Advances in the use of metal-free tetrapyrrolic macrocycles as catalysts

• Mandeep K. Chahal

Beilstein J. Org. Chem. 2024, 20, 3085–3112, doi:10.3762/bjoc.20.257

• and tested them as HER electrocatalysts using acetic acid as an alternative proton source [124]. Preliminary results indicated that the biscorrole (1.5 mg, 1 μM) could produce 0.84 mL of H₂ during 1 hour of electrolysis, as confirmed by gas chromatography (GC). Villagrán and co-workers reported a

The scent gland composition of the Mangshan pit viper, Protobothrops mangshanensis

• Jonas Holste,
• Paul Weldon,
• Donald Boyer and
• Stefan Schulz

Beilstein J. Org. Chem. 2024, 20, 2644–2654, doi:10.3762/bjoc.20.222

• acids, comparison with in-house and other spectral libraries revealed no close match with known compounds. High-resolution EI gas chromatography (HREI–GC–MS) of compound D suggested a molecular formula of C14H26O2 (m/z 226.18962 [M]+, calcd 226.19328), and two double-bond equivalents. The characteristic

C3-Alkylation of furfural derivatives by continuous flow homogeneous catalysis

• Grédy Kiala Kinkutu,
• Catherine Louis,
• Myriam Roy,
• Juliette Blanchard and
• Julie Oble

Beilstein J. Org. Chem. 2023, 19, 582–592, doi:10.3762/bjoc.19.43

• File 1, p. S8). All the content of the loop is thus sent into the reactor. This system is coupled to a gas chromatography oven, in which the stainless-steel tubular reactor (length: 4.6 m, internal diameter of 0.8 millimeter, corresponding to a volume of 2.31 mL) is placed. The system pressure is

Discrimination of β-cyclodextrin/hazelnut (Corylus avellana L.) oil/flavonoid glycoside and flavonolignan ternary complexes by Fourier-transform infrared spectroscopy coupled with principal component analysis

• Nicoleta G. Hădărugă,
• Gabriela Popescu,
• Dina Gligor (Pane),
• Cristina L. Mitroi,
• Sorin M. Stanciu and
• Daniel Ioan Hădărugă

Beilstein J. Org. Chem. 2023, 19, 380–398, doi:10.3762/bjoc.19.30

• the level of degradation compounds were determined by thermal methods (thermogravimetry-differential thermogravimetry, TG–DTG, and differential scanning calorimetry, DSC) and gas chromatography–mass spectrometry (GC–MS), respectively. The addition of sodium caseinate during the CD complexation of fish

• Sigma-Aldrich, St. Louis, MO, USA). Finally, 2-propanol (ACS reagent, Reag. Ph. Eur.) used for FTIR cleaning was obtained from Merck & Co., Inc., Rahway, NJ, USA. Gas chromatography–mass spectrometry (GC–MS) The FA profile of the hazelnut oil was determined by GC–MS, after derivatization to FAMEs

Germacrene B – a central intermediate in sesquiterpene biosynthesis

• Houchao Xu and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2023, 19, 186–203, doi:10.3762/bjoc.19.18

• lupulus by preparative gas chromatography [22] and from Citrus junos [23], followed by isolations from Stenocalyx michelii [24], Citrus aurantifolia [25], and Solidago canadensis [26]. Germacrene B has been ascribed a warm, sweet, woody-spicy, geranium-like odour and is an important flavour constituent of

Identification and determination of the absolute configuration of amorph-4-en-10β-ol, a cadinol-type sesquiterpene from the scent glands of the African reed frog Hyperolius cinnamomeoventris

• Angelique Ladwig,
• Markus Kroll and
• Stefan Schulz

Beilstein J. Org. Chem. 2023, 19, 167–175, doi:10.3762/bjoc.19.16

• absolute configuration of the sesquiterpene A was elucidated by enantioselective gas chromatography. The enantiomers of the alcohols could be separated on a Hydrodex β-6TBDM phase (Figure 5). This allowed to determine the absolute configuration of the sesquiterpene A. A coinjection of a gland extract with

• amorph-4-ene-10β-ol known from plants. A short synthesis using an organocatalytic approach through a tandem Mannich/intramolecular Diels–Alder reaction led to a mixture of cadinols, which was used for the assignment of the natural cadinol structures and their stereoisomers. Keywords: Anura; chiral gas

• chromatography; enantioselective synthesis; GC/MS; semiochemicals; Introduction Hyperolius cinnamomeoventris (Figure 1) is one of the largest species of reed frogs (Hyperoliidae), which are commonly found in Africa, south of the Sahara. Males of the Hyperoliidae possess a characteristic yellow gular patch on

Characterization of a new fusicoccane-type diterpene synthase and an associated P450 enzyme

• Jia-Hua Huang,
• Jian-Ming Lv,
• Liang-Yan Xiao,
• Qian Xu,
• Fu-Long Lin,
• Gao-Qian Wang,
• Guo-Dong Chen,
• Sheng-Ying Qin,
• Dan Hu and
• Hao Gao

Beilstein J. Org. Chem. 2022, 18, 1396–1402, doi:10.3762/bjoc.18.144

• ]. The resulted transformant was cultivated in the modified Czapek–Dox medium for four days, and then mycelia were harvested and extracted for analysis. Upon gas chromatography-mass spectrometry (GC–MS) analysis, we observed an additional peak at m/z = 272 [M]+ from the tadA harboring transformant

Cyclodextrin-based Schiff base pro-fragrances: Synthesis and release studies

• Attila Palágyi,
• Jindřich Jindřich,
• Juraj Dian and
• Sophie Fourmentin

Beilstein J. Org. Chem. 2022, 18, 1346–1354, doi:10.3762/bjoc.18.140

• benzaldehyde) and static headspace-gas chromatography (for benzaldehyde, heptanal, and 5-methylfurfural). The aldehyde release rate from the imine was shown to depend substantially on the pH from the solution and the air humidity from the solid state. Keywords: aldehyde; controlled release; cyclodextrin

• . The aldehyde release itself from the buffers and by humidity was followed by static headspace-gas chromatography (SH-GC). Results and Discussion Synthesis of pro-fragrances 6I-Amino-6I-deoxy-β-cyclodextrin (amino-β-CD, 1) was chosen as the most appropriate amino-cyclodextrin derivative due to its

• in ppm, and the values of the interaction constants (J) in Hz. Standard numbering for cyclodextrin’s glucose units and numbering with apostrophes for substituents were used to assign NMR signals. Static headspace-gas chromatography measurements were conducted with an Agilent headspace autosampler

The stereochemical course of 2-methylisoborneol biosynthesis

• Binbin Gu,
• Anwei Hou and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2022, 18, 818–824, doi:10.3762/bjoc.18.82

• 2-methylisoborneol from (S)-2-Me-LPP may be explained by isomerization to 2-Me-GPP and then to (R)-2-Me-LPP. Keywords: biosynthesis; enantioselective synthesis; enzyme mechanisms; gas chromatography; terpenoids; Introduction After its first discovery from Streptomyces [1][2], it has been

• with calf intestinal phosphatase (CIP). The thus obtained compounds 6a and 6b were analyzed by gas chromatography on a chiral stationary phase, revealing that the materials were unchanged and still of very high enantiomeric purity (>99% ee, Figure S5 in Supporting Information File 1). Conversion of

Synthesis of piperidine and pyrrolidine derivatives by electroreductive cyclization of imine with terminal dihaloalkanes in a flow microreactor

• Yuki Naito,
• Naoki Shida and
• Mahito Atobe

Beilstein J. Org. Chem. 2022, 18, 350–359, doi:10.3762/bjoc.18.39

• column (Mightysil RP-18 GP II 250-4.6 (5 µm), Cica) using a mixture of H2O/MeCN/H3PO4 (60/40/0.1%) as a mobile phase. All chromatograms were recorded using an LC workstation (LabSolutions DB, Shimadzu). Helium gas was used as a carrier gas for the gas chromatography/mass spectrometry (GC–MS) analyses. 1H

Volatile emission and biosynthesis in endophytic fungi colonizing black poplar leaves

• Christin Walther,
• Pamela Baumann,
• Katrin Luck,
• Beate Rothe,
• Peter H. W. Biedermann,
• Jonathan Gershenzon,
• Tobias G. Köllner and
• Sybille B. Unsicker

Beilstein J. Org. Chem. 2021, 17, 1698–1711, doi:10.3762/bjoc.17.118

• the presence of 10 mM MgCl2. Enzyme products were extracted from the assays with hexane and analyzed using gas chromatography–mass spectrometry. Myrcene (9); (E)-β-ocimene (10); (Z)-β-ocimene (11); linalool (5); (E,E)-α-farnesene (12); (E)-β-caryophyllene (1); (E,E)-β-springene (13); (E,E,E)-α

Breakdown of 3-(allylsulfonio)propanoates in bacteria from the Roseobacter group yields garlic oil constituents

• Anuj Kumar Chhalodia and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2021, 17, 569–580, doi:10.3762/bjoc.17.51

• stripping apparatus (CLSA) [33], followed by the extraction of the filters with CH2Cl2 and analysis by gas chromatography–mass spectrometry (GC–MS) of the resulting extracts. Most of the compounds were readily identified by the comparison of their mass spectra and retention indices to published data. Every

Identification of volatiles from six marine Celeribacter strains

• Anuj Kumar Chhalodia,
• Jan Rinkel,
• Dorota Konvalinkova,
• Jörn Petersen and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2021, 17, 420–430, doi:10.3762/bjoc.17.38

• -deuterated analogs by gas chromatography [61]). The base peak appears at m/z = 168, demonstrating its formation with participation of one deuterium from the S-methyl group. Analogous results were obtained by feeding of (methyl-13C)methionine, showing incorporation into 37 (74%, Figure S1C in Supporting

• Information File 1), 38 (71%, Figure S1G in Supporting Information), and the MeS group of 41 (71%, Figure 3C; the signal at m/z = 213 represents unlabeled 41 that, in contrast to a deuterated compound, cannot be separated from 13C-labeled 41 by gas chromatography). Furthermore, feeding of [34S]DMSP gave an

¹⁹F NMR as a tool in chemical biology

• Diana Gimenez,
• Aoife Phelan,
• Cormac D. Murphy and
• Steven L. Cobb

Beilstein J. Org. Chem. 2021, 17, 293–318, doi:10.3762/bjoc.17.28

• widely used by those investigating the biodegradation of fluorinated xenobiotics, with researchers more commonly relying on liquid or gas chromatography–mass spectrometry methods. Objectively, these techniques are much more sensitive than 19F NMR, provide more structural information and are probably more

On the mass spectrometric fragmentations of the bacterial sesterterpenes sestermobaraenes A–C

• Anwei Hou and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2020, 16, 2807–2819, doi:10.3762/bjoc.16.231

• enzymatic conversion of the correspondingly 13C-labelled isoprenyl diphosphate precursors with the sestermobaraene synthase from Streptomyces mobaraensis. The main compounds sestermobaraenes A, B, and C were analysed by gas chromatography–mass spectrometry (GC–MS), allowing for a deep mechanistic

• water, simple alcohols. These volatile compounds can efficiently be trapped by specialised methods including the closed-loop stripping apparatus (CLSA) [4] technique or solid-phase microextraction (SPME) [5][6], and then analysed by gas chromatography–mass spectrometry (GC–MS) [7]. Through these and

3-Acetoxy-fatty acid isoprenyl esters from androconia of the ithomiine butterfly Ithomia salapia

• Florian Mann,
• Daiane Szczerbowski,
• Lisa de Silva,
• Melanie McClure,
• Marianne Elias and
• Stefan Schulz

Beilstein J. Org. Chem. 2020, 16, 2776–2787, doi:10.3762/bjoc.16.228

• eluting ester is isoprenyl (Z)-3-acetoxy-13-octadecenoate, while the earlier eluting one is the 11-isomer. With optically active material in hand, the absolute configuration of 12 was determined by enantioselective gas chromatography. Because direct separation of the large esters seemed to be difficult

Efficient [(NHC)Au(NTf₂)]-catalyzed hydrohydrazidation of terminal and internal alkynes

• Maximillian Heidrich and
• Herbert Plenio

Beilstein J. Org. Chem. 2020, 16, 2080–2086, doi:10.3762/bjoc.16.175

• using silica gel 60 F254 (0.2 mm) on alumina plates. For preparative chromatography silica gel 60 (70–200 µm) was used. Measurements of the high resolution mass spectra (HRMS) were performed on a Bruker Daltonics Autoflex Speed TOF. Gas chromatographic data was obtained on a Clarus 500 gas

• chromatography system. Synthesis of gold complex 1. To a solution of the (NHC)AuCl complex 1a (60 mg, 0.043 mmol, 1 equiv) in DCM (5 mL) silver bis(trifluoromethanesulfonyl)amide (18 mg, 0.043 mmol, 1 equiv) was added and the mixture was stirred at rt for 30 min. The formed suspension was filtered through a plug

Preparation of 2-phospholene oxides by the isomerization of 3-phospholene oxides

• Péter Bagi,
• Réka Herbay,
• Nikolett Péczka,
• Zoltán Mucsi,
• István Timári and
• György Keglevich

Beilstein J. Org. Chem. 2020, 16, 818–832, doi:10.3762/bjoc.16.75

• °C in neat, and the progression of the reactions was followed by gas chromatography for two days using biphenyl as internal standard. According to repeated experiments, the errors in measured relative concentrations were below 5%. The concentration curves undoubtedly refer to an equilibrium reaction

KOt-Bu-promoted selective ring-opening N-alkylation of 2-oxazolines to access 2-aminoethyl acetates and N-substituted thiazolidinones

• Qiao Lin,
• Shiling Zhang and
• Bin Li

Beilstein J. Org. Chem. 2020, 16, 492–501, doi:10.3762/bjoc.16.44

• (0.5 mmol, 56 mg), 2-oxazoline (0.5 mmol), benzyl bromide (1.0 mmol) and DMC (2 mL) were introduced in a tube, equipped with magnetic stirring bar and the mixture was stirred at 50 °C. After 16 h, the progress of the reaction was analyzed by gas chromatography. The solvent was then evaporated under

• mmol), benzyl chloride (1.0 mmol) and DMC (2 mL) were introduced in a tube, equipped with magnetic stirring bar and the mixture was stirred at 80 °C. After 16 h, the progress of the reaction was analyzed by gas chromatography. The solvent was then evaporated under vacuum and the desired product was

• DMC (2 mL) were introduced in a tube, equipped with magnetic stirring bar and the mixture was stirred at 80 °C. After 16 h, the progress of the reaction was analyzed by gas chromatography. The solvent was then evaporated under vacuum and the desired product was purified by silica gel chromatography

Efficient method for propargylation of aldehydes promoted by allenylboron compounds under microwave irradiation

• Jucleiton J. R. Freitas,
• Queila P. S. B. Freitas,
• Silvia R. C. P. Andrade,
• Juliano C. R. Freitas,
• Roberta A. Oliveira and
• Paulo H. Menezes

Beilstein J. Org. Chem. 2020, 16, 168–174, doi:10.3762/bjoc.16.19

• volatile materials were removed using a rotary evaporator. The procedure was monitored by gas chromatography and was repeated until the crude mixture contained less than 1 mol % of pinacol remaining. The results are described in Table 3. Although the desired products 2a–t having been obtained along with a

Emission and biosynthesis of volatile terpenoids from the plasmodial slime mold Physarum polycephalum

• Xinlu Chen,
• Tobias G. Köllner,
• Wangdan Xiong,
• Guo Wei and
• Feng Chen

Beilstein J. Org. Chem. 2019, 15, 2872–2880, doi:10.3762/bjoc.15.281

• flakes as nutrient source and subjected to volatile profiling at two time points: 8 days and 18 days after the transfer of plasmodia to a fresh agar plate. Volatiles were collected from the headspace using a solid phase-microextraction fiber and analyzed using gas chromatography–mass spectrometry (GC–MS

Genome mining in Trichoderma viride J1-030: discovery and identification of novel sesquiterpene synthase and its products

• Xiang Sun,
• You-Sheng Cai,
• Yujie Yuan,
• Guangkai Bian,
• Ziling Ye,
• Zixin Deng and
• Tiangang Liu

Beilstein J. Org. Chem. 2019, 15, 2052–2058, doi:10.3762/bjoc.15.202

• construct the plasmid pXS222. Next, pXS222 was transformed into BL21 to overexpress and purify Tvi09626 (Figure S2, Supporting Information File 1). The substrates GPP, FPP and GGPP were incubated with the protein individually and the products were detected and analysed by gas chromatography/mass

Analysis of sesquiterpene hydrocarbons in grape berry exocarp (Vitis vinifera L.) using in vivo-labeling and comprehensive two-dimensional gas chromatography–mass spectrometry (GC×GC–MS)

• Philipp P. Könen and
• Matthias Wüst

Beilstein J. Org. Chem. 2019, 15, 1945–1961, doi:10.3762/bjoc.15.190

• aroma profile of grapes (Vitis vinifera L.) at the time of physiological ripening. To investigate these natural compounds, freshly harvested, ripe berries of the red wine variety Lemberger (Vitis vinifera subsp. vinifera L.) were analyzed using comprehensive two-dimensional gas chromatography (GC×GC

• various cyclization reactions [9][10][11][12]. In order to analyze the biosynthetic pathways of sesquiterpene hydrocarbons in grape berries, a method was developed by us using comprehensive two-dimensional gas chromatography (GC×GC) coupled to a time-of-flight mass spectrometer (TOF–MS) after headspace

• -solid phase microextraction (HS-SPME). The comprehensive two-dimensional gas chromatography first demonstrated on an oil sample in 1991 is suitable for the analysis of highly complex samples [13]. Using GC×GC, all analytes of a sample can be separated on two different capillary separation columns of

Efficient synthesis of 4-substituted-ortho-phthalaldehyde analogues: toward the emergence of new building blocks

• Clémence Moitessier,
• Ahmad Rifai,
• Pierre-Edouard Danjou,
• Isabelle Mallard and
• Francine Cazier-Dennin

Beilstein J. Org. Chem. 2019, 15, 721–726, doi:10.3762/bjoc.15.67

• dialdehydes in fluorometric methods with regard to the analysis of amino acids and biogenic amines [1][2][3]. It is also used as a derivatization reagent in order to quantify hydrazine by gas chromatography coupled with a mass spectrometer detector [4]. Recently, it was adopted for the analysis of γ

Systematic synthetic study of four diastereomerically distinct limonene-1,2-diols and their corresponding cyclic carbonates

• Hiroshi Morikawa,
• Jun-ichi Yamaguchi,
• Shun-ichi Sugimura,
• Masato Minamoto,
• Yuuta Gorou,
• Hisatoyo Morinaga and
• Suguru Motokucho

Beilstein J. Org. Chem. 2019, 15, 130–136, doi:10.3762/bjoc.15.13

• conditions with high diastereomeric stereoselectivity and, in most cases, moderate to high yields. To compare the four LMdiols and the four LM5CCs, a set of the characteristic analytical data such as melting points, optical rotation values and Kovats retention index values in gas chromatography was listed in