Synthesis of chiral 3-substituted 3-amino-2-oxindoles through enantioselective catalytic nucleophilic additions to isatin imines

• Hélène Pellissier

Beilstein J. Org. Chem. 2018, 14, 1349–1369, doi:10.3762/bjoc.14.114

• enantioselectivities (90–94% ee), as shown in Scheme 5. The synthetic utility of this novel methodology was demonstrated through the total synthesis of the natural product (−)-psychotriasine (Scheme 5) and the biologically active compound AG-041R (Scheme 1). By using another type of organocatalyst, such as L

Oligonucleotide analogues with cationic backbone linkages

• Melissa Meng and
• Christian Ducho

Beilstein J. Org. Chem. 2018, 14, 1293–1308, doi:10.3762/bjoc.14.111

• type 7 (B1, B2 = nucleobases). Structure of the natural product muraymycin A1 (44) and design concept of nucleosyl amino acid (NAA)-modified (partially) zwitterionic oligonucleotides of type 48 formally derived from structures 45–47 (B1, B2 = nucleobases). Structure of Letsinger's modified

Fluorocyclisation via I(I)/I(III) catalysis: a concise route to fluorinated oxazolines

• Felix Scheidt,
• Christian Thiehoff,
• Gülay Yilmaz,
• Stephanie Meyer,
• Constantin G. Daniliuc,
• Gerald Kehr and
• Ryan Gilmour

Beilstein J. Org. Chem. 2018, 14, 1021–1027, doi:10.3762/bjoc.14.88

• ; cyclisation; fluorination; gauche effect; hypervalent iodine; oxazolines; Introduction Marine and terrestrial natural product bioprospecting has established a broad spectrum of structurally complex, bioactive metabolites containing the venerable 2-oxazoline unit [1][2]. This diversity is exemplified by the

Chlorination of phenylallene derivatives with 1-chloro-1,2-benziodoxol-3-one: synthesis of vicinal-dichlorides and chlorodienes

• Zhensheng Zhao and
• Graham K. Murphy

Beilstein J. Org. Chem. 2018, 14, 796–802, doi:10.3762/bjoc.14.67

• materials [7][8]. And as there is an abundance of chlorine-containing natural products, the synthesis of chlorinated functional groups, such as allyl- and vinyl chlorides, can represent challenging obstacles that practitioners of natural product synthesis must surmount [9][10][11][12]. More commonly, allyl

Volatiles from the xylarialean fungus Hypoxylon invadens

• Jeroen S. Dickschat,
• Tao Wang and
• Marc Stadler

Beilstein J. Org. Chem. 2018, 14, 734–746, doi:10.3762/bjoc.14.62

• (2), another widespread fungal volatile, a plant growth promoting effect and an induction of systemic resistance in plants against fungi was observed [5]. The significant biological effects of these and other fungal volatiles recently resulted in a considerable interest of natural product chemists

• possibilities and retention indices were not available for all cases. All six constitutional isomers were obtained from commercial suppliers and compared to the natural product, establishing the identity of 15 and 3,4-dimethoxytoluene, for which an identical retention index and the best MS match was determined

Recent developments in the asymmetric Reformatsky-type reaction

• Hélène Pellissier

Beilstein J. Org. Chem. 2018, 14, 325–344, doi:10.3762/bjoc.14.21

• . This constituted the key step of the first total synthesis of (30S)-apratoxin E and its (30R)-epimer. Comparing the spectroscopic data of these two diastereomers with those of natural apratoxin E unambiguously confirmed that (30R)-apratoxin E was the natural product and that (30S)-apratoxin E was

• constituted the key step of a nine-step total synthesis of the eastern fragment of jatrophane diterpene Pl-3, which is a complex natural product with high promising biological activities, such as antiproliferative activity and inhibition of the efflux-pump activity of multidrug resistance P-glycoprotein. The

• prepiscibactin through five supplementary steps, including Zn(II)-induced thiazolidine formation followed by lactamization. On the basis of NOE methods, the synthetic prebiscibactin was found spectroscopically indistinguishable from the natural product. More recently, excellent results were also reported by

Volatiles from the tropical ascomycete Daldinia clavata (Hypoxylaceae, Xylariales)

• Tao Wang,
• Kathrin I. Mohr,
• Marc Stadler and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2018, 14, 135–147, doi:10.3762/bjoc.14.9

• natural product is 6-nonyl-2H-pyran-2-one. The antimicrobial and cytotoxic effects of the synthetic volatiles are also reported. Keywords: enantioselective synthesis; gas chromatography; mass spectrometry; natural products; volatiles; Introduction A large variety of volatile organic compounds from

• ethylmagnesium bromide gave 22 that was subsequently oxidised with PCC to the target compound 10. Comparison of the natural product to synthetic 10 established their identity by same retention time and mass spectrum. The mass spectrum of one of the two main compounds (11a) in the headspace extracts (Figure 2B

• 11 were separable by GC on a homochiral stationary phase, one of which matched the natural product in terms of same retention times and mass spectra (Figure 3). To clarify the relative and absolute configuration of the natural stereoisomer of 11 an enantioselective synthesis was performed (Scheme 5

Aminomethylation/hydrogenolysis as an alternative to direct methylation of metalated isoquinolines – a novel total synthesis of the alkaloid 7-hydroxy-6-methoxy-1-methylisoquinoline

• Benedikt C. Melzer,
• Jan G. Felber and
• Franz Bracher

Beilstein J. Org. Chem. 2018, 14, 130–134, doi:10.3762/bjoc.14.8

• as highly attractive building blocks for our project. A literature search revealed that compound 1 is in fact a natural product. It was isolated from the trunk bark of the Taiwanese tree Hernandia nymphaeifolia (Hernandiaceae) in 1996 [10]. No data on the biological activities of this alkaloid have

• been reported so far. Further, this literature search showed that two total syntheses of isoquinoline 1 had been published even before its identification as a natural product (Figure 1). In 1963, Franck and Blaschke [11] obtained 1 by dehydrogenation of its 1,2,3,4-tetrahydro analogue (which itself had

• naphthalene-derived natural product plumbagin. In fact, trapping 1-metalated isoquinoline 3 with Eschenmoser’s salt gave the aminomethyl derivative 5 in 37% yield. Chromatographic separation from starting material 3 (recovered yield: 32%) was unproblematic. Surprising results were obtained in our

From dipivaloylketene to tetraoxaadamantanes

• Gert Kollenz and
• Curt Wentrup

Beilstein J. Org. Chem. 2018, 14, 1–10, doi:10.3762/bjoc.14.1

• been discussed [11], but due to the lack of functional groups, tetraoxaadamantanes have remained largely laboratory curiosities. It is worth noting that the 2,4,10-trioxaadamantanes, which are orthoesters, are well known [12][13], and the natural product muamvatin [14] is a 2,6,9-trioxaadamantane

A Brønsted base-promoted diastereoselective dimerization of azlactones

• Danielle L. J. Pinheiro,
• Gabriel M. F. Batista,
• Pedro P. de Castro,
• Leonã S. Flores,
• Gustavo F. S. Andrade and
• Giovanni W. Amarante

Beilstein J. Org. Chem. 2017, 13, 2663–2670, doi:10.3762/bjoc.13.264

• diastereomer was assigned by X-ray analysis. Finally, one of the products was selectively reduced to provide a functionalized analogue of streptopyrrolidine, a marine natural product isolated from Streptomyces sp. As shown in Table 1, our studies started with the synthesis of dimer 2a using azlactone 1a in the

• significant anti-angiogenesis activity [31]. It is worth mentioning that this product has three consecutive stereocenters and different sites of variation from the original natural product. The hydride comes from the less hindered side of the ketone moiety, leading to the formation of a hydroxy group in cis

Herpetopanone, a diterpene from Herpetosiphon aurantiacus discovered by isotope labeling

• Xinli Pan,
• Nicole Domin,
• Sebastian Schieferdecker,
• Hirokazu Kage,
• Martin Roth and
• Markus Nett

Beilstein J. Org. Chem. 2017, 13, 2458–2465, doi:10.3762/bjoc.13.242

• Xinli Pan Nicole Domin Sebastian Schieferdecker Hirokazu Kage Martin Roth Markus Nett Department of Biochemical and Chemical Engineering, Technical Biology, Technical University Dortmund, Emil-Figge-Strasse 66, 44227 Dortmund, Germany Leibniz Institute for Natural Product Research and Infection

• . aurantiacus 114-95T, we fed the strain with 13C-labeled glucose and, subsequently, searched for characteristic mass shifts in its metabolome. This approach led to the discovery of a new natural product, of which the isotope pattern is indicative for a diterpene originating from the methylerythritol phosphate

• natural product discovery. By comparing the ion chromatograms of cultures that were grown in the presence or absence of singly labeled glucose, it might be possible to identify terpenoid natural products in a complex metabolic background. To validate the feasibility of this approach, we chose the

Sulfation and amidinohydrolysis in the biosynthesis of giant linear polyenes

• Hui Hong,
• Markiyan Samborskyy,
• Katsiaryna Usachova,
• Katharina Schnatz and
• Peter F. Leadlay

Beilstein J. Org. Chem. 2017, 13, 2408–2415, doi:10.3762/bjoc.13.238

• before or after the specific sulfonation step. The sequence of the sulfotransferase is a useful probe to uncover related gene clusters in public sequence databases. Sulfonation remains a rare and relatively poorly understood modification in natural product biosynthesis [27][28][29][30]. As our

• understanding of their specificity improves, sulfotransferases have been deployed to increase the structural diversity of several classes of natural products [31][32][33]. The slf genes of polyene biosynthesis reported here represent an additional starting point for such natural product diversification

Conjugated nitrosoalkenes as Michael acceptors in carbon–carbon bond forming reactions: a review and perspective

• Yaroslav D. Boyko,
• Valentin S. Dorokhov,
• Alexey Yu. Sukhorukov and
• Sema L. Ioffe

Beilstein J. Org. Chem. 2017, 13, 2214–2234, doi:10.3762/bjoc.13.220

• displayed more potent activities than the parent natural product (Scheme 26) [63]. In their synthesis, 5-bromo-1H-indole was converted to the corresponding functionalized oxime 73 upon the action of ethyl bromopyruvate oxime in the presence of Na2CO3 in 60% yield. The adduct was transformed into carboxylic

Synthesis of substituted Z-styrenes by Hiyama-type coupling of oxasilacycloalkenes: application to the synthesis of a 1-benzoxocane

• James R. Vyvyan,
• Courtney A. Engles,
• Scott L. Bray,
• Erik D. Wold,
• Christopher L. Porter and
• Mikhail O. Konev

Beilstein J. Org. Chem. 2017, 13, 2122–2127, doi:10.3762/bjoc.13.209

• ][17][18][19][20][21] and enyne metathesis [22][23]. We became interested in the cross-coupling of cyclic siloxanes in the context of preparing trisubstituted Z-styrenes for the synthesis of natural product targets [24]. Heliannuol A was the first member of a family of allelopathic [25][26][27

• of helianane. Conclusion In summary, we have confirmed the Hiyama cross-coupling of cyclic siloxanes is an efficient route to Z-trisubstituted styrenes that are useful for the synthesis of natural product frameworks. Although yields are low under the conditions attempted, a proof of concept has been

18-Hydroxydolabella-3,7-diene synthase – a diterpene synthase from Chitinophaga pinensis

• Jeroen S. Dickschat,
• Jan Rinkel,
• Patrick Rabe,
• Arman Beyraghdar Kashkooli and
• Harro J. Bouwmeester

Beilstein J. Org. Chem. 2017, 13, 1770–1780, doi:10.3762/bjoc.13.171

• ) for a compound isolated from the brown alga Dictyota dichotoma [30] was suggested (Scheme 2C). The same natural product is known from the higher plant Aglaia odorata [31], but in this case the reason for the assignment of the reported absolute configuration is unclear, because no optical rotation has

An effective Pd nanocatalyst in aqueous media: stilbene synthesis by Mizoroki–Heck coupling reaction under microwave irradiation

• Carolina S. García,
• Paula M. Uberman and
• Sandra E. Martín

Beilstein J. Org. Chem. 2017, 13, 1717–1727, doi:10.3762/bjoc.13.166

• interested in investigating the synthetic applicability of this catalyst in a natural product synthesis. For this purpose, the reaction between aryl bromide 1d and 4-acetoxystyrene (2d) was studied to obtain (E)-pterostilbene (19, Scheme 1). Several derivatives of polyphenolic stilbenes as (E)-pterostilbene

The chemistry and biology of mycolactones

• Matthias Gehringer and
• Karl-Heinz Altmann

Beilstein J. Org. Chem. 2017, 13, 1596–1660, doi:10.3762/bjoc.13.159

• toxin. III. Total synthesis of mycolactones The fascinating biology and the challenging structural features of mycolactones have attracted significant interest from research groups worldwide with a focus on natural product synthesis. In this chapter the synthetic work on mycolactones that has been

A new member of the fusaricidin family – structure elucidation and synthesis of fusaricidin E

• Marcel Reimann,
• Louis P. Sandjo,
• Luis Antelo,
• Eckhard Thines,
• Isabella Siepe and
• Till Opatz

Beilstein J. Org. Chem. 2017, 13, 1430–1438, doi:10.3762/bjoc.13.140

• (Figure 1). Thus, an assumed stereoisomer (containing D-allo-Ile) of the new fusaricidin member was synthesized based on analogy to known members of the series and compared to the natural product [8]. Results and Discussion Isolation and structure elucidation The Paenibacillus strain was cultivated on

• removed to yield the natural product 1. HPLC analysis showed only a single peak with the same retention time, mass and fragmentation pattern as the natural product. After purification by preparative HPLC, NMR spectroscopy confirmed that the assumed structure and stereochemistry of the natural product was

BODIPY-based fluorescent liposomes with sesquiterpene lactone trilobolide

• Ludmila Škorpilová,
• Silvie Rimpelová,
• Michal Jurášek,
• Miloš Buděšínský,
• Jana Lokajová,
• Roman Effenberg,
• Petr Slepička,
• Tomáš Ruml,
• Eva Kmoníčková,
• Pavel B. Drašar and
• Zdeněk Wimmer

Beilstein J. Org. Chem. 2017, 13, 1316–1324, doi:10.3762/bjoc.13.128

• , Alej Svobody 76, 323 00 Pilsen, Czech Republic 10.3762/bjoc.13.128 Abstract Like thapsigargin, which is undergoing clinical trials, trilobolide is a natural product with promising anticancer and anti-inflammatory properties. Similar to thapsigargin, it has limited aqueous solubility that strongly

Biomimetic molecular design tools that learn, evolve, and adapt

• David A Winkler

Beilstein J. Org. Chem. 2017, 13, 1288–1302, doi:10.3762/bjoc.13.125

• ]. Intensive experimental effort has been applied to the deliberate reengineering of biosynthetic pathways for natural product synthesis which, when combined with directed evolution, can generate libraries of potentially bioactive organic molecules with significant diversity and high chemical complexity [4

Strategies toward protecting group-free glycosylation through selective activation of the anomeric center

• A. Michael Downey and
• Michal Hocek

Beilstein J. Org. Chem. 2017, 13, 1239–1279, doi:10.3762/bjoc.13.123

• subject of much debate (Scheme 4B) [21]. The utility of these enzymes is very clear and even extends beyond glycobiology. They are applicable to natural product synthesis as the aglycone of a natural product glycoside can be forged to the saccharide component using either a natural or engineered GT [22

Synthesis of alkynyl-substituted camphor derivatives and their use in the preparation of paclitaxel-related compounds

• M. Fernanda N. N. Carvalho,
• Rudolf Herrmann and
• Gabriele Wagner

Beilstein J. Org. Chem. 2017, 13, 1230–1238, doi:10.3762/bjoc.13.122

• example for such a “chiral pool” starting material is camphor. Both its substituents and its bicyclic skeleton can easily be modified and adapted to the purpose at hand, e.g., natural product synthesis [5]. The Wagner–Meerwein and Nametkin-type rearrangements are the most common reaction patterns [6] and

An eco-compatible strategy for the diversity-oriented synthesis of macrocycles exploiting carbohydrate-derived building blocks

• Sushil K. Maurya and
• Rohit Rana

Beilstein J. Org. Chem. 2017, 13, 1106–1118, doi:10.3762/bjoc.13.110

• Sushil K. Maurya Rohit Rana Natural Product Chemistry and Process Development Division, CSIR- Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, 176 061, India Academy of Scientific and Innovative Research, CSIR- Institute of Himalayan Bioresource Technology, Palampur

A strategic approach to [6,6]-bicyclic lactones: application towards the CD fragment of DHβE

• Tue Heesgaard Jepsen,
• Emil Glibstrup,
• François Crestey,
• Anders A. Jensen and
• Jesper Langgaard Kristensen

Beilstein J. Org. Chem. 2017, 13, 988–994, doi:10.3762/bjoc.13.98

• have previously deconstructed a selection of aromatic erythrinanes, and interestingly the SAR showed CD fragments with retained affinity, subtype specificity, and competitive antagonist property relative to the parent natural product [10]. Inspired by these results, we embarked on the synthesis of the

• results obtained for the AB fragments which retained the affinity comparable to the parent natural product (DHβE), and indicates that the Balle’s pharmacophore model is the best description of the key binding interactions of DHβE to α4β2, provided that the AB and CD fragments bind similar to DHβE in the

• investigation of their pharmacological effects lacking the AB ring substructure present in the parent natural product. Even though the CD fragment proved exceedingly difficult to handle and to purify our results indicate that the absence of the methoxy group on the A ring is detrimental to the affinity. Further

Use of costic acid, a natural extract from Dittrichia viscosa, for the control of Varroa destructor, a parasite of the European honey bee

• Kalliopi Sofou,
• Demosthenis Isaakidis,
• Apostolos Spyros,
• Anita Büttner,
• Athanassios Giannis and
• Haralambos E. Katerinopoulos

Beilstein J. Org. Chem. 2017, 13, 952–959, doi:10.3762/bjoc.13.96

• tertiary and a secondary carbon, respectively. Concerning the absolute configuration of costic acid, we propose that it is the same as that reported by Bawdekar et al. [39] as indicated by a value of [α]D = + 24.03 (c 1.3, MeOH) ([α]D = + 23.42 (c 1.3, MeOH) [39]). Costic acid is a known natural product