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Search for "transcriptome mining" in Full Text gives 3 result(s) in Beilstein Journal of Organic Chemistry.

Young investigators in natural products chemistry, biosynthesis, and enzymology

  • Jeffrey D. Rudolf,
  • Lena Barra and
  • Takayoshi Awakawa

Beilstein J. Org. Chem. 2024, 20, 2720–2721, doi:10.3762/bjoc.20.229

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  • present this collection of 19 Full Research Papers, three Letters, and nine Review articles from our colleagues around the world. Topics covered include natural product discovery efforts from a variety of organisms, genome and transcriptome mining and bioinformatics of natural products, biosynthetic gene
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Editorial
Published 29 Oct 2024

Mining raw plant transcriptomic data for new cyclopeptide alkaloids

  • Draco Kriger,
  • Michael A. Pasquale,
  • Brigitte G. Ampolini and
  • Jonathan R. Chekan

Beilstein J. Org. Chem. 2024, 20, 1548–1559, doi:10.3762/bjoc.20.138

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  • Draco Kriger Michael A. Pasquale Brigitte G. Ampolini Jonathan R. Chekan Department of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, NC, USA 10.3762/bjoc.20.138 Abstract In recent years, genome and transcriptome mining have dramatically expanded the rate of
  • ; transcriptome mining; Introduction Plants are prolific producers of cyclic peptide natural products, making 1000s of different molecules [1]. While the orbitide [2] and cyclotide [3] classes of peptides are well known, it has been recently discovered that a new class of molecules called burpitides are also
  • lack an oxidative decarboxylation of the C-terminus (Figure 3, arabipeptin A). Our transcriptome mining results further support the prevalence of cyclopeptide alkaloids in the Rubiaceae family. Chiococca alba (Snowberry), Cinchona calisaya (Yellow Cinchona), Gardenia jasminoides (Cape Jasmine), C
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Full Research Paper
Published 11 Jul 2024

Cytochrome P450 monooxygenase-mediated tailoring of triterpenoids and steroids in plants

  • Karan Malhotra and
  • Jakob Franke

Beilstein J. Org. Chem. 2022, 18, 1289–1310, doi:10.3762/bjoc.18.135

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  • celastrol, a potent anti-obesity metabolite [42][43]. In two independent studies, transcriptome mining and functional studies in Nicotiana benthamiana were used to identify the CYPs CYP712K1, CYP712K2, CYP712K3, and CYP712K4 capable of oxidising friedelin (8) into polpunonic acid via an aldehyde
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Review
Published 21 Sep 2022
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