Navigating and expanding the roadmap of natural product genome mining tools

• Friederike Biermann,
• Sebastian L. Wenski and
• Eric J. N. Helfrich

Beilstein J. Org. Chem. 2022, 18, 1656–1671, doi:10.3762/bjoc.18.178

• (non-targeted, e.g., modifying culturing conditions) and pathway-specific (e.g., heterologous expression or in situ pathway activation) approaches have been developed to awaken silent biosynthetic pathways [16]. Most importantly, however, genome mining can prevent the time-consuming re-discovery of

A new route for the synthesis of 1-deazaguanine and 1-deazahypoxanthine

• Raphael Bereiter,
• Marco Oberlechner and
• Ronald Micura

Beilstein J. Org. Chem. 2022, 18, 1617–1624, doi:10.3762/bjoc.18.172

• . Subsequent reduction with sodium dithionite then afforded triamine 9. Another way comprised the installation of a nitroso group in compound 6 through reaction with in situ-generated nitrous acid giving nitroso compound 8. The subsequent reduction to the corresponding amine with hydrogen sulfide afforded the

One-pot double annulations to confer diastereoselective spirooxindolepyrrolothiazoles

• Juan Lu,
• Bin Yao,
• Desheng Zhan,
• Zhuo Sun,
• Yun Ji and
• Xiaofeng Zhang

Beilstein J. Org. Chem. 2022, 18, 1607–1616, doi:10.3762/bjoc.18.171

• introduced in this study. Subsequently one equivalent of aldehyde and olefinic oxindole in situ were followed by decarboxylative 1,3-dipolar cycloaddition for diastereoselective synthesis of spirooxindolepyrrolothiazoles with generating 5 new bonds, 5 stereocenters and two heterocycles (Scheme 1C and Scheme

• purification from N,S-acetalation with 1.0:1.15 of 1a/2 at 25 °C for 6 h with EtOH as solvent, in situ followed by addition of 1.1:1.0 of 1a/4a for [3 + 2] cycloaddition at 90 °C for 9 h gave compound 5a with the 81% of LC yield. Next, the stepwise process was also carried out by using the thioproline 3a (1

Preparation of β-cyclodextrin-based dimers with selectively methylated rims and their use for solubilization of tetracene

• Konstantin Lebedinskiy,
• Volodymyr Lobaz and
• Jindřich Jindřich

Beilstein J. Org. Chem. 2022, 18, 1596–1606, doi:10.3762/bjoc.18.170

• propargyl-containing compounds, including other CDs, to form a dimer [12]. Usually, such reactions proceed with a Cu(I) catalyst [27]; however, Cu(I) can be generated in situ by the reduction of Cu(II) [12][28] or by the dissolution of metal copper [29]. Moreover, the load of the catalyst varies from

Functionalization of imidazole N-oxide: a recent discovery in organic transformations

• Koustav Singha,
• Imran Habib and
• Mossaraf Hossain

Beilstein J. Org. Chem. 2022, 18, 1575–1588, doi:10.3762/bjoc.18.168

• . The study of the optimization conditions showed that the highest yields of products were obtained when: (I) in case of path A, 1.0 mmol of the 2,2-dimethyl-4-phenyl-2H-imidazole 1-oxide (9a) was reacted with pentafluorophenyllithium (13) (which was formed in situ from pentafluorobenzene (12)] in the

Dissecting Mechanochemistry III

• Lars Borchardt and
• José G. Hernández

Beilstein J. Org. Chem. 2022, 18, 1454–1456, doi:10.3762/bjoc.18.150

• Margetić used dibrominated polycyclic imides as substrates to generate reactive alkenes, which could be trapped in situ by several dienes through Diels−Alder cycloadditions by ball milling (Scheme 3) [7]. Further, Moores and co-workers synthesized phosphorus-bridged heptazine-based carbon nitrides (g-h-PCN

• . Mechanochemical palladium-catalyzed borylation protocol of aryl halides. 1,2-Debromination of polycyclic imides, followed by in situ trapping of the dienophile by several dienes. Synthesis of g-h-PCN from sodium phosphide and trichloroheptazine mediated by mechanochemistry. Mechanochemical intra- and

Synthesis and electrochemical properties of 3,4,5-tris(chlorophenyl)-1,2-diphosphaferrocenes

• Almaz A. Zagidullin,
• Farida F. Akhmatkhanova,
• Mikhail N. Khrizanforov,
• Robert R. Fayzullin,
• Tatiana P. Gerasimova,
• Ilya A. Bezkishko and
• Vasili A. Miluykov

Beilstein J. Org. Chem. 2022, 18, 1338–1345, doi:10.3762/bjoc.18.139

• treated with a mixture of sodium polyphosphides of the type NaxPy (obtained in situ from sodium metal and white phosphorus P4), containing mainly NaP5 and Na3P7 [42]), resulting in sodium 3,4,5-tris(chlorophenyl)-1,2-diphosphacyclopentadienides 7 in good yields (60 and 63%, Scheme 3). This reaction

B–N/B–H Transborylation: borane-catalysed nitrile hydroboration

• Filip Meger,
• Alexander C. W. Kwok,
• Franziska Gilch,
• Dominic R. Willcox,
• Alex J. Hendy,
• Kieran Nicholson,
• Andrew D. Bage,
• Thomas Langer,
• Thomas A. Hunt and
• Stephen P. Thomas

Beilstein J. Org. Chem. 2022, 18, 1332–1337, doi:10.3762/bjoc.18.138

• adjusted to maximise efficiency for yield or chemoselectivity. Reaction of the turnover reagent, HBpin, in the absence of catalyst gave no observable reduction (see Supporting Information File 1). The optimised conditions were applied to a substrate scope, where the hydroboration products were converted in

• situ to the corresponding amine hydrochloride salt which can be isolated without the use of column chromatography (Scheme 2). The N,N-diborylamines have also been used directly in subsequent transformations [34][35][36][37]. Heptanenitrile was reduced to 1-heptylamine hydrochloride (1a) in good yield

Ionic multiresonant thermally activated delayed fluorescence emitters for light emitting electrochemical cells

• Merve Karaman,
• Abhishek Kumar Gupta,
• Subeesh Madayanad Suresh,
• Tomas Matulaitis,
• Lorenzo Mardegan,
• Daniel Tordera,
• Henk J. Bolink,
• Sen Wu,
• Stuart Warriner,
• Ifor D. Samuel and
• Eli Zysman-Colman

Beilstein J. Org. Chem. 2022, 18, 1311–1321, doi:10.3762/bjoc.18.136

• 23% overall yield. First, hydrolysis of 1, in situ conversion to the acyl chloride and subsequent Lewis acid-promoted Friedel–Crafts acylation reaction produced compound 2 (Scheme 1), where the AlCl3 was also responsible for the demethylation. Compound 2 was then subjected to monoalkylation with 1,4

Ferrocenoyl-adenines: substituent effects on regioselective acylation

• Mateja Toma,
• Gabrijel Zubčić,
• Jasmina Lapić,
• Senka Djaković,
• Davor Šakić and
• Valerije Vrček

Beilstein J. Org. Chem. 2022, 18, 1270–1277, doi:10.3762/bjoc.18.133

• )B3LYP/6-31+G(d) method.a Supporting Information Supporting Information File 234: Details on experimental procedures, DFT calculated energies and optimized coordinates for transition state structures and reactants, and the results of in situ 1H NMR monitoring. Acknowledgements All calculations were

Enantioselective total synthesis of putative dihydrorosefuran, a monoterpene with an unique 2,5-dihydrofuran structure

• Irene Torres-García,
• Josefa L. López-Martínez,
• Rocío López-Domene,
• Manuel Muñoz-Dorado,
• Ignacio Rodríguez-García and
• Miriam Álvarez-Corral

Beilstein J. Org. Chem. 2022, 18, 1264–1269, doi:10.3762/bjoc.18.132

• -bromobut-2-yne in the presence of CpTiIIICl2 (generated in situ by reduction of CpTiCl3 with Mn) afforded α-hydroxyallene 3. We have recently described that this Barbier-type reaction affords α-hydroxyallenes as major products, mixed with smaller amounts of homopropargylic alcohols, either if the reaction

Modular synthesis of 2-furyl carbinols from 3-benzyldimethylsilylfurfural platforms relying on oxygen-assisted C–Si bond functionalization

• Sebastien Curpanen,
• Per Reichert,
• Gabriele Lupidi,
• Giovanni Poli,
• Julie Oble and
• Alejandro Perez-Luna

Beilstein J. Org. Chem. 2022, 18, 1256–1263, doi:10.3762/bjoc.18.131

• sensitive towards silica gel column chromatography, and all of our attempts to isolate it failed. For this reason, we went on to consider C3–Si functionalization strategies of alcohols 4c–7c relying on the formation of cyclic siloxanes and subsequent in situ cross-coupling. We first briefly investigated Pd

A one-pot electrochemical synthesis of 2-aminothiazoles from active methylene ketones and thioureas mediated by NH₄I

• Shang-Feng Yang,
• Pei Li,
• Zi-Lin Fang,
• Sen Liang,
• Hong-Yu Tian,
• Bao-Guo Sun,
• Kun Xu and
• Cheng-Chu Zeng

Beilstein J. Org. Chem. 2022, 18, 1249–1255, doi:10.3762/bjoc.18.130

• , the in situ generated α-iodoketone was proposed to be the key active species. Keywords: 2-aminothiazoles; electrosynthesis; indirect electrolysis; halide ion; Introduction Thiazoles are prevalent structural motifs in a wide range of natural products [1] and synthetic molecules possessing various

• well-known method (Scheme 1a) [18]. Since active methylene ketones are able to be in situ α-halogenated, the modified Hantzsch condensation of active methylene ketones with thioureas has attracted increasing attention in thiazoles’ synthesis, thereby saving costs and time needed to prepare the required

• α-halogenated dielectrophiles. Along this line, in situ α-halogenation strategies have been developed, using various halogenating reagents including Br2 [19][20], I2 [21][22], NBS [23][24][25], tribromoisocyanuric acid [26], 1,3-dichloro-5,5-dimethylhydantoin [27], HBr or HI, DMSO [28] etc. (Scheme

Dienophilic reactivity of 2-phosphaindolizines: a conceptual DFT investigation

• Nosheen Beig,
• Aarti Peswani and
• Raj Kumar Bansal

Beilstein J. Org. Chem. 2022, 18, 1217–1224, doi:10.3762/bjoc.18.127

• acid catalyst, namely ethylaluminum dichloride [13]. Furthermore, when carrying out the reaction of compounds 1 (R1 = Me, R2 = COOMe, COOEt, COOCMe3) with DMB in the presence of the catalyst O-menthoxyaluminium dichloride, generated in situ, complete diastereoselectivity was observed. The DA reactions

Derivatives of benzo-1,4-thiazine-3-carboxylic acid and the corresponding amino acid conjugates

• Péter Kisszékelyi,
• Tibor Peňaška,
• Klára Stankovianska,
• Mária Mečiarová and
• Radovan Šebesta

Beilstein J. Org. Chem. 2022, 18, 1195–1202, doi:10.3762/bjoc.18.124

• formed in situ from the corresponding aminothiols [9][10][11][12][13]. Green chemistry methods for benzo-1,4-thiazine synthesis have also been described in the literature. 2,3-Disubstituted-1,4-benzothiazines were prepared in high yield (83–96%) by oxidative cyclocondensation of 2-aminobenzenethiols and

• isocyanoacetate (13). The palladium-catalyzed hydrogenation of intermediate 14 gave the racemic N-formyl-protected amino acid methyl ester 15 in good yield. Using either concentrated HCl (aq) or in situ-formed HCl from the reaction of MeOH and acetyl chloride, compound 15 could easily be deprotected to gain

Reductive opening of a cyclopropane ring in the Ni(II) coordination environment: a route to functionalized dehydroalanine and cysteine derivatives

• Oleg A. Levitskiy,
• Olga I. Aglamazova,
• Yuri K. Grishin and
• Tatiana V. Magdesieva

Beilstein J. Org. Chem. 2022, 18, 1166–1176, doi:10.3762/bjoc.18.121

• in the side chain; the regioselectivity can be tuned by the addition of Lewis acids. This type of non-proteinogenic amino acid derivatives is not easily available but strongly required due to their bioactivity. One-pot nucleophilic in situ functionalization of the double bond of dehydroalanine

Synthesis of N-phenyl- and N-thiazolyl-1H-indazoles by copper-catalyzed intramolecular N-arylation of ortho-chlorinated arylhydrazones

• Yara Cristina Marchioro Barbosa,
• Guilherme Caneppele Paveglio,
• Claudio Martin Pereira de Pereira,
• Sidnei Moura,
• Cristiane Storck Schwalm,
• Gleison Antonio Casagrande and
• Lucas Pizzuti

Beilstein J. Org. Chem. 2022, 18, 1079–1087, doi:10.3762/bjoc.18.110

• de Caxias do Sul, 95070-560, Caxias do Sul-RS, Brazil 10.3762/bjoc.18.110 Abstract The broad application of 1H-indazoles has prompted the development of several approaches for the synthesis of such compounds, including metal-free, palladium-, or copper-promoted intramolecular N-arylation of in situ

• ‐substituents, and others suffer from poor regioselectivity for substrates without a directing group [18][19][21][22]. On the other hand, methods based on metal-free [23], palladium- [24][25], and copper-promoted [26][27][28][29][30][31] intramolecular N-arylation of in situ-generated or isolated o

Electrochemical formal homocoupling of sec-alcohols

• Kosuke Yamamoto,
• Kazuhisa Arita,
• Masashi Shiota,
• Masami Kuriyama and
• Osamu Onomura

Beilstein J. Org. Chem. 2022, 18, 1062–1069, doi:10.3762/bjoc.18.108

• ][41][42][43][44]. The group of Wang recently reported the sacrificial anode-free electroreduction of benzophenone derivatives to afford vic-1,2-diols using over-stoichiometric NaN3 under acidic conditions, but appropriate precautions should be taken for in situ-generated explosive and toxic HN3 [45

• -2a was subjected to the present reaction conditions, oxidative C–C bond cleavage of dl-2a proceeded to give the corresponding ketone 3a (Scheme 5b) [48]. Recovered 2a was found to be a mixture of dl and meso isomers, indicating that homocoupling of in situ-generated ketone 3a occurred under the

Molecular diversity of the base-promoted reaction of phenacylmalononitriles with dialkyl but-2-ynedioates

• Hui Zheng,
• Ying Han,
• Jing Sun and
• Chao-Guo Yan

Beilstein J. Org. Chem. 2022, 18, 991–998, doi:10.3762/bjoc.18.99

• , phenacylmalononitrile is also a readily available substrate, which can be easily prepared through a base-promoted substitution reaction of phenacyl bromide with malononitrile under mild conditions [11][12][13][14][15][16]. In many practical cases, phenacylmalononitriles could be conveniently generated in situ by

• final product 4. It is due to the in situ formation and ring-opening of 2-oxabicyclo[2.2.1]hept-5-ene, that only one diastereoisomer 4 with the aryl group and the remaining cyano group in cis-position was selectively formed in the domino reaction process. In order to shed light on the proposed reaction

First example of organocatalysis by cathodic N-heterocyclic carbene generation and accumulation using a divided electrochemical flow cell

• Daniele Rocco,
• Ana A. Folgueiras-Amador,
• Richard C. D. Brown and
• Marta Feroci

Beilstein J. Org. Chem. 2022, 18, 979–990, doi:10.3762/bjoc.18.98

• NHCs are generated in situ, where they may be used as basic or nucleophilic species. Due to the difficulty isolating highly reactive NHCs, the concentration of the obtained NHC solution can be determined indirectly by addition of elemental sulfur after the electrolysis, which realizes quantitative

Introducing a new 7-ring fused diindenone-dithieno[3,2-b:2',3'-d]thiophene unit as a promising component for organic semiconductor materials

• Valentin H. K. Fell,
• Joseph Cameron,
• Alexander L. Kanibolotsky,
• Eman J. Hussien and
• Peter J. Skabara

Beilstein J. Org. Chem. 2022, 18, 944–955, doi:10.3762/bjoc.18.94

• [34], dibromodithienothiophene 24 is lithiated with n-butyllithium at −90 °C, and the resulting species is reacted in situ with triisopropyl borate. After aqueous workup, dithieno[3,2-b:2’,3’-d]thiophene-2,6-diylboronic acid (25) is obtained, enabling subsequent Suzuki–Miyaura cross-coupling [36

• derivative of 31 could be isolated; it hydrolysed on the column back to the starting material. Thus, after reacting 31 with n-butyllithium and trimethyl borate, the obtained species was reacted in situ with pinacol to generate the corresponding boronic ester 32, which could be isolated by column

Synthesis of novel alkynyl imidazopyridinyl selenides: copper-catalyzed tandem selenation of selenium with 2-arylimidazo[1,2-a]pyridines and terminal alkynes

• Mio Matsumura,
• Kaho Tsukada,
• Kiwa Sugimoto,
• Yuki Murata and
• Shuji Yasuike

Beilstein J. Org. Chem. 2022, 18, 863–871, doi:10.3762/bjoc.18.87

• phenylacetylene (3a) was used as a model reaction to determine a suitable base and an equivalent number of reagents (Table 1). The key intermediate 2a was prepared in situ from 1a (0.5 mmol) and Se powder (0.5 mmol) in the presence of 10 mol % of CuI and 1,10-phenanthroline at 130 °C in DMSO under aerobic

• , under an argon atmosphere, the reaction yield decreased by approximately half. This reaction, without Na2CO3 as base, also afforded 4aa in 85% yield (Scheme 1, reaction 1). Although bis(imidazo[1,2-a]pyridin-3-yl)monoselenides 5 could form in situ [32], the reaction of 5 with acetylene 3a under the

First series of N-alkylamino peptoid homooligomers: solution phase synthesis and conformational investigation

• Maxime Pypec,
• Laurent Jouffret,
• Claude Taillefumier and
• Olivier Roy

Beilstein J. Org. Chem. 2022, 18, 845–854, doi:10.3762/bjoc.18.85

• isolated in 78% yield after chromatography. The use of stoichiometric amounts of both partners led to incomplete conversion, with about 1/3 of the starting hydrazine being recovered after two days of reaction. We then tested 2-ethoxy-1-ethoxycarbonyl-1,2-dihydroquinoline (EEDQ), in dioxane, a method for in

• situ generation of a mixed anhydride [45]. This method gave the highest coupling yield to dimer 2d, but again with the condition of using an excess of the acid partner, as some of it was consumed to give the byproduct ethyl ester 1e. Dimer 2d was obtained for example in 95% yield from 1.5 equivalents

Copper-catalyzed multicomponent reactions for the efficient synthesis of diverse spirotetrahydrocarbazoles

• Shao-Cong Zhan,
• Ren-Jie Fang,
• Jing Sun and
• Chao-Guo Yan

Beilstein J. Org. Chem. 2022, 18, 796–808, doi:10.3762/bjoc.18.80

• ][48][49][50]. On the other hand, the Diels–Alder reaction of the in situ generated indole-2,3-quinodimethanes with various dienophiles is also a powerful method for rapid construction of functionalized tetrahydrocarbazoles [51][52][53][54][55][56][57][58][59][60][61][62][63][64][65][66][67][68]. In

• -acetate for the efficient synthesis of diverse spiro tetrahydrocarbazoles. In the presence of CuSO4, the multicomponent reactions of aromatic aldehydes, 2-methylindole and various cyclic dieneophiles such as 3-phenacylideneoxindoles, isatylidene malononitriles and the in situ generated 5-arylidene-1,3

• dienophiles, 5-arylidene-1,3-dimethylbarbituric acids, could be in situ generated by aromatic aldehydes and 1,3-dimethylbarbituric acid under the standard conditions. Therefore, the four-component reaction was carried out by using two molecular aromatic aldehydes, 1,3- dimethylbarbituric acid and 2

Synthesis of α-(perfluoroalkylsulfonyl)propiophenones: a new set of reagents for the light-mediated perfluoroalkylation of aromatics

• Durbis J. Castillo-Pazos,
• Juan D. Lasso and
• Chao-Jun Li

Beilstein J. Org. Chem. 2022, 18, 788–795, doi:10.3762/bjoc.18.79

• generated in situ from propiophenone, and second, the deprotection of propiophenone α-thioesters in the presence of perfluoroalkyliodides and subsequent oxidation of the formed perfluorothioether into the sulfone. However, none of these proposed pathways gave yields high enough for the reaction to be