a ring expansion of 1,3-dithiolanes derived from α-halocarbonyls into the 1,4-dithianes which then dehydrohalogenate to afford dihydrodithiins. The ring expansion involves a 1,2-sulfur migration of a β

• the relative stereochemistry (Scheme 17) [108][109]. 6 Synthetic equivalents of vinyl carbenes in (2 + 1) cycloadditions: Au(I)-catalyzed generation of 1,4-dithiane-fused vinylcarbene species In 2007, Wang and co-workers reported a gold-catalyzed Parham-type 1,2-sulfur migration to generate in situ a

• during our (formal) total synthesis of (±)-cephalotaxine (130, Scheme 20b) [112]. Here, the desired desulfurization of a 1,4-dithiane could not be achieved without concomitant migration of an alkene double bond (viz 127 → 128), making the final steps to complete the synthesis quite cumbersome, as at best

Combining the best of both worlds: radical-based divergent total synthesis

• Kyriaki Gennaiou,
• Antonios Kelesidis,
• Maria Kourgiantaki and
• Alexandros L. Zografos

Beilstein J. Org. Chem. 2023, 19, 1–26, doi:10.3762/bjoc.19.1

• a semipinacol rearrangement leading to 95, followed by subsequent cyclization to natural products guignardone A (96) and C (97). This process involved 1,2-allyl migration and C–O bond formation through a semipinacol rearrangement and a cyclodehydration cascade reaction (Scheme 8). Following the same

Total synthesis of grayanane natural products

• Nicolas Fay,
• Rémi Blieck,
• Cyrille Kouklovsky and
• Aurélien de la Torre

Beilstein J. Org. Chem. 2022, 18, 1707–1719, doi:10.3762/bjoc.18.181

• cyclization based on a bridgehead tertiary carbocation intermediate forging the B ring; iii) redox manipulations and a 1,2-migration as final steps. The synthesis started from (S)-ketone 44 which was prepared via asymmetric CBS reduction of diketone 26 (Scheme 7). Firstly, this (S)-ketone 44 was transformed

Redox-active molecules as organocatalysts for selective oxidative transformations – an unperceived organocatalysis field

• Elena R. Lopat’eva,
• Igor B. Krylov,
• Dmitry A. Lapshin and
• Alexander O. Terent’ev

Beilstein J. Org. Chem. 2022, 18, 1672–1695, doi:10.3762/bjoc.18.179

• chiral copper complex. An extraordinary example of an asymmetric difluorination of alkenes with the migration of aryl or methyl groups was shown using a chiral aryl iodide catalyst [149][150] (Scheme 35). Depending on the nature of the migrating group, two mechanisms are possible that determine the

• -organocatalyzed vinylarene diamination. Iodoarene-organocatalyzed asymmetric CH-hydroxylation of benzylic substrates. Iodoarene-organocatalyzed asymmetric difluorination of alkenes with migration of aryl or methyl groups. Examples of 1,2-diiodo-4,5-dimethoxybenzene-catalyzed electrochemical oxidative

Preparation of β-cyclodextrin-based dimers with selectively methylated rims and their use for solubilization of tetracene

• Konstantin Lebedinskiy,
• Volodymyr Lobaz and
• Jindřich Jindřich

Beilstein J. Org. Chem. 2022, 18, 1596–1606, doi:10.3762/bjoc.18.170

• selectively methylated rims The important part of this work was proving the structure of the synthesized compounds because we worked with non-symmetrical CDs; moreover, we used protection–deprotection methods for partial methylation, so we could expect a cleavage or even migration of protective groups

Computational model predicts protein binding sites of a luminescent ligand equipped with guanidiniocarbonyl-pyrrole groups

• Neda Rafieiolhosseini,
• Matthias Killa,
• Thorben Neumann,
• Niklas Tötsch,
• Jean-Noël Grad,
• Alexander Höing,
• Thies Dirksmeyer,
• Jochen Niemeyer,
• Christian Ottmann,
• Shirley K. Knauer,
• Michael Giese,
• Jens Voskuhl and
• Daniel Hoffmann

Beilstein J. Org. Chem. 2022, 18, 1322–1331, doi:10.3762/bjoc.18.137

• enormous number of interactions with other proteins. Currently, more than 200 interacting proteins are known. 14-3-3 proteins play a significant role in cell signaling [2][3] and they were found to be essential in processes such as differentiation, apoptosis, or migration [4]. 14-3-3 proteins also play a

Modular synthesis of 2-furyl carbinols from 3-benzyldimethylsilylfurfural platforms relying on oxygen-assisted C–Si bond functionalization

• Sebastien Curpanen,
• Per Reichert,
• Gabriele Lupidi,
• Giovanni Poli,
• Julie Oble and
• Alejandro Perez-Luna

Beilstein J. Org. Chem. 2022, 18, 1256–1263, doi:10.3762/bjoc.18.131

• alkoxides We first contemplated the possibility to promote C3–Si bond functionalization through intramolecular activation by alkoxides [15]. It was reported that lithium alkoxides A undergo 1,4-silyl migration (Brook rearrangement) to generate C2-lithiated furans C, which in turn can react in the presence

• from E, and thus affording the C3-lithiated furan derivative G upon 1,4-silyl migration as well as the electrophilic substitution product H in the presence of an appropriate electrophile (Scheme 3, bottom). However, treatment of aldehyde 1b with n-BuLi, followed by addition of benzaldehyde in THF/DMPU

• [25], afforded only the addition product 3b without any detectable formation of product 9, expected from 1,4-silyl migration/electrophilic substitution of 8 (Scheme 4, top). Conversely, treatment of alcohol 3a with t-BuOCu in the presence of allyl chloride, according to conditions developed by Takeda

A Streptomyces P450 enzyme dimerizes isoflavones from plants

• Run-Zhou Liu,
• Shanchong Chen and
• Lihan Zhang

Beilstein J. Org. Chem. 2022, 18, 1107–1115, doi:10.3762/bjoc.18.113

• biocatalytic dimerization reactions [20]. Contrary to flavone dimers and oligomers being abundant in nature, only limited dimeric compounds have been reported for isoflavones. Isoflavones bear a characteristic 3-phenylchroman skeleton, which is formed by the B-ring migration from the flavonoid scaffold

Inductive heating and flow chemistry – a perfect synergy of emerging enabling technologies

• Conrad Kuhwald,
• Sibel Türkhan and
• Andreas Kirschning

Beilstein J. Org. Chem. 2022, 18, 688–706, doi:10.3762/bjoc.18.70

• , yielding a reduced arylation product 77 [86][87]. Mechanistically, either diazo or carbene intermediates can be proposed, as Barluenga has outlined, and migration of the aryl group leads to an alkylboronic acid, which is hydrolyzed by protodeboronation, yielding the arylation product 77. A two-step flow

Unusual highly diastereoselective Rh(II)-catalyzed dimerization of 3-diazo-2-arylidenesuccinimides provides access to a new dibenzazulene scaffold

• Anastasia Vepreva,
• Alexander S. Bunev,
• Andrey Yu. Kudinov,
• Grigory Kantin,
• Mikhail Krasavin and
• Dmitry Dar’in

Beilstein J. Org. Chem. 2022, 18, 533–538, doi:10.3762/bjoc.18.55

• hydrogen shift. Indene C can either convert into the final indene 3a via a slow 1,3-migration of the hydrogen atom, or is intercepted by carbene A with the formation of cyclopropane D. The relative rates of these competing processes likely determine the composition of the final product mixture. The

• intermediate D into cycloheptadiene E is an example of a relatively rare reaction of the cyclopropane-ring expansion through a 1,5-C‒C bond migration [15][16][17]. This concerted process is followed by yet another 1,5-migration of the hydrogen atom, leading to the final dimer 2a. The formation of a single

Menadione: a platform and a target to valuable compounds synthesis

• Acácio S. de Souza,
• Ruan Carlos B. Ribeiro,
• Dora C. S. Costa,
• Fernanda P. Pauli,
• David R. Pinho,
• Matheus G. de Moraes,
• Fernando de C. da Silva,
• Luana da S. M. Forezi and
• Vitor F. Ferreira

Beilstein J. Org. Chem. 2022, 18, 381–419, doi:10.3762/bjoc.18.43

• )ruthenium(II) dichloride as catalyst. Then, a BF3·OEt2-catalzyed migration of the methyl group to the C-2 position and removal of the tert-butoxy group in a 1,1,1,3,3,3-hexafluoroisopropanol (HFIP)/toluene mixture afforded 2-methyl-1,4-benzoquinone (29). Finally, a Diels–Alder reaction was performed with

Iridium-catalyzed hydroacylation reactions of C1-substituted oxabenzonorbornadienes with salicylaldehyde: an experimental and computational study

• Angel Ho,
• Austin Pounder,
• Krish Valluru,
• Leanne D. Chen and
• William Tam

Beilstein J. Org. Chem. 2022, 18, 251–261, doi:10.3762/bjoc.18.30

• explanation towards the sole production of the experimentally observed anti-acylated product 15. Although Weller and co-workers have elegantly demonstrated hydride migration, rather than the alternative carbometalation, occurs during rhodium-catalyzed intermolecular alkyne hydroacylation [78], no such

• experiment has been carried out under iridium catalysis. As such, we set out to explore the possibility acyl migration is favored over hydride migration in iridium-catalyzed hydroacylation reactions (Figure 2). Beginning with the two exo-η2-coordinated intermediates IN1a and IN1b, two possible transition

• states for the acyl migration, which exhibit a distorted Ir–C–C’–C’’ four-membered ring geometry, can be located. Directly comparing the hydrometalation process (Figure 1) to the carbometalation process, we see that acyl migration is unfavored, exhibiting activation energies of 19.2 (1bTS2d) to 20.7

Trichloroacetic acid fueled practical amine purifications

• Aleena Thomas,
• Baptiste Gasch,
• Enzo Olivieri and
• Adrien Quintard

Beilstein J. Org. Chem. 2022, 18, 225–231, doi:10.3762/bjoc.18.26

• 1). Presence of TCA in the 1H NMR spectra is easily monitored through a broad peak around 9 ppm and also through the upfield migration of the other peaks of the amine ammonium salt. Heating the amine salt precipitate neat at 100 °C also provided partial decarboxylation (Table 1, entry 2). In sharp

The enzyme mechanism of patchoulol synthase

• Houchao Xu,
• Bernd Goldfuss,
• Gregor Schnakenburg and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2022, 18, 13–24, doi:10.3762/bjoc.18.2

• migration from C to D in Scheme 1A), and a Wagner–Meerwein rearrangement to G. The final steps are identical to those in Akhila’s mechanism (Scheme 2A). This work also reported on a labelling experiment with (2-2H)FPP that was enzymatically converted with PTS with incorporation of deuterium at C2 of 3

• Information File 1). Notably, not only the double deuterium uptake into 3 from D2O, but also the loss of deuterium from (6-2H)FPP contradicts the mechanisms of Scheme 1 and Scheme 3 that both propose a migration of hydrogen from C6 to C3, either through a 1,4- or a 1,3-hydride shift. An additional experiment

The ethoxycarbonyl group as both activating and protective group in N-acyl-Pictet–Spengler reactions using methoxystyrenes. A short approach to racemic 1-benzyltetrahydroisoquinoline alkaloids

• Marco Keller,
• Karl Sauvageot-Witzku,
• Franz Geisslinger,
• Nicole Urban,
• Michael Schaefer,
• Karin Bartel and
• Franz Bracher

Beilstein J. Org. Chem. 2021, 17, 2716–2725, doi:10.3762/bjoc.17.183

• , antitumor, and antiviral effects [15]. Mechanistically, they have been shown to block two pore channel 2 (TPC2), an endolysosomal cation channel which is important for cellular migration and survival [6][15][46][47]. In our recent search for TPC2 blockers with antiproliferative potential we identified ring

Synthesis of new bile acid-fused tetrazoles using the Schmidt reaction

• Dušan Đ. Škorić,
• Olivera R. Klisurić,
• Dimitar S. Jakimov,
• Marija N. Sakač and
• János J. Csanádi

Beilstein J. Org. Chem. 2021, 17, 2611–2620, doi:10.3762/bjoc.17.174

• observations about the preferred migration of the more substituted carbon atom during the Schmidt reaction [49]. Also, a retention of configuration at the C-13 position was confirmed by NOE NMR experiments. The chemical shift of some protons in compounds 13 and 14 exhibited effects of magnetic anisotropy from

α-Ketol and α-iminol rearrangements in synthetic organic and biosynthetic reactions

• Scott Benz and
• Andrew S. Murkin

Beilstein J. Org. Chem. 2021, 17, 2570–2584, doi:10.3762/bjoc.17.172

• transferred between the oxygen atoms after the alkyl migration, making it especially useful in synthetic strategies using these protected intermediates. Additionally, the reaction was found to be useful in the kinetic resolution of a racemic mixture of chiral substrates possessing both alkyl and aryl α

• example of the use of conjugation to drive an α-ketol rearrangement. This study elegantly illustrates the synthetic power of α-ketol rearrangements, whose suprafacial migration ensured that the α-ketol moiety present in the target product 31 was installed with correct stereochemistry. Taking inspiration

Cryogels: recent applications in 3D-bioprinting, injectable cryogels, drug delivery, and wound healing

• Luke O. Jones,
• Leah Williams,
• Tasmin Boam,
• Martin Kalmet,
• Chidubem Oguike and
• Fiona L. Hatton

Beilstein J. Org. Chem. 2021, 17, 2553–2569, doi:10.3762/bjoc.17.171

• The skin acts as a protective barrier against the environment with immunologic and sensorial functions [7]. As of now, the way of dealing with extensive skin loss would be wound dressing, autografts, and allographs but there is a lot of room for improvement. Cryogels can cause cell migration which

• shows promise to solving these problems and enhancing skin substitutes [7]. An optimal bio-scaffold would have to be biocompatible, biodegradable, have a high pore connectivity and swelling ratio as its function is to promote cell growth and act as a nucleus for cell migration. Moreover, ideally it

Strategies for the synthesis of brevipolides

• Yudhi D. Kurniawan and
• A'liyatur Rosyidah

Beilstein J. Org. Chem. 2021, 17, 2399–2416, doi:10.3762/bjoc.17.157

• followed by esterification with 3-butenoic acid (37) under Steglich conditions (Scheme 3). The resulting product 38 was isolated in 86% yield. A subsequent ring-closing metathesis reaction and DBU-assisted double bond migration then furnished the anticipated structure 39. The PMB functionality was removed

• -promoted double bond migration. The cyclopropyl functionality in 46 can be assembled from the reaction of sulfur ylide and the α,β-unsaturated ketone 47, which in turn can be realized from the cross metathesis between commercially available ethyl vinyl ketone (48) and the C2-symmetrical diene-diol 49. The

• all the centers of the stereochemical brevipolides but in the mirror image of the natural configuration. After sequential ring-closing metathesis, base-promoted olefin migration, and MEM removal, the ent-brevipolide H (ent-8) was obtained. This compound showed inhibition activity in the preliminary

Chemical syntheses and salient features of azulene-containing homo- and copolymers

• Vijayendra S. Shetti

Beilstein J. Org. Chem. 2021, 17, 2164–2185, doi:10.3762/bjoc.17.139

• , whereas the polymers 157 and 158 were containing 25–75 mol % azulene. The photophysical studies carried out on the neutral/protonated polymer series 155 and 158 were supportive of the fact that the optoelectronic property, electronic interactions, and exciton migration can be tuned by varying the density

Progress and challenges in the synthesis of sequence controlled polysaccharides

• Giulio Fittolani,
• Theodore Tyrikos-Ergas,
• Denisa Vargová,
• Manishkumar A. Chaube and
• Martina Delbianco

Beilstein J. Org. Chem. 2021, 17, 1981–2025, doi:10.3762/bjoc.17.129

On the application of 3d metals for C–H activation toward bioactive compounds: The key step for the synthesis of silver bullets

• Renato L. Carvalho,
• Amanda S. de Miranda,
• Mateus P. Nunes,
• Roberto S. Gomes,
• Guilherme A. M. Jardim and
• Eufrânio N. da Silva Júnior

Beilstein J. Org. Chem. 2021, 17, 1849–1938, doi:10.3762/bjoc.17.126

• -component reaction in which a cobalt-Cp*-catalyzed C–H bond addition afforded complex scaffolds in good yields (Scheme 37B and C) [193]. The authors explained the stereoselectivity by means of a mechanism involving a hydride migration suffering influence of steric effects related not only to the catalyst

Methodologies for the synthesis of quaternary carbon centers via hydroalkylation of unactivated olefins: twenty years of advances

• Thiago S. Silva and
• Fernando Coelho

Beilstein J. Org. Chem. 2021, 17, 1565–1590, doi:10.3762/bjoc.17.112

• the Pd(II) intermediate, with retention of the configuration. When 1d-3,3-d2 was used in the presence of the Pd(II) catalyst, only the isotopomer 2d-6-d1 was obtained, indicating the migration of the Pd(II) alkyl complex from the site of the cyclization C(4) to the α-carbonyl position and pointing to

Free-radical cyclization approach to polyheterocycles containing pyrrole and pyridine rings

• Ivan P. Mosiagin,
• Olesya A. Tomashenko,
• Dar’ya V. Spiridonova,
• Mikhail S. Novikov,
• Sergey P. Tunik and
• Alexander F. Khlebnikov

Beilstein J. Org. Chem. 2021, 17, 1490–1498, doi:10.3762/bjoc.17.105

• XRD-analysis (Figure 3). It was found that both salt 17a and base 18a can be isomerized into isomer 19 under heating in the presence of AlCl3 via migration of the 3-Ph-group into the position 2 (Scheme 6). Compounds 18a, 19 can be quantitatively N-alkylated by MeI at room temperature and by BnBr at 40