Chemical structure metagenomics of microbial natural products: surveying nonribosomal peptides and beyond

• Thomas Ma and
• John Chu

Beilstein J. Org. Chem. 2024, 20, 3050–3060, doi:10.3762/bjoc.20.253

• of an NRP despite the fact that this feature is known to be important for bioactivity [79][80]. Typically, the C-terminus of the NRP intermediate is covalently linked via a thioester bond to the phosphopantetheine prosthetic arm of the peptide carrier protein (also known as the thiolation (T) domain

A review of recent advances in electrochemical and photoelectrochemical late-stage functionalization classified by anodic oxidation, cathodic reduction, and paired electrolysis

• Nian Li,
• Ruzal Sitdikov,
• Ajit Prabhakar Kale,
• Joost Steverlynck,
• Bo Li and
• Magnus Rueping

Beilstein J. Org. Chem. 2024, 20, 2500–2566, doi:10.3762/bjoc.20.214

• method for the regioselective thiolation of aromatic C–H bonds by activating the thiol rather than the arene [19]. For their developed reaction, Pt electrodes were used in an undivided cell with a mixture of HFIP/DCE 3:1 at room temperature under argon. Late-stage functionalization was demonstrated for

• leads to an intermediate product, which is then deprotonated, generating the thiol radical. This allowed for the preparation of the para-thiolation product (Scheme 11). Sulfonamides are an important class of bioactive molecules. In 2021, the Waldvogel group disclosed the first C(sp2)–H functionalization

Methyltransferases from RiPP pathways: shaping the landscape of natural product chemistry

• Maria-Paula Schröder,
• Isabel P.-M. Pfeiffer and
• Silja Mordhorst

Beilstein J. Org. Chem. 2024, 20, 1652–1670, doi:10.3762/bjoc.20.147

• the specialised metabolism of bacteria and fungi. Each NRPS module is minimally composed of a condensation (C) domain, an adenylation (A) domain, and a peptidyl carrier protein (PCP or thiolation/T domain), and one module typically incorporates one amino acid into the final natural product. In

Chemoenzymatic synthesis of macrocyclic peptides and polyketides via thioesterase-catalyzed macrocyclization

• Senze Qiao,
• Zhongyu Cheng and
• Fuzhuo Li

Beilstein J. Org. Chem. 2024, 20, 721–733, doi:10.3762/bjoc.20.66

• essential domains, namely adenylation (A), condensation (C), and peptidyl carrier protein (PCP). Each type I PKS module consists of three core domains containing acyltransferase (AT), ketosynthase (KS), and acyl carrier protein (ACP). PCP and ACP are collectively called thiolation domain (T). The sequence

Discovery of unguisin J, a new cyclic peptide from Aspergillus heteromorphus CBS 117.55, and phylogeny-based bioinformatic analysis of UngA NRPS domains

• Sharmila Neupane,
• Marcelo Rodrigues de Amorim and
• Elizabeth Skellam

Beilstein J. Org. Chem. 2024, 20, 321–330, doi:10.3762/bjoc.20.32

• of several catalytic domains organized into modules. Typically, a module possesses an adenylation (A) domain for selecting and activating amino- or keto acids, a thiolation (T) domain for shuttling intermediates between catalytic domains, and a condensation (C) domain that catalyzes amide or ester

N-Sulfenylsuccinimide/phthalimide: an alternative sulfenylating reagent in organic transformations

• Fatemeh Doraghi,
• Seyedeh Pegah Aledavoud,
• Mehdi Ghanbarlou,
• Bagher Larijani and
• Mohammad Mahdavi

Beilstein J. Org. Chem. 2023, 19, 1471–1502, doi:10.3762/bjoc.19.106

• intermediate III. Reductive elimination of Pd from III gave product 5 and species IV. Finaly, Pd(II) species were reproduced by ligand exchange to restart the next cycle (Scheme 4). In 2014, Fu and co-workers described a facile method for the C–H thiolation of phenols 7 with 1-(substituted phenylthio

• reactivity than electron-withdrawing groups, and the thiolation occurred mainly at the para position to the hydroxy group in phenols. In 2016, the azidoarylthiation of various alkenes 9 by trimethylsilyl azide (10) and N-(organothio)succinimide 1 to the corresponding products containing ortho-sited azide and

• this work. In 2018, Anbarasan and Chaitanya developed an efficient approach for the C–H bond functionalization of aryl compounds containing a directing group using N-(thioaryl)phthalimides 14 in the presence of a palladium catalyst (Scheme 15) [53]. The thiolation occurred in the presence of Pd(OAc)2

Application of N-heterocyclic carbene–Cu(I) complexes as catalysts in organic synthesis: a review

• Nosheen Beig,
• Varsha Goyal and
• Raj K. Bansal

Beilstein J. Org. Chem. 2023, 19, 1408–1442, doi:10.3762/bjoc.19.102

• carboxylation, C(sp2)–H alkenylation and allylation, C(sp2)–H arylation, C(sp2)–H amidation, and C(sp2)–H thiolation. Preceding the section of applications, a brief description of the structure of NHCs, nature of NHC–metal bond, and methods of preparation of NHC–Cu complexes is provided. Keywords: conjugate

• amidating reagent leading to the isolation of copper–arylcarbamato species and the desired product. The developed amidation protocol works highly efficiently and selectively over a broad range of substrates including polyfluorobenzenes, azoles, and quinoline N-oxides (Scheme 74). 2.10 C(sp2)–H thiolation

• Fukuzawa and co-workers [97] accomplished the oxidative thiolation of benzothiazoles and benzoxazoles with aryl and alkyl thiols catalyzed by NHC–copper(I) complexes to give 2-(arylthio)- and 2-(alkylthio)benzoxazoles/-benzothiazoles in moderate to good yields. Several catalysts

Strategies in the synthesis of dibenzo[b,f]heteropines

• David I. H. Maier,
• Barend C. B. Bezuidenhoudt and
• Charlene Marais

Beilstein J. Org. Chem. 2023, 19, 700–718, doi:10.3762/bjoc.19.51

• precursor 102 and the complementary aldehyde 103. 3.4 Catellani-type reaction The Catellani reaction involves palladium-norbornene cooperative catalysis to functionalise the ortho- and ipso-positions of aryl halides by alkylation, arylation, amination, acylation, thiolation, etc. [63]. Della Ca' et al. [64

A new oxidatively stable ligand for the chiral functionalization of amino acids in Ni(II)–Schiff base complexes

• Alena V. Dmitrieva,
• Oleg A. Levitskiy,
• Yuri K. Grishin and
• Tatiana V. Magdesieva

Beilstein J. Org. Chem. 2023, 19, 566–574, doi:10.3762/bjoc.19.41

• (established via the α-protonation/deprotonation in the intermediate α-carbanion in the amino acid moiety) and concomitant epimerization of the final product [41]. The results of the thiolation of complex (ΔAlaNi)L7 are given in Table 1. The corresponding ʟ-cysteine derivatives (RCysNi)L7 were isolated in high

• including the thiolation discussed above). Insertion of the t-Bu group also makes the (GlyNi)L7 complex more soluble in diethyl ether as compared to the parent (GlyNi)L1 complex (21.3 mg/1 mL vs <1 mg/1 mL in Et2O; see Figure 3). This is beneficial for electrosynthesis, simplifying the separation of the

• stereoselectivity observed in the thiolation of (ΔAlaNi)L7 complexes with RSH; and comparison with the data for (ΔAlaNi)L1 reported previously [41] given in parentheses.a The calculated (PBE-D4 /def2-SVP) energy differences between the ᴅ- and ʟ-(AlaNi). The solubility (mg/1 mL of CH3CN) of the complexes derived

Redox-active molecules as organocatalysts for selective oxidative transformations – an unperceived organocatalysis field

• Elena R. Lopat’eva,
• Igor B. Krylov,
• Dmitry A. Lapshin and
• Alexander O. Terent’ev

Beilstein J. Org. Chem. 2022, 18, 1672–1695, doi:10.3762/bjoc.18.179

• reoxidized to the disulfide by (NH4)2S2O8. The disulfide (SPyf)2 is also consumed in the thiolation of C-centered radicals affording the SPyf radical and target sulfides, which are in turn useful C-centered radical precursors for photoredox-catalyzed reactions [123]. The high efficiency of the thiolation

Iron-catalyzed domino coupling reactions of π-systems

• Austin Pounder and
• William Tam

Beilstein J. Org. Chem. 2021, 17, 2848–2893, doi:10.3762/bjoc.17.196

On the application of 3d metals for C–H activation toward bioactive compounds: The key step for the synthesis of silver bullets

• Renato L. Carvalho,
• Amanda S. de Miranda,
• Mateus P. Nunes,
• Roberto S. Gomes,
• Guilherme A. M. Jardim and
• Eufrânio N. da Silva Júnior

Beilstein J. Org. Chem. 2021, 17, 1849–1938, doi:10.3762/bjoc.17.126

Metal-free visible-light-enabled vicinal trifluoromethyl dithiolation of unactivated alkenes

• Xiaojuan Li,
• Qiang Zhang,
• Weigang Zhang,
• Jinzhu Ma,
• Yi Wang and
• Yi Pan

Beilstein J. Org. Chem. 2021, 17, 551–557, doi:10.3762/bjoc.17.49

• successfully studied. However, the disproportionate dithiolation of alkenes is unknown. Herein, a transition-metal-free protocol is presented for the vicinal trifluoromethylthio–thiolation of unactivated alkenes via a radical process under mild conditions with a broad substrate scope and excellent tolerance

• difunctionalization of unactivated alkenes for the construction of partially trifluoromethylated dithioethers with a broad substrate scope and a good chemical tolerance (Scheme 1c). Results and Discussion We evaluated the reaction conditions for this trifluoromethylthio–thiolation and found out that under irradiation

• substrate scope of the disulfides (Scheme 2). Using borate-substituted olefins, the intermolecular trifluoromethylthio–thiolation induced by the sequential radical difunctionalization proceeded smoothly in a chemoselective fashion. Both, with electron-withdrawing and electron-donating groups substituted

Silver-catalyzed synthesis of β-fluorovinylphosphonates by phosphonofluorination of aromatic alkynes

• Yajing Zhang,
• Qingshan Tian,
• Guozhu Zhang and
• Dayong Zhang

Beilstein J. Org. Chem. 2020, 16, 3086–3092, doi:10.3762/bjoc.16.258

• . Among the strategies for constructing diverse alkenes containing two-heteroatom bonds, such as disulfonylation [14][15][16], heterohalogenation [17][18][19][20], bis(trifluoromethyl)thiolation [21], and phosphorylation [22], the direct heterodifunctionalization of alkynes using three-component reactions

Recent synthesis of thietanes

• Jiaxi Xu

Beilstein J. Org. Chem. 2020, 16, 1357–1410, doi:10.3762/bjoc.16.116

Fabclavine diversity in Xenorhabdus bacteria

• Sebastian L. Wenski,
• Harun Cimen,
• Natalie Berghaus,
• Sebastian W. Fuchs,
• Selcuk Hazir and
• Helge B. Bode

Beilstein J. Org. Chem. 2020, 16, 956–965, doi:10.3762/bjoc.16.84

• biosynthesis start at FclJ (the Figures were adapted and modified from [20] and [22]. KS: ketosynthase, AT: acyltransferase, T: thiolation domain, KR: ketoreductase, CLF: chain length factor domain, DH: dehydratase, Ox: 2-nitropropane dioxygenase (enoyl reductase), AMT: aminotransferase, TR: thioester

• . stockiae, g: KK7.4, h: KJ12.1, i: X. bovienii, j: P. temperata. KS: ketosynthase, AT: acyltransferase, T: thiolation domain, KR: ketoreductase, CLF: chain length factor domain, DH: dehydratase, Ox: 2-nitropropane dioxygenase (enoyl reductase), AMT: aminotransferase, TR: thioester reductase, Nit: nitrilase

Recent applications of porphyrins as photocatalysts in organic synthesis: batch and continuous flow approaches

• Rodrigo Costa e Silva,
• Luely Oliveira da Silva,
• Aloisio de Andrade Bartolomeu,
• Timothy John Brocksom and
• Kleber Thiago de Oliveira

Beilstein J. Org. Chem. 2020, 16, 917–955, doi:10.3762/bjoc.16.83

• % yields). Mixtures of regioisomers were obtained when a m-substituted N,N-dimethylaniline was used. The authors have proposed a reductive quenching pathway mechanism for this protocol (Scheme 8). The use of NiTPP as photoreductant was also exploited in the selenylation and thiolation reactions of anilines

• the aryldiazonium salt leads to the other aryl radical species (path b, Scheme 9). The thio- and selenoethers were obtained after solvolysis. Excellent yields (up to 94%) were reported for both selenylation and thiolation of anilines with electron-withdrawing and electron-donating groups in the ortho

• tetrahydroquinolines by reductive quenching. Selenylation and thiolation of anilines. NiTPP as photoredox catalyst in oxidative and reductive quenching, in comparison with other photocatalysts. C–O bond cleavage of 1-phenylethanol using a cobalt porphyrin (CoTMPP) under visible light. Hydration of terminal alkynes by

Recent developments in photoredox-catalyzed remote ortho and para C–H bond functionalizations

• Rafia Siddiqui and
• Rashid Ali

Beilstein J. Org. Chem. 2020, 16, 248–280, doi:10.3762/bjoc.16.26

• an intermediate radical anion 40 via SET. Then, the intermediate 40 yields the acylated radical 41 by fragmentation, which, upon intramolecular addition, followed by one-electron oxidation and deprotonation, gives the desired product 37. C–H thiolation Synthesis of benzothiazoles via aerobic C–H

• thiolation: In 2011, Cheng et al. reported a mild and efficient synthetic process for the construction of benzothiazoles, which have many applications in biology and pharmacy, via C–H functionalization without the direct involvement of a metal, using visible light-mediated photoredox catalysis [100]. They

• benzothiazoles via oxidant-free C–H thiolation: On the other hand, a novel dual photoredox catalytic system of photoredox catalyst 11 and a cobalt catalyst was designed by Wu and Lei for the construction of benzothiazoles [101]. Because of the properties of the photoredox catalyst 11, the reaction was carried

Recent advances on the transition-metal-catalyzed synthesis of imidazopyridines: an updated coverage

• Gagandeep Kour Reen,
• Ashok Kumar and
• Pratibha Sharma

Beilstein J. Org. Chem. 2019, 15, 1612–1704, doi:10.3762/bjoc.15.165

Metal-free C–H mercaptalization of benzothiazoles and benzoxazoles using 1,3-propanedithiol as thiol source

• Yan Xiao,
• Bing Jing,
• Xiaoxia Liu,
• Hongyu Xue and
• Yajun Liu

Beilstein J. Org. Chem. 2019, 15, 279–284, doi:10.3762/bjoc.15.24

• -catalyzed C–H thiolation of benzothiazole or benzoxazole with a disulfide and a thiol provides easy access to the corresponding sulfides [26][27][28][29][30][31][32][33][34]. However, the examples using C–H functionalization for preparing 2-mercaptobenzoxazoles or 2-mercaptobenzothiazoles are still rare. In

Synthesis of aryl sulfides via radical–radical cross coupling of electron-rich arenes using visible light photoredox catalysis

• Amrita Das,
• Mitasree Maity,
• Simon Malcherek,
• Burkhard König and
• Julia Rehbein

Beilstein J. Org. Chem. 2018, 14, 2520–2528, doi:10.3762/bjoc.14.228

• . Keywords: arenes; oxidation; photocatalysis; thiolation; visible light; Introduction The generation of carbon–sulfur bonds is an important task in organic synthesis, because of their abundance in target structures, such as natural products and drugs [1][2][3]. They are found in organic semiconductors

• , electron poor arenes are required. In this article, we report the development of a mild and efficient oxidative photocatalytic method of thiolation of electron-rich di- and trimethoxybenzene arenes with aryl disulfides and (NH4)2S2O8 as terminal oxidant (Scheme 2). Results and Discussion 1,2,4

Photocatalytic formation of carbon–sulfur bonds

• Alexander Wimmer and
• Burkhard König

Beilstein J. Org. Chem. 2018, 14, 54–83, doi:10.3762/bjoc.14.4

• , trifluoromethyl groups and halides, but iodides led to polymer formation. Li and Wang developed a method for the α-C(sp3)–H thiolation of ethers, using Acridine Red as photosensitizer and tert-butyl hydroperoxide (TBHP) as oxidant (Scheme 38) [73]. They reported that photoexcited Acridine Red performs an energy

Solid-state mechanochemical ω-functionalization of poly(ethylene glycol)

• Michael Y. Malca,
• Pierre-Olivier Ferko,
• Tomislav Friščić and
• Audrey Moores

Beilstein J. Org. Chem. 2017, 13, 1963–1968, doi:10.3762/bjoc.13.191

• PEG with tosyl, bromide, thiol, carboxylic acid or amine functionalities in good to quantitative yields and with no polymer chain oligomerization, proving the versatility of the method. Keywords: amination; bromination; carboxylation; mechanochemistry; poly(ethylene glycol); solid state; thiolation

• bromoacyl halides, which introduces unnecessary ester groups instead of direct bromine substitution onto the polymer chain [34][36][37]. Next, we explored the thiolation by milling the mPEG–OTs with NaHS·xH2O for 90 min (Table 2, entries 3 and 4) as reagent, which afforded 1H NMR conversions of 55% and 78

Transition-metal-catalyzed synthesis of phenols and aryl thiols

• Yajun Liu,
• Shasha Liu and
• Yan Xiao

Beilstein J. Org. Chem. 2017, 13, 589–611, doi:10.3762/bjoc.13.58

• succeeded in a Nickel catalyzed thiolation of aryl iodides with thiourea in DMF. Aryl iodides firstly reacted with thiourea in the presence of bis(triethylphosphine)nickel(II) chloride and sodium cyanoborohydride as catalyst precusor, and afforded aryl isothiuronium iodide, which could be further converted

• with TBAF. In 2011, the Fu and Guo group reported that Pd(OAc)2/X-Phos (L16) and Pd2(dba)3/X-Phos-catalyzed thiolation of aryl bromide and chloride using sodium thiosulfate as thiol source [101]. The coupling reaction proceeded in water in the presence of Cs2CO3, and first gave aryl thiosulfate, which

• catalyzed thiolation of aryl halides have been extensively studied. In 2006, the Sawada group reported that aryl iodides could couple with thiobenzoic acid in the presence of a copper catalyst and 1,10-phenanthroline (L17), affording S-aryl thiocarboxylates in excellent yields [102]. The coupled product was

Development of a continuous process for α-thio-β-chloroacrylamide synthesis with enhanced control of a cascade transformation

• Olga C. Dennehy,
• Valérie M. Y. Cacheux,
• Benjamin J. Deadman,
• Denis Lynch,
• Stuart G. Collins,
• Humphrey A. Moynihan and
• Anita R. Maguire

Beilstein J. Org. Chem. 2016, 12, 2511–2522, doi:10.3762/bjoc.12.246

• , the possibility of telescoping the amide formation and thiolation steps was considered. Attempts were made to use triethylamine as the base in a continuous thiolation reaction, however, the reaction was found to progress slowly and a maximum conversion of 39% was observed by 1H NMR spectroscopy

• envisaged that flowing the reaction through a heated section of tubing would be analogous to the batch ‘hot plunge’ method but with the capacity for faster heating of the reaction. Given the superior performance of α-thioamide 2 synthesis in batch, the potential telescoping of the thiolation process with