Azologization and repurposing of a hetero-stilbene-based kinase inhibitor: towards the design of photoswitchable sirtuin inhibitors

• Christoph W. Grathwol,
• Nathalie Wössner,
• Sören Swyter,
• Adam C. Smith,
• Enrico Tapavicza,
• Robert K. Hofstetter,
• Anja Bodtke,
• Manfred Jung and
• Andreas Link

Beilstein J. Org. Chem. 2019, 15, 2170–2183, doi:10.3762/bjoc.15.214

• ionization single quadrupole MS (LCMS-2020) controlled by Shimadzu LabSolution software (Version 5.91). Chromatographic purification of products was performed by flash chromatography on silica gel (20–45 µm, Carl Roth) applying pressured air up to 0.8 bar. NMR spectra were recorded on a Bruker Avance III

• apparatus from Büchi and are uncorrected. High accuracy mass spectra were recorded on a Shimadzu LCMS-IT-TOF using ESI ionization. Purity of final compounds was determined by HPLC with DAD (applying the 100% method at 220 nm). Preparative and analytical HPLC were performed using Shimadzu devices CBM-20A, LC

Synthesis and anion binding properties of phthalimide-containing corona[6]arenes

• Meng-Di Gu,
• Yao Lu and
• Mei-Xiang Wang

Beilstein J. Org. Chem. 2019, 15, 1976–1983, doi:10.3762/bjoc.15.193

• investigate their anion binding behaviour. Taking compound 3a as a representative, we examined the interaction of macrocycles 3 with anions of tetra-n-butylammonium salts by means of electron spray ionization (ESI) mass spectrometry. It was found that the mass spectra of mixed samples of 3a with n-Bu4NX gave

Synthesis of a [6]rotaxane with singly threaded γ-cyclodextrins as a single stereoisomer

• Jason Yin Hei Man and
• Ho Yu Au-Yeung

Beilstein J. Org. Chem. 2019, 15, 1829–1837, doi:10.3762/bjoc.15.177

• HKU Foundation Postgraduate Fellowship. We acknowledge UGC funding administered by The University of Hong Kong for support of the Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometry Facilities under support for Interdisciplinary Research in Chemical Science.

Complexation of 2,6-helic[6]arene and its derivatives with 1,1′-dimethyl-4,4′-bipyridinium salts and protonated 4,4'-bipyridinium salts: an acid–base controllable complexation

• Jing Li,
• Qiang Shi,
• Ying Han and
• Chuan-Feng Chen

Beilstein J. Org. Chem. 2019, 15, 1795–1804, doi:10.3762/bjoc.15.173

• -polar solvent, acetone hampers or competes the intermolecular non-covalent interactions between the hosts and the guests, and thus resulted in a decrease of the host–guest complexation. ESIMS studies of the formation of host–guest complexes The electrospray ionization (ESI) mass spectra also confirmed

Functional panchromatic BODIPY dyes with near-infrared absorption: design, synthesis, characterization and use in dye-sensitized solar cells

• Quentin Huaulmé,
• Cyril Aumaitre,
• Outi Vilhelmiina Kontkanen,
• David Beljonne,
• Alexandra Sutter,
• Gilles Ulrich,
• Renaud Demadrille and
• Nicolas Leclerc

Beilstein J. Org. Chem. 2019, 15, 1758–1768, doi:10.3762/bjoc.15.169

• ) Grafting the triphenylamine donor moieties on the thiophene-vinylene bridge only slightly (by ca. 0.1 eV) lowers the ionization potential of the dyes, compare (1,2) to (3,4); this is explained by the fact that the HOMO molecular orbital mostly spreads on the BODIPY-vinylthiophene core of the molecules

Synthesis, enantioseparation and photophysical properties of planar-chiral pillar[5]arene derivatives bearing fluorophore fragments

• Guojuan Li,
• Chunying Fan,
• Guo Cheng,
• Wanhua Wu and
• Cheng Yang

Beilstein J. Org. Chem. 2019, 15, 1601–1611, doi:10.3762/bjoc.15.164

• , 131.22, 130.18, 128.34, 128.30, 127.42, 126.81, 126.52, 125.30, 125.07. The electrospray ionization mass spectrum of 2 is shown in Figure S3, Supporting Information File 1. HRESIMS (m/z): [M]+ calcd for [C20H14]+, 254.1096, found, 254.1125; [M + Na]+ calcd for [C20H14Na]+, 277.0993; found, 277.1268

• , 127.38, 126.93, 125.52, 122.71. The electrospray ionization mass spectrum of 3 is shown in Figure S6, Supporting Information File 1. HRESIMS (m/z): [M]+ calcd for [C20H13Br]+, 332.0201; found, 332.1679. Synthesis of 4: Compound 4 was prepared by a similar procedure as that used for 2, but with 3 (1.5 g

• spectrum of 4 is shown in Figure S8, Supporting Information File 1. 13C NMR (100 MHz, CDCl3) 154.97, 139.08, 136.98, 136.75, 132.57, 131.31, 130.18, 129.89, 129.66, 128.39, 127.44, 126.97, 126.94, 124.97, 124.94, 120.78, 115.35, 115.27. The electrospray ionization mass spectrum of 4 is shown in Figure S9

Superelectrophilic carbocations: preparation and reactions of a substrate with six ionizable groups

• Sean H. Kennedy,
• Makafui Gasonoo and
• Douglas A. Klumpp

Beilstein J. Org. Chem. 2019, 15, 1515–1520, doi:10.3762/bjoc.15.153

• Sean H. Kennedy Makafui Gasonoo Douglas A. Klumpp Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, IL 60178, USA 10.3762/bjoc.15.153 Abstract A substrate has been prepared having two triarylmethanol centers and four pyridine-type substituent groups. Upon ionization

• benzaldehyde. A nickel-catalyzed procedure gives the dipyridyl intermediate 7 [13]. This is easily oxidized to the diketone 8 and reaction of this substance with 2-lithiopyridine gives the precursor 9. The diol 9 is a substrate with six ionizable groups. Upon ionization in superacidic CF3SO3H (triflic acid

• explained by mechanisms involving highly ionized intermediates. It is proposed that compound 9 initially reacts in excess superacid to give the tetracationic species 12 (Scheme 4). Protonation of the hydroxy groups leads to immediate ionization and formation of the carbocation centers. For related

2,3-Dibutoxynaphthalene-based tetralactam macrocycles for recognizing precious metal chloride complexes

• Li-Li Wang,
• Yi-Kuan Tu,
• Huan Yao and
• Wei Jiang

Beilstein J. Org. Chem. 2019, 15, 1460–1467, doi:10.3762/bjoc.15.146

• isolated with yields of 22% and 19%, respectively. Electrospray ionization (ESI) mass spectra support the isolated products to be the [2 + 2] macrocycles (see Supporting Information File 1). As shown in Figure 1, the 1H NMR spectra are consistent with high-symmetry structures. There are slight differences

Anomeric sugar boronic acid analogues as potential agents for boron neutron capture therapy

• Daniela Imperio,
• Erika Del Grosso,
• Silvia Fallarini,
• Grazia Lombardi and
• Luigi Panza

Beilstein J. Org. Chem. 2019, 15, 1355–1359, doi:10.3762/bjoc.15.135

• about the solution behavior of these compounds we performed MS analysis. The mass spectrum of compound 8 in aqueous solution showed the presence of the cyclic boronic ester both in the positive ionization mode, as adduct at m/z 180 ([M + NH4]+) and m/z 185 ([M + Na]+), and in the negative ionization

Genomics-inspired discovery of massiliachelin, an agrochelin epimer from Massilia sp. NR 4-1

• Jan Diettrich,
• Hirokazu Kage and
• Markus Nett

Beilstein J. Org. Chem. 2019, 15, 1298–1303, doi:10.3762/bjoc.15.128

• Nucleoshell RP18 column (150 × 2.0 mm, Macherey-Nagel) using an Agilent 1260 Infinity LC system combined with a Compact quadrupole-time of flight (Q-TOF) mass spectrometer (Bruker Daltonics). The Q-TOF mass spectrometer was interfaced with an electrospray ionization source. NMR spectra were recorded on a

Bambusuril analogs based on alternating glycoluril and xylylene units

• Tomáš Lízal and
• Vladimír Šindelář

Beilstein J. Org. Chem. 2019, 15, 1268–1274, doi:10.3762/bjoc.15.124

• ESI/APCI as an ion source and a manual pump for sampling. Matrix-assisted laser desorption ionization–time-of-flight mass spectra (MALDI–TOF MS) were measured on a MALDI–TOF MS UltrafleXtreme (Bruker Daltonics) and samples were ionized with the aid of a Nd:YAG laser (355 nm) from α-cyano-4

Self-assembly behaviors of perylene- and naphthalene-crown macrocycle conjugates in aqueous medium

• Xin Shen,
• Bo Li,
• Tiezheng Pan,
• Jianfeng Wu,
• Yangxin Wang,
• Jie Shang,
• Yan Ge,
• Lin Jin and
• Zhenhui Qi

Beilstein J. Org. Chem. 2019, 15, 1203–1209, doi:10.3762/bjoc.15.117

• final compounds were carefully characterized by 1H and 13C NMR spectroscopy and electrospray ionization mass spectroscopy (ESI-MS, Supporting Information File 1, Figures S1–S8). UV–vis absorption and fluorescence spectra of 1 in different solvents, including CHCl3, MeCN, MeOH, H2O, and mixed solvent

Unexpected polymorphism during a catalyzed mechanochemical Knoevenagel condensation

• Sebastian Haferkamp,
• Andrea Paul,
• Adam A. L. Michalchuk and
• Franziska Emmerling

Beilstein J. Org. Chem. 2019, 15, 1141–1148, doi:10.3762/bjoc.15.110

• spectra were recorded with electrospray ionization time of flight mass spectrometry. A Q-TOF Ultima ESI-TOF mass spectrometer (Micromass, Germany) running at 4 kV capillary voltage and a cone voltage of 35 V was used. The collision energy was set to 5 eV. The source temperature was 120 °C whereas the

Novel (2-amino-4-arylimidazolyl)propanoic acids and pyrrolo[1,2-c]imidazoles via the domino reactions of 2-amino-4-arylimidazoles with carbonyl and methylene active compounds

• Victoria V. Lipson,
• Tetiana L. Pavlovska,
• Nataliya V. Svetlichnaya,
• Anna A. Poryvai,
• Nikolay Yu. Gorobets,
• Erik V. Van der Eycken,
• Irina S. Konovalova,
• Svetlana V. Shiskina,
• Alexander V. Borisov,
• Vladimir I. Musatov and
• Alexander V. Mazepa

Beilstein J. Org. Chem. 2019, 15, 1032–1045, doi:10.3762/bjoc.15.101

• as internal standard. The mass spectra were recorded on a Varian 1200L GC–MS instrument, ionization by EI at 70 eV. Fast atom bombardment (FAB) mass spectrometry was performed on a VG 70-70EQ mass spectrometer, equipped with an argon primary atom beam, and a m-nitrobenzyl alcohol matrix was used. LC

Towards the preparation of synthetic outer membrane vesicle models with micromolar affinity to wheat germ agglutinin using a dialkyl thioglycoside

• Dimitri Fayolle,
• Nathalie Berthet,
• Bastien Doumeche,
• Olivier Renaudet,
• Peter Strazewski and
• Michele Fiore

Beilstein J. Org. Chem. 2019, 15, 937–946, doi:10.3762/bjoc.15.90

• . Electrospray-ionization mass spectra (ESIMS) were recorded using a Bruker Q-Tof Micromass spectrometer. NMR spectra were recorded in DMSO-d6, CDCl3, CD3OD or DMF-d7 on a Bruker Avance 300 spectrometer at 300 and 75 MHz and on a Bruker Avance 400 at 400 and 100 MHz for 1H, and 13C, respectively. The attached

Easy, efficient and versatile one-pot synthesis of Janus-type-substituted fullerenols

• Marius Kunkel and
• Sebastian Polarz

Beilstein J. Org. Chem. 2019, 15, 901–905, doi:10.3762/bjoc.15.87

• formula of the compound is identified by electrospray ionization mass spectrometry (ESIMS). The degree of polyhydroxylation and the number of substituents is determined and confirmed with thermogravimetric analysis (TGA) and the nature of oxygen moieties as well as the substituents attached are evaluated

Coordination chemistry and photoswitching of dinuclear macrocyclic cadmium-, nickel-, and zinc complexes containing azobenzene carboxylato co-ligands

• Jennifer Klose,
• Tobias Severin,
• Peter Hahn,
• Alexander Jeremies,
• Jens Bergmann,
• Daniel Fuhrmann,
• Jan Griebel,
• Bernd Abel and
• Berthold Kersting

Beilstein J. Org. Chem. 2019, 15, 840–851, doi:10.3762/bjoc.15.81

• = Zn (5), Cd (6), Ni (7); L' = azo-CO2Me, M = Cd (8), Ni (9)), and characterized by elemental analysis, electrospray ionization mass spectrometry (ESIMS), IR, UV–vis and NMR spectroscopy (for diamagnetic Zn and Cd complexes) and X-ray single crystal structure analysis. The crystal structures of 3' and

Catalyst-free assembly of giant tris(heteroaryl)methanes: synthesis of novel pharmacophoric triads and model sterically crowded tris(heteroaryl/aryl)methyl cation salts

• Rodrigo Abonia,
• Luisa F. Gutiérrez,
• Braulio Insuasty,
• Jairo Quiroga,
• Kenneth K. Laali,
• Chunqing Zhao,
• Gabriela L. Borosky,
• Samantha M. Horwitz and
• Scott D. Bunge

Beilstein J. Org. Chem. 2019, 15, 642–654, doi:10.3762/bjoc.15.60

• and 9, respectively, packed with up to three different pharmacophors in a single molecule. The ability to perform these reactions in ethanol and even in water, with no catalysts is noteworthy. Representative methylium salts generated by ionization with DDQ/HPF6 exhibited 1H NMR signal broadening

Design, synthesis and spectroscopic properties of crown ether-capped dibenzotetraaza[14]annulenes

• Krzysztof M. Zwoliński and
• Julita Eilmes

Beilstein J. Org. Chem. 2019, 15, 617–622, doi:10.3762/bjoc.15.57

• been fully characterized by FTIR-ATR, 1H and 13C NMR spectroscopy, high-resolution electrospray ionization mass spectrometry (HR-ESIMS) and elemental analysis, and the results are in agreement with expected structures (vide infra). Both the crown ether-capped compounds 3a and 3b are highly symmetrical

Cyclopropene derivatives of aminosugars for metabolic glycoengineering

• Jessica Hassenrück and
• Valentin Wittmann

Beilstein J. Org. Chem. 2019, 15, 584–601, doi:10.3762/bjoc.15.54

• negative mode. The ionization method was electrospray (ESI) and for detection the time of flight (TOF) method was used. Analysis of recorded mass spectra was performed using the software Xcalibur by Thermo Fischer Scientific. 2,5-Dioxopyrrolidin-1-yl 2-methylcyclopropane-1-carboxylate (3): N

Syntheses and chemical properties of β-nicotinamide riboside and its analogues and derivatives

• Mikhail V. Makarov and
• Marie E. Migaud

Beilstein J. Org. Chem. 2019, 15, 401–430, doi:10.3762/bjoc.15.36

• more concentrated alkaline conditions (5 N KOH) as a result of a pyridinium ring opening–closure process [57]. It was also shown that the ionization of a diol fragment of NAD+ under alkaline conditions plays a very important role in the dissociative cleavage of the glycosyl bond of the “northern

Synthesis of C₃-symmetric star-shaped molecules containing α-amino acids and dipeptides via Negishi coupling as a key step

• Sambasivarao Kotha and
• Saidulu Todeti

Beilstein J. Org. Chem. 2019, 15, 371–377, doi:10.3762/bjoc.15.33

• resonance (13C NMR, 100 MHz and 125 MHz) spectra were recorded on a Bruker spectrometer. The high-resolution mass measurements were carried out by using electrospray ionization (ESI) spectrometer. Melting points were recorded on a Veego melting point apparatus. Negishi coupling product 10 Zinc (Zn) dust was

Sigmatropic rearrangements of cyclopropenylcarbinol derivatives. Access to diversely substituted alkylidenecyclopropanes

• Guillaume Ernouf,
• Jean-Louis Brayer,
• Christophe Meyer and
• Janine Cossy

Beilstein J. Org. Chem. 2019, 15, 333–350, doi:10.3762/bjoc.15.29

• were converted into α-allenic tertiary alcohols 22a–c (30–61%) The formation of alcohols 22a–c was explained by a mechanism involving ionization of the C4–O bond in imidates 21a–c, followed by ring opening of the alkylidenecyclopropyl cationic intermediates 23a–c [52] and addition of water to the

Computational characterization of enzyme-bound thiamin diphosphate reveals a surprisingly stable tricyclic state: implications for catalysis

• Ferran Planas,
• Michael J. McLeish and
• Fahmi Himo

Beilstein J. Org. Chem. 2019, 15, 145–159, doi:10.3762/bjoc.15.15

• structure of ThDP and its related intermediates and ionization states have undergone intensive investigation (summarized in references [2][52]). Most of these investigations have focused on the structure and properties of the covalently modified ThDP intermediates of diverse ThDP-dependent enzymes. Less

• attention has been paid to the variety of states the cofactor itself can adopt on the enzyme. As shown in Scheme 1, when various tautomers and ionization states are included, ThDP can adopt at least seven forms on any given ThDP-dependent enzyme. This is prior to any reaction taking place. Most of these are

Mechanistic studies of an L-proline-catalyzed pyridazine formation involving a Diels–Alder reaction with inverse electron demand

• Anne Schnell,
• J. Alexander Willms,
• S. Nozinovic and
• Marianne Engeser

Beilstein J. Org. Chem. 2019, 15, 30–43, doi:10.3762/bjoc.15.3

• -substituted tetrazines via a Diels–Alder reaction with inverse electron demand has been studied with NMR and with electrospray ionization mass spectrometry. A catalytic cycle with three intermediates has been proposed. An enamine derived from L-proline and acetone acts as an electron-rich dienophile in a [4

• intermediates mimic single steps of the proposed catalytic cycle in the gas phase. Thus, the charge-tagged catalyst proved one more time its superior effectiveness for the detection and study of reactive intermediates at low concentrations. Keywords: charge-tag; electrospray ionization; enamine organocatalysis

• ; L-proline; reaction mechanism; Introduction Electrospray (ESI) mass spectrometry (MS) [1] is well suited for studying reaction mechanisms as it is a soft ionization method leaving most species intact [1][2][3]. In addition, it is a fast analytical method [3] making it possible to study transient