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Search for "cis" in Full Text gives 701 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Tri(n-butyl)phosphine-promoted domino reaction for the efficient construction of spiro[cyclohexane-1,3'-indolines] and spiro[indoline-3,2'-furan-3',3''-indolines]

  • Hui Zheng,
  • Ying Han,
  • Jing Sun and
  • Chao-Guo Yan

Beilstein J. Org. Chem. 2022, 18, 669–679, doi:10.3762/bjoc.18.68

Graphical Abstract
  • aryl group exist on the cis-position of the carbonyl group on the exocyclic C=C bond (Z-configuration). Thus, it can be concluded that the major isomers 3a–z have this kind of the relative configuration. In Figure 3, the aryl group and the carbonyl group of the oxindole scaffold also exist on trans
  • -position in the newly formed cyclohexyl ring, while an E-configuration was observed for the exocyclic C=C double bond. Therefore, the major and minor isomers were actually attributable to the Z/E-configuration of the C=C bond, not to the cis/trans-positions in the newly formed cyclohexyl ring. In order to
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Published 14 Jun 2022

New synthesis of a late-stage tetracyclic key intermediate of lumateperone

  • Mátyás Milen,
  • Bálint Nyulasi,
  • Tamás Nagy,
  • Gyula Simig and
  • Balázs Volk

Beilstein J. Org. Chem. 2022, 18, 653–659, doi:10.3762/bjoc.18.66

Graphical Abstract
  • to the hydrazine derivative 4, followed by a Fischer indole synthesis with ethyl 4-oxopiperidine-1-carboxylate (5) provided tetracyclic compound 6. Its reduction with sodium cyanoborohydride in trifluoroacetic acid (TFA) to cis-indoline derivative (±)-7, followed by N-methylation [(±)-8] and
  • with triethylsilane in TFA to cis-racemate 15. The key step of the syntheses is the resolution of this intermediate with (R)-mandelic acid. The enantiomerically pure (R)-mandelate salt 16 thus obtained was reacted with ethyl chloroformate to give 17. It was then transformed to tetracyclic derivative 8
  • reduced with sodium cyanoborohydride in acetic acid to cis-indoline derivative (±)-35. Removal of the trifluoroacetyl group to (±)-36 followed by N-methylation with formaldehyde and sodium cyanoborohydride gave target compound (±)-9a. It has to be mentioned that the preparation of compound 31 has been
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Published 10 Jun 2022

Heteroleptic metallosupramolecular aggregates/complexation for supramolecular catalysis

  • Prodip Howlader and
  • Michael Schmittel

Beilstein J. Org. Chem. 2022, 18, 597–630, doi:10.3762/bjoc.18.62

Graphical Abstract
  • . For this purpose, they have chosen the ditopic bisurea “strut” 12 (Figure 3), which generated a 2D discrete molecular triangle 14 in the presence of an equimolar amount of the cis-(tmen)Pd(NO3)2 acceptor 5 [59]. In order to prevent the urea moieties on the triangle to get engaged in intermolecular H
  • -bonding, which would lead to catalytic quenching, a unique design strategy was applied. Instead of using a cis-blocked palladium(II) unit for self-assembly, Pd(NO3)2 was employed along with the triazole-based 0° clip 13. In a one-pot reaction, 12 and 13 in DMSO were treated with Pd(NO3)2 in a 1:1:1 ratio
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Published 27 May 2022

Tosylhydrazine-promoted self-conjugate reduction–Michael/aldol reaction of 3-phenacylideneoxindoles towards dispirocyclopentanebisoxindole derivatives

  • Sayan Pramanik and
  • Chhanda Mukhopadhyay

Beilstein J. Org. Chem. 2022, 18, 469–478, doi:10.3762/bjoc.18.49

Graphical Abstract
  • diffraction analysis also revealed the presence of four chiral stereocenters with two oxindole moieties at 1,3-possition that are in trans orientation to the 2-benzoyl group and the 5-aryl group is in cis orientation (Figure 2). This observation proved that the most thermodynamically stable diastereomer was
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Published 27 Apr 2022

Site-selective reactions mediated by molecular containers

  • Rui Wang and
  • Yang Yu

Beilstein J. Org. Chem. 2022, 18, 309–324, doi:10.3762/bjoc.18.35

Graphical Abstract
  • alkenyl site, producing the final 1,2-reduction product cis-O-hydroxycinnamyl alcohol 19. As a comparison, in the absence of the β-cyclodextrin host, both the 1,2- and 1,4-reduction products were observed. X-ray crystallography determined the host–guest complex of the coumarin and β-cyclodextrin, which
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Published 14 Mar 2022

Regioselectivity of the SEAr-based cyclizations and SEAr-terminated annulations of 3,5-unsubstituted, 4-substituted indoles

  • Jonali Das and
  • Sajal Kumar Das

Beilstein J. Org. Chem. 2022, 18, 293–302, doi:10.3762/bjoc.18.33

Graphical Abstract
  • electronic nature. Environment-friendly reaction conditions, easily accessible substrates, and broad substrate scope highlight the practicality of this methodology. Results of the acid-catalyzed intramolecular hydroindolation of cis-β-(α′,α′-dimethyl)-4′-methindolylstyrenes 17 were reported by Stokes and co
  • [4,3,2-cd]indoles via indole C3 regioselective aza-Michael addition/cyclization/dehydration sequence. Indole C3 regioselective Pictet−Spengler reaction of 2-(1H-indol-4-yl)ethanamines. Indole C3 regioselective hydroindolation of cis-β-(α′,α′-dimethyl)-4′-methindolylstyrenes. Indole C3 regioselective
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Published 08 Mar 2022

Tenacibactins K–M, cytotoxic siderophores from a coral-associated gliding bacterium of the genus Tenacibaculum

  • Yasuhiro Igarashi,
  • Yiwei Ge,
  • Tao Zhou,
  • Amit Raj Sharma,
  • Enjuro Harunari,
  • Naoya Oku and
  • Agus Trianto

Beilstein J. Org. Chem. 2022, 18, 110–119, doi:10.3762/bjoc.18.12

Graphical Abstract
  • uniquely, both of the olefinic proton resonances (H12 and H13) were broadened at 25 °C (Figure 3a). However, upon heating to 50 °C, H12 split into doublet-triplet, which allowed the extraction of 3JH12,H13 = 11.4 Hz to deduce a cis configuration. H13, in contrast, broadened more severely at the raised
  • carbons (C10: δC 130.2; C11: δC 128.9), revealing the site of unsaturation at a γ,δ-position (Figure 2 and Table 2). The double bond geometry was determined to be cis on the basis of the chemical shifts of the allylic carbons (C12: δC 22.3, C9: δC 26.6) [25], which are closer to those of a (Z)-isomer (δC
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Published 13 Jan 2022

Efficient and regioselective synthesis of dihydroxy-substituted 2-aminocyclooctane-1-carboxylic acid and its bicyclic derivatives

  • İlknur Polat,
  • Selçuk Eşsiz,
  • Uğur Bozkaya and
  • Emine Salamci

Beilstein J. Org. Chem. 2022, 18, 77–85, doi:10.3762/bjoc.18.7

Graphical Abstract
  • , Hacettepe University, 06800 Ankara, Turkey 10.3762/bjoc.18.7 Abstract The first synthesis of 2-amino-3,4-dihydroxycyclooctane-1-carboxylic acid, methyl 6-hydroxy-9-oxo-8-oxabicyclo[5.2.1]decan-10-yl)carbamate, and 10-amino-6-hydroxy-8-oxabicyclo[5.2.1]decan-9-one starting from cis-9-azabicyclo[6.2.0]dec-6
  • -en-10-one is described. cis-9-Azabicyclo[6.2.0]dec-6-en-10-one was transformed into the corresponding amino ester and its protected amine. Oxidation of the double bond in the N-Boc-protected methyl 2-aminocyclooct-3-ene-1-carboxylate then delivered the targeted amino acid and its derivatives. Density
  • . We have recently reported the synthesis of various eight-membered aminocyclitols and their derivatives [19][20][21][22][23][24][25]. In the present paper, we describe the synthesis of some hydroxylated β-amino acid derivatives containing eight-membered rings starting from cis,cis-1,3-cyclooctadiene
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Published 06 Jan 2022

Peptide stapling by late-stage Suzuki–Miyaura cross-coupling

  • Hendrik Gruß,
  • Rebecca C. Feiner,
  • Ridhiwan Mseya,
  • David C. Schröder,
  • Michał Jewgiński,
  • Kristian M. Müller,
  • Rafał Latajka,
  • Antoine Marion and
  • Norbert Sewald

Beilstein J. Org. Chem. 2022, 18, 1–12, doi:10.3762/bjoc.18.1

Graphical Abstract
  • diastereomers, i.e. cis/trans isomers or conformers with a high interconversion barrier. For complestatin-based macrocyclic peptides, the existence of biaryl atropisomers caused by the indole of tryptophan has been reported [82]. Recently, the occurrence of isomers was also observed in our group for SMC
  • macrocycle. The amide bond in the staple of P5 is connected to two flexible aliphatic chains and may exist in cis and trans configuration. The energy difference in the analogue N-methylacetamide (NMA) favours the trans isomer by about 2.3 kcal mol−1, which corresponds to an expected cis/trans ratio of about
  • cis and trans isomers compared to isolated NMA. The presence of diastereomers in the peptide bonds is less likely since the cis/trans ratio in polypeptides is lower than 1:820 (i.e., an energy difference greater than 4.0 kcal mol−1 in favour of the trans isomer) [84]. It is, however, currently
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Published 03 Jan 2022

Iron-catalyzed domino coupling reactions of π-systems

  • Austin Pounder and
  • William Tam

Beilstein J. Org. Chem. 2021, 17, 2848–2893, doi:10.3762/bjoc.17.196

Graphical Abstract
  • co-workers established a Heck/Kumada cross-coupling cascade to construct nitrogen and oxygen-containing cis-heterospirocycles 40 in high yield and diastereoselectivity with inexpensive Fe(acac)3 as the precatalyst (Scheme 8) [73]. Interestingly, this protocol was applicable to substrates bearing
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Published 07 Dec 2021

Biological properties and conformational studies of amphiphilic Pd(II) and Ni(II) complexes bearing functionalized aroylaminocarbo-N-thioylpyrrolinate units

  • Samet Poyraz,
  • Samet Belveren,
  • Sabriye Aydınoğlu,
  • Mahmut Ulger,
  • Abel de Cózar,
  • Maria de Gracia Retamosa,
  • Jose M. Sansano and
  • H. Ali Döndaş

Beilstein J. Org. Chem. 2021, 17, 2812–2821, doi:10.3762/bjoc.17.192

Graphical Abstract
  • successfully performed using the corresponding acetate salt in methanol at rt for 48 h, affording cis-L1-M, L2-M, and L3-M in yields depicted in Scheme 1. The relative configuration was unambiguously determined by comparison of their corresponding 1H NMR with the reported similar 1H NMR with other metals, and
  • the cis-configuration determined according to X-ray diffraction patterns observed in precedent works [15][16]. Although a structural motif of the metallosurfactants is having a long alkyl chain (hydrophobic part), in these cases, L1–L3 possessed four hydrophobic domains, which are responsible of the
  • conformations analyzed by the 1H NMR spectra of nickel and palladium complexes, presumably correlated with their activity. According to the previous activities of derivatives of this nature [15][16] the cis-complex was identified as the therapeutic arrow. We initially tried to determine the driving force
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Published 02 Dec 2021

Highly stereocontrolled total synthesis of racemic codonopsinol B through isoxazolidine-4,5-diol vinylation

  • Lukáš Ďurina,
  • Anna Ďurinová,
  • František Trejtnar,
  • Ľuboš Janotka,
  • Lucia Messingerová,
  • Jana Doháňošová,
  • Ján Moncol and
  • Róbert Fischer

Beilstein J. Org. Chem. 2021, 17, 2781–2786, doi:10.3762/bjoc.17.188

Graphical Abstract
  • -catalyzed hydrolysis of 10 with concentrated hydrochloric acid in acetone/water afforded diol 3 in excellent 93% yield. The crystallization of the crude product from a hexanes/CH2Cl2 mixture led to the preferential formation of the thermodynamically more stable 4,5-cis isomer (determined on the basis of a
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Published 24 Nov 2021

Synthetic strategies toward 1,3-oxathiolane nucleoside analogues

  • Umesh P. Aher,
  • Dhananjai Srivastava,
  • Girij P. Singh and
  • Jayashree B. S

Beilstein J. Org. Chem. 2021, 17, 2680–2715, doi:10.3762/bjoc.17.182

Graphical Abstract
  • derivative 11 was obtained by cyclization with 3 equivalents of potassium O-ethyl xanthate. It was then treated with a methanolic ammonia solution to give triol compound 12. The protection of the cis-2,3-vicinal hydroxy groups of 12 with an isopropylidene, followed by benzoylation, gave compound 13. Using 2
  • ). Sodium periodate was used for oxidative cleavage of cis-diol 3d. The subsequent aldehyde was then converted to a vicinal diol by reduction with sodium borohydride. Further, it was protected by 2,2-dimethoxypropane to give the 1,3-oxathiolane derivative 21. The benzoylated compound 22 was obtained by
  • hydroxyoxathiolane 32. Further, acetylation of the hydroxyoxathiolane in the presence of methanesulfonic acid gave a 1:2 mixture of the trans-diastereomer 33 and the cis-diastereomer 34. The esterification using ʟ-menthol as a chiral auxiliary resulted in a diastereomeric mixture, which was successfully
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Published 04 Nov 2021

Efficient synthesis of polyfunctionalized carbazoles and pyrrolo[3,4-c]carbazoles via domino Diels–Alder reaction

  • Ren-Jie Fang,
  • Chen Yan,
  • Jing Sun,
  • Ying Han and
  • Chao-Guo Yan

Beilstein J. Org. Chem. 2021, 17, 2425–2432, doi:10.3762/bjoc.17.159

Graphical Abstract
  • trans-oriented. Additionally, the phenyl group is cis-oriented to the 1-benzylpyrrolidine-2,5-dione ring in compound 3a. On the other hand, for compound 3b (Figure 3), it can be seen that the phenyl group is trans-oriented to both, the p-chlorobenzoyl group and the 1-benzylpyrrolidine-2,5-dione ring in
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Published 16 Sep 2021

Advances in mercury(II)-salt-mediated cyclization reactions of unsaturated bonds

  • Sumana Mandal,
  • Raju D. Chaudhari and
  • Goutam Biswas

Beilstein J. Org. Chem. 2021, 17, 2348–2376, doi:10.3762/bjoc.17.153

Graphical Abstract
  • two separate publications [36][37]. The cyclized product thus formed was further treated with iodine to get trans-2,5-bis(iodomethyl)-p-dioxane (4a). The formation of trans-isomer 4a as the major product and cis-isomer 4b as a minor product was later confirmed by Summerbell et al. by repeating the
  • ratio of diastereomeric products [39]. Later, Summerbell and co-workers modified the reaction conditions to synthesize 2,6-disubstituted dioxane derivatives 6 (cis/trans 16:1). Unlike 2,5-disubstituted dioxane derivatives, here the cis-isomer was the major product. A higher ratio of the cis-dioxane 6
  • the selective formation of diastereomeric products. They also observed that changes in Hg(II) salts result in different ratios of the cis- and trans-isomer in the cyclized products [47]. The differences in cis and trans ratios were primarily due to the basicity of anions associated with Hg(II) salts
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Published 09 Sep 2021

Phenolic constituents from twigs of Aleurites fordii and their biological activities

  • Kyoung Jin Park,
  • Won Se Suh,
  • Da Hye Yoon,
  • Chung Sub Kim,
  • Sun Yeou Kim and
  • Kang Ro Lee

Beilstein J. Org. Chem. 2021, 17, 2329–2339, doi:10.3762/bjoc.17.151

Graphical Abstract
  • relatively large coupling constant (8.8 Hz) between H-7 and H-8 in 2, as opposed to the relatively small coupling constant (6.1 Hz) between H-7 and H-8 in 1, verified that H-7 and H-8 are cis-oriented [10][16], which was supported by the NOESY correlations of H-7/H-8, H-2/H-9, and H-6/H-9 (Figure 2). The ECD
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Published 07 Sep 2021

Nomimicins B–D, new tetronate-class polyketides from a marine-derived actinomycete of the genus Actinomadura

  • Zhiwei Zhang,
  • Tao Zhou,
  • Taehui Yang,
  • Keisuke Fukaya,
  • Enjuro Harunari,
  • Shun Saito,
  • Katsuhisa Yamada,
  • Chiaki Imada,
  • Daisuke Urabe and
  • Yasuhiro Igarashi

Beilstein J. Org. Chem. 2021, 17, 2194–2202, doi:10.3762/bjoc.17.141

Graphical Abstract
  • groups (Table 1). COSY analysis clarified two carbon chains (Figure 2). The first one, spanning from H7 to H17, contained an oxymethine (H9) branching at C10, a cis-configured double bond between C11 and C12 (3JH11,H12 = 10.0 Hz), and a trans-double bond between C15 and C16 (3JH15,H16 = 14.8 Hz
  • -cis configuration of the diene moiety was indicated by a NOESY correlation between H21 and H27. The absolute configuration of the dehydrodecalin moiety of 3 was tentatively assigned to be identical with 4 because 3 was considered as a biosynthetic precursor of 4 [20]. Compounds 1‒3 showed
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Published 27 Aug 2021

Progress and challenges in the synthesis of sequence controlled polysaccharides

  • Giulio Fittolani,
  • Theodore Tyrikos-Ergas,
  • Denisa Vargová,
  • Manishkumar A. Chaube and
  • Martina Delbianco

Beilstein J. Org. Chem. 2021, 17, 1981–2025, doi:10.3762/bjoc.17.129

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  • recognition by plant cell-wall antibodies. To avoid performing the challenging 1,2-cis glycosylation that would generate a mixture of anomers in AGA, the α(1–6) linkage between glucose and xylose was pre-installed in the disaccharide BB 16 (Scheme 3, highlighted in red) [104]. The orthogonal levulinoyl (Lev
  • solution phase using block coupling [165]. α-Glucans In contrast to the relatively simple formation of a 1,2-trans glycosidic bond using participating group at C-2, the construction of 1,2-cis glycosidic bonds is a long-standing challenge in the field of glycochemistry [167]. The formation of 1,2-cis Glc
  • linkages is particularly relevant, as α(1–4)-glucans form the backbone of starch, with the linear amylose and the branched amylopectin, and α(1–3)-glucans are related to fungal pathogenicity in plants [168]. Only few options can aid the stereoselective construction of 1,2-cis glycosidic bonds. In general
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Published 05 Aug 2021

Methodologies for the synthesis of quaternary carbon centers via hydroalkylation of unactivated olefins: twenty years of advances

  • Thiago S. Silva and
  • Fernando Coelho

Beilstein J. Org. Chem. 2021, 17, 1565–1590, doi:10.3762/bjoc.17.112

Graphical Abstract
  • helped to elucidate the operative mechanism of the hydroalkylation (Scheme 3) [29]. The outer-sphere attack of the enolic carbon on the complexed metal–olefin double bond was evidenced by the cyclization of (E)-1d-7,8-d2, which furnished exclusively the compound cis-2d-3,4-d2 after the protonolysis of
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Published 07 Jul 2021

Breaking paracyclophane: the unexpected formation of non-symmetric disubstituted nitro[2.2]metaparacyclophanes

  • Suraj Patel,
  • Tyson N. Dais,
  • Paul G. Plieger and
  • Gareth J. Rowlands

Beilstein J. Org. Chem. 2021, 17, 1518–1526, doi:10.3762/bjoc.17.109

Graphical Abstract
  • observed (Figure 6). As with the oxidation, we assume that the lower deck blocks approach from one face. Protonation of the adduct also occurs anti to the para ring. We suspect that this second addition favors the trans product over the cis rather than the para ring influencing the approach of the proton
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Published 29 Jun 2021

Cascade intramolecular Prins/Friedel–Crafts cyclization for the synthesis of 4-aryltetralin-2-ols and 5-aryltetrahydro-5H-benzo[7]annulen-7-ols

  • Jie Zheng,
  • Shuyu Meng and
  • Quanrui Wang

Beilstein J. Org. Chem. 2021, 17, 1481–1489, doi:10.3762/bjoc.17.104

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  • to the formation of the expected 4-(3,4-dimethoxyphenyl)-1,2,3,4-tetrahydronaphthalen-2-ol (14aa), 51:49 mixture of cis/trans-diastereomers) as a colorless oil in 50% yield (Table 1, entry 1). The use of Et2AlCl as the Lewis acid gave tetralin 14aa in a slightly improved 55% yield (Table 1, entry 2
  • substoichiometric amounts afforded significantly decreased yields of 14aa (Table 1, entries 7 and 8). The relative cis- and trans-configuration of the C-2 hydroxy group and the C-4 aryl substituent (Figure 2) were assigned on the basis of 1H-1H COSY analysis. Firstly, the HSQC analysis was used to determine H3. The
  • 13C NMR chemical shift for C2 is expected to be in the range of 60 to 70 ppm and the assignment of H3 was based on the HSQC correlation between H3 and C2. Then, H1 and H2 could be assigned by COSY and HSQC experiments. Following that, NOE analysis was applied to analyze the relative cis- and trans
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Published 22 Jun 2021

Fritsch–Buttenberg–Wiechell rearrangement of magnesium alkylidene carbenoids leading to the formation of alkynes

  • Tsutomu Kimura,
  • Koto Sekiguchi,
  • Akane Ando and
  • Aki Imafuji

Beilstein J. Org. Chem. 2021, 17, 1352–1359, doi:10.3762/bjoc.17.94

Graphical Abstract
  • smoothly occurs to give alkynes 4 because substituent R1 can readily approach the C–Cl antibonding orbital (Scheme 7a). On the other hand, when substituent R1 is located cis to the chloro group and a nonmigratable alkyl group R2 occupies the trans position, the 1,2-rearrangement does not occur directly
  • alkynes 4. a) 1,2-Rearrangement readily takes place with substrates with trans-oriented Cl-substituent to the migratable group R1. b) Formation of product 4 from geometric cis isomer is possible due to the equilibrium between magnesium alkylidene carbenoids. c) Halogen exchange between a 1-chlorovinyl p
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Published 28 May 2021

Icilio Guareschi and his amazing “1897 reaction”

  • Gian Cesare Tron,
  • Alberto Minassi,
  • Giovanni Sorba,
  • Mara Fausone and
  • Giovanni Appendino

Beilstein J. Org. Chem. 2021, 17, 1335–1351, doi:10.3762/bjoc.17.93

Graphical Abstract
  • and restless leg syndrome [53]. Guareschi imides exist in solution predominantly as dicarbonyl tautomers with a cis arrangement of the cyano groups. Conversely, the corresponding anions exist as a mixture of mono- and dienolized tautomers, with a strong preference (≈9:1) for the monoenolized form [8
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Published 25 May 2021

A comprehensive review of flow chemistry techniques tailored to the flavours and fragrances industries

  • Guido Gambacorta,
  • James S. Sharley and
  • Ian R. Baxendale

Beilstein J. Org. Chem. 2021, 17, 1181–1312, doi:10.3762/bjoc.17.90

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Published 18 May 2021

Heterogeneous photocatalytic cyanomethylarylation of alkenes with acetonitrile: synthesis of diverse nitrogenous heterocyclic compounds

  • Guanglong Pan,
  • Qian Yang,
  • Wentao Wang,
  • Yurong Tang and
  • Yunfei Cai

Beilstein J. Org. Chem. 2021, 17, 1171–1180, doi:10.3762/bjoc.17.89

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  • cyanomethylarylation of N-aryl acrylamides for the synthesis of oxindoles. Reaction conditions: 7 (0.2 mmol, 1 equiv), 2d (0.4 mmol, 2 equiv), CH3CN (8 mL), CN-K (0.5 mg/mL), 2 × 24 W blue LEDs (460 ± 5 nm), 80 °C. aConducted at 100 °C. bPerformed with 1 mg/mL of CN-K. cRatio = trans/cis. CN-K-catalyzed
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Published 17 May 2021
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