Synthesis and physical properties of tunable aryl alkyl ionic liquids based on 1-aryl-4,5-dimethylimidazolium cations

• Stefan Fritsch and
• Thomas Strassner

Beilstein J. Org. Chem. 2024, 20, 1278–1285, doi:10.3762/bjoc.20.110

• Stefan Fritsch Thomas Strassner Physikalische Organische Chemie, Technische Universität Dresden, 01062 Dresden, Germany 10.3762/bjoc.20.110 Abstract We present a new class of tunable aryl alkyl ionic liquids (TAAILs) based on 1-aryl-4,5-dimethylimidazolium cations with electron-withdrawing and

• weakly coordinating anions like bis(trifluoromethylsulfonyl)imide [NTf2]− [25]. In addition, dicationic salts or anions containing metal complexes have been described [26][27]. Due to the numerous combinations of different anions and cations, ILs can also be described as designer solvents [28]. We

• [PhImC4H9]+, the unsubstituted 4,5-dimethyl-1-phenyl cation of TAAIL 37 and the cations of TAAILs 40 (4-CH3) and 49 (4-CF3). The structures of the cations were optimized with Gaussian 16 [56], using the hybrid functional Becke3LYP [57][58][59][60] with the split valence triple-ζ basis set 6-311++G(d,p) [61

Stability trends in carbocation intermediates stemming from germacrene A and hedycaryol

• Naziha Tarannam,
• Prashant Kumar Gupta,
• Shani Zev and
• Dan Thomas Major

Beilstein J. Org. Chem. 2024, 20, 1189–1197, doi:10.3762/bjoc.20.101

• -covalent interactions plots. Despite the structural similarities between germacrene A and hedycaryol cations, they possess a somewhat different stability trend. These differences are attributed to C+···OH intramolecular interactions present in some hedycaryol cations, which are absent in the carbocations

• the germacrene cations, among the first set of compounds, i.e., 6-6 bicyclic molecules (Figure 2 and Figure S1 in Supporting Information File 1), A and C are most stable, D is less stable by 2.9 kcal/mol, while B is the least stable (8.3 kcal/mol). In the case of the 5-7 bicycles with a seven-membered

• for the difference in free energy, we analyzed the NCI plots for germacrene cations A–D. Despite being isomers, these carbocations possess quite different geometric arrangements. For instance, molecule A is more planar than the puckered B. It is clear from visual inspection of the NCI plots that B

Confirmation of the stereochemistry of spiroviolene

• Yao Kong,
• Yuanning Liu,
• Kaibiao Wang,
• Tao Wang,
• Chen Wang,
• Ben Ai,
• Hongli Jia,
• Guohui Pan,
• Min Yin and
• Zhengren Xu

Beilstein J. Org. Chem. 2024, 20, 852–858, doi:10.3762/bjoc.20.77

• either IM-9 or IM-11 cations. A direct dyotropic rearrangement, or two stepwise 1,2-alkyl migrations of IM-9, are possible pathways en route to cation IM-10. The presence of these intermediates IM-9, -10, -11 could be inferred by the identification of GJ1012B/D (5/6, Scheme 1D) [11], cattleyene (7) [19

Skeletal rearrangement of 6,8-dioxabicyclo[3.2.1]octan-4-ols promoted by thionyl chloride or Appel conditions

• Martyn Jevric,
• Julian Klepp,
• Johannes Puschnig,
• Oscar Lamb,
• Christopher J. Sumby and
• Ben W. Greatrex

Beilstein J. Org. Chem. 2024, 20, 823–829, doi:10.3762/bjoc.20.74

• ]octane ring-system via the chlorosulfite intermediate. Analogous allylic alcohols with endocyclic and exocyclic unsaturations underwent chlorination without rearrangement due to formation of allylic cations. The rearrangement was also demonstrated using Appel conditions, which gave similar results via

Advancements in hydrochlorination of alkenes

• Daniel S. Müller

Beilstein J. Org. Chem. 2024, 20, 787–814, doi:10.3762/bjoc.20.72

• the alkene in the first step, providing a carbocation that subsequently reacts with a chloride anion to yield the Markovnikov product. While this ionic mechanism is commonly illustrated in textbooks by showing “naked” cations as intermediates, several recent studies suggest a molecular concerted or

• , HCl gas was bubbled through neat alkene 1 for several hours, as depicted in Scheme 3A [35]. This example highlights an intriguing regioselectivity that might have been challenging to predict through a simple analysis of the stability of the corresponding cations. Alternatively, the HCl gas was bubbled

• a mixture of E- and Z-octene (67) (Scheme 10). They also mentioned in a footnote that 2-chlorooctane (41) was contaminated by "some 3-chlorooctane” (68). The formation of regioisomers through hydride or alkyl shifts is a common occurrence in hydrochlorination reactions involving secondary cations

Synthesis of photo- and ionochromic N-acylated 2-(aminomethylene)benzo[b]thiophene-3(2Н)-ones with a terminal phenanthroline group

• Vladimir P. Rybalkin,
• Sofiya Yu. Zmeeva,
• Lidiya L. Popova,
• Irina V. Dubonosova,
• Olga Yu. Karlutova,
• Oleg P. Demidov,
• Alexander D. Dubonosov and
• Vladimir A. Bren

Beilstein J. Org. Chem. 2024, 20, 552–560, doi:10.3762/bjoc.20.47

• known ability to coordinate with metal cations [22][23]. Dual-mode naked-eye molecular switches controlled by both light and changes in the ionic composition of the medium can be used as elements of electronic devices, for optical recording of information as well as in photopharmacology, light-gated

• effect: a visually distinguishable color change of the solutions from yellow to dark orange (Figure 5). Other cations did not demonstrate a measurable effect (Figure 6). Complexes 2a–c with Fe2+ in acetonitrile and DMSO were nonfluorescent. According to spectrophotometric titration data and the isomolar

• ) were used. 1 mL of a 2a–c solution and 1 mL of a perchlorate solution were mixed directly in the cuvette and thoroughly stirred. Hence, the working concentration of the compounds 2–c and the cations was 5.0 × 10–5 mol⋅L−1 and 1.0 × 10−5 mol⋅L−1. HRMS analysis was performed on a Bruker UHR-TOF Maxis

Switchable molecular tweezers: design and applications

• Pablo Msellem,
• Maksym Dekthiarenko,
• Nihal Hadj Seyd and
• Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

• terpyridine-bearing platinum–salphen known for their luminescence properties [41]. The closing process of the tweezers 12 was studied by NMR or UV–vis titrations with Zn2+ and other cations such as Pb2+, Fe2+, Cu2+, Eu3+, and Yb3+ indicating in all cases a 1:1 association model. The system can then be

• allosteric binding to alkali K+ cations associated with a shift in the emission maxima. This system offers innovative exploitation of switchable molecular tweezers for allosteric ion recognition with a double selection (metallic ion and counter anion) of the closing stimulus. Closed-by-default tweezers can

•  13) [32]. Such moiety is able to complex two copper(I) cations, both sides of the system acting as independent bipyridine units, giving the possibility of sequential opening of the tweezers one arm at a time. Indeed, when only one copper(I) cation is complexed, tweezers 22a and 22b adopt an “S

Enhanced host–guest interaction between [10]cycloparaphenylene ([10]CPP) and [5]CPP by cationic charges

• Eiichi Kayahara,
• Yoshiyuki Mizuhata and
• Shigeru Yamago

Beilstein J. Org. Chem. 2024, 20, 436–444, doi:10.3762/bjoc.20.38

• complex was also formed by mixing a 1:1 mixture of radical cations of [5]- and [10]CPP, [5]CPP•+ (SbCl6−) and [10]CPP•+ (SbCl6−), respectively (Figure 1c, path C). The observed results can be explained by two reasons; one is the oxidation potentials of [10]- and [5]CPPs. In sharp contrast to linear π

Green and sustainable approaches for the Friedel–Crafts reaction between aldehydes and indoles

• Periklis X. Kolagkis,
• Eirini M. Galathri and
• Christoforos G. Kokotos

Beilstein J. Org. Chem. 2024, 20, 379–426, doi:10.3762/bjoc.20.36

Substitution reactions in the acenaphthene analog of quino[7,8-h]quinoline and an unusual synthesis of the corresponding acenaphthylenes by tele-elimination

• Ekaterina V. Kolupaeva,
• Narek A. Dzhangiryan,
• Alexander F. Pozharskii,
• Oleg P. Demidov and
• Valery A. Ozeryanskii

Beilstein J. Org. Chem. 2024, 20, 243–253, doi:10.3762/bjoc.20.24

• (Supporting Information File 1, Figure S13). This is a rather low value for chelate-type cations, but at the same time, it is quite logical, as molecule 14 contains a short CH=CH bridge, which increases the internitrogen distance and stretches (that is, weakens) the intramolecular hydrogen bond. For

• increase in the series 3 → 5 → 8 (“clothespin” effect) [30]. The crystal packing patterns in salts 5·HBF4 and 8·HBF4 are quite similar. The main factor here continues to be the tendency of almost flat disk-shaped heterocyclic cations to π-stacking, leading to the formation of dense columns with anions in

• between (Supporting Information File 1, Figure S22). Flat dipyridoacenaphthylene cations 8H+ give a denser packing, which, with an interplanar distance of only 3.328 Å, is the closest among all the studied compounds. Conclusion Using single crystal XRD technique, dipyridoacenaphthene tetrafluoroborate

Photochromic derivatives of indigo: historical overview of development, challenges and applications

• Gökhan Kaplan,
• Zeynel Seferoğlu and
• Daria V. Berdnikova

Beilstein J. Org. Chem. 2024, 20, 228–242, doi:10.3762/bjoc.20.23

• (λirr = 660 nm). The excited state dynamics of 18c was later studied in detail by Nagasawa and co-workers using femtosecond time-resolved transient absorption spectroscopy [44]. In 2022, Qiao and co-workers attempted to extend the thermal relaxation half-life of compound 18c by addition of cations such

• + cations (500 equiv). At the same time, addition of TBA+ cations showed just a minimal impact on the stability of the Z-form comparable with the effect of counter anions and solvent polarity. In 2021, Tsubaki and co-workers synthesized bridged N,N′-dialkyl-substituted indigos 13 and studied their thermal

• -aryl-N'-alkylindigo photoswitches 22b, 23c and 23d upon addition of Li+ cations. These studies revealed that the presence of the electron-withdrawing groups on the aryl moiety decreased the charge density on the carbonyl groups and weakened the interaction of the Z-isomers with Li+ that accounted for

Photoinduced in situ generation of DNA-targeting ligands: DNA-binding and DNA-photodamaging properties of benzo[c]quinolizinium ions

• Julika Schlosser,
• Olga Fedorova,
• Yuri Fedorov and
• Heiko Ihmels

Beilstein J. Org. Chem. 2024, 20, 101–117, doi:10.3762/bjoc.20.11

• benzo[c]quinolizinium derivatives is more efficient under resembling conditions. Thus, the isomeric benzo[b]quinolizinium cations showed DNA damage to a lower extent after irradiation for 10 min with 15–20% and 20–25% DNA cleavage under anaerobic and aerobic conditions, respectively [35]. Likewise

Electron-beam-promoted fullerene dimerization in nanotubes: insights from DFT computations

• Laura Abella,
• Gerard Novell-Leruth,
• Josep M. Ricart,
• Josep M. Poblet and
• Antonio Rodríguez-Fortea

Beilstein J. Org. Chem. 2024, 20, 92–100, doi:10.3762/bjoc.20.10

• found for the radical cation products, especially in the gas phase (second column in Table 1). The reaction energies are, however, notably more negative for the radical cation products. Besides, radical cations 1-Cs•+ and 1-D2h•+ show comparable energies. Finally, for the nanotubular-shaped C120-NT-D5d

1-Butyl-3-methylimidazolium tetrafluoroborate as suitable solvent for BF₃: the case of alkyne hydration. Chemistry vs electrochemistry

• Marta David,
• Elisa Galli,
• Richard C. D. Brown,
• Marta Feroci,
• Fabrizio Vetica and
• Martina Bortolami

Beilstein J. Org. Chem. 2023, 19, 1966–1981, doi:10.3762/bjoc.19.147

• with alternative solvents could represent an important innovation for alkyne hydration. In particular, ionic liquids (ILs) could represent a valid alternative to conventional organic solvents. ILs are generally liquid salts at or near room temperature, formed by large unsymmetrical organic cations and

• the hydration of alkynes, named poly(ionic liquid)s (PILs), using trifluoroethanol as solvent [88][89]. One of the most studied classes of ILs in organic chemistry are 1,3-disubstitued imidazolium cations, which are cheap, liquid over a wide range of temperatures, and possess good solvating properties

• experiments were carried out under the conditions reported in entry 9 of Table 1, in order to observe possible variations in the yield of compound 2a. ILs with different anions or cations (compared to BMIm-BF4) were investigated to probe potential interactions with the reagents, the intermediates or the

Beyond n-dopants for organic semiconductors: use of bibenzo[d]imidazoles in UV-promoted dehalogenation reactions of organic halides

• Kan Tang,
• Megan R. Brown,
• Chad Risko,
• Melissa K. Gish,
• Garry Rumbles,
• Phuc H. Pham,
• Oana R. Luca,
• Stephen Barlow and
• Seth R. Marder

Beilstein J. Org. Chem. 2023, 19, 1912–1922, doi:10.3762/bjoc.19.142

• the electrochemical depolymerization of poly(ethylene terephthalate) [25]. These dimers (D2 = (Y-DMBI)2) undergo reactions with organic semiconductors A to afford two monomeric Y-DMBI+ (D+) cations and two reduced semiconductors, A•−. The effective redox potentials, E(D+/0.5D2), are estimated to be ca

• and photocatalysts used, and (c) schematic for the present approach, along with structures of 1,1',3,3'-tetramethyl-2,2',3,3'-tetrahydro-2,2'-bibenzo[d]imidazoles, (Y-DMBI)2, and the corresponding monomer cations, specifically the first reported in the literature and those used in this work. (a) A

Unprecedented synthesis of a 14-membered hexaazamacrocycle

• Anastasia A. Fesenko and
• Anatoly D. Shutalev

Beilstein J. Org. Chem. 2023, 19, 1728–1740, doi:10.3762/bjoc.19.126

• [1][2][3][4][5][6]. The great interest in PAMs is primarily due to their ability to bind various cations, anions, and neutral molecules [7][8][9][10][11][12][13][14]. In addition, some representatives of PAMs were found in various natural products and play an important role in living systems (e.g

• prepared compounds were able to chelate various metal cations through the N1, N4, N8, and N11 atoms [37][38]. In continuation of our research on 1,2,4,8,9,11-hexaazamacrocycles, which are under-explored representatives of the PAMs family, we were particularly interested in the synthesis of more unsaturated

• ]. Moreover, the size of internal cavity formed by the nitrogen atoms N5, N8, N13, and N16 (≈2.6 Å × 2.8 Å according to the DFT calculations) enables to chelate various metal cations. Herein, we attempted to prepare compounds 11 and 12 by annulation of two 1,2,4-triazole rings onto the macrocyclic core of 5

Benzoimidazolium-derived dimeric and hydride n-dopants for organic electron-transport materials: impact of substitution on structures, electrochemistry, and reactivity

• Swagat K. Mohapatra,
• Khaled Al Kurdi,
• Samik Jhulki,
• Georgii Bogdanov,
• John Bacsa,
• Maxwell Conte,
• Tatiana V. Timofeeva,
• Seth R. Marder and
• Stephen Barlow

Beilstein J. Org. Chem. 2023, 19, 1651–1663, doi:10.3762/bjoc.19.121

• cations, while 4,7-dimethoxy substitution leads to more reducing E(1+/1•) values, as well as cathodic shifts in E(12•+/12) and E(1H•+/1H) values. Both the use of 3,4-dimethoxy and 2-aryl substituents accelerates the reaction of the 1H species with PC61BM. Because 2-aryl groups stabilize radicals, 1b2 and

• strong dopants, reacting with semiconductors more rapidly and predictably than hydride donors such as the corresponding 1H species [8], cleanly only to give SC•– and the corresponding monomeric cations. However, 12 dopants offer the possibility of more planar dopant ions than the organometallic dimers

• donors (1gH, 1hH, 1iH). We also report crystal structures of several of these compounds and of several salts of the corresponding 1+ cations, and compare the electrochemistry and reactivity of these species. Results and Discussion Synthesis Although an unsymmetrical 12-like molecule, 2-diethoxyphosphoryl

Tying a knot between crown ethers and porphyrins

• Maksym Matviyishyn and
• Bartosz Szyszko

Beilstein J. Org. Chem. 2023, 19, 1630–1650, doi:10.3762/bjoc.19.120

• cations), forming coordination compounds wherein the central ion acquires a square planar [14], square pyramidal [15], or an octahedral coordination environment [16]. On the opposite side, crown ethers are cyclic molecules composed of carbon and oxygen atoms forming the macrocycle. Depending on the size

• /electrostatic interactions [18][19][20]. Replacing oxygen atoms with other elements, such as nitrogen, sulfur, etc., alters the crown ethers' affinity toward cations, extending their role as macrocyclic ligands to transition metals [21]. One can say that in many aspects, porphyrins and crown ethers are

• date back to 1982 when Krishnan and Thanabal reported synthesising a new host molecule with multiple cavities capable of encompassing several guest molecules/ions [39]. The molecule demonstrated an exciting feature of binding Na+, Mg2+, Ca2+, K+, NH4+, and Ba2+ cations. The incorporation of cations

Synthesis and biological evaluation of Argemone mexicana-inspired antimicrobials

• Jessica Villegas,
• Bryce C. Ball,
• Katelyn M. Shouse,
• Caleb W. VanArragon,
• Ashley N. Wasserman,
• Hannah E. Bhakta,
• Allen G. Oliver,
• Danielle A. Orozco-Nunnelly and
• Jeffrey M. Pruet

Beilstein J. Org. Chem. 2023, 19, 1511–1524, doi:10.3762/bjoc.19.108

• variants was largely inspired by a recent report that prepared flexible secondary ammonium cations with structural similarity to chelerythrine, wherein the authors did see notable biological potential in these flexible variants [32]. The influence of a fixed charge was also assessed, as protonated compound

Cyclization of 1-aryl-4,4,4-trichlorobut-2-en-1-ones into 3-trichloromethylindan-1-ones in triflic acid

• Vladislav A. Sokolov,
• Andrei A. Golushko,
• Irina A. Boyarskaya and
• Aleksander V. Vasilyev

Beilstein J. Org. Chem. 2023, 19, 1460–1470, doi:10.3762/bjoc.19.105

• , the O-protonated forms ArC(=OH+)CH=CHCCl3, which are then cyclized into the target CCl3-indanones. These cations have been studied experimentally by means of NMR spectroscopy in TfOH and theoretically by DFT calculations. Under the same superacidic conditions in TfOH, CCl3-hydroxy ketones (1-aryl

• atoms H2 and H3 in cations Aa,c,d and their neutral precursors 1a,c,d were 0.59–0.86 and 0.28–0.31 ppm (Table 2). These downfield shifts of the signals point to an inductively induced positive charge on these hydrogens due to the protonation of the oxygens of the carbonyl and hydroxy groups. According

• to the 13C NMR spectra, the largest downfield shift was observed for the carbonyl carbon С1, with ∆δ = 17.7–21.1 ppm, showing a substantial degree of protonation of the carbonyl group in TfOH. The tendencies are the same for the protonation of enones 2a,c,d,m leading to cations Ba,c,d,m (Table 2

Synthesis of ether lipids: natural compounds and analogues

• Marco Antônio G. B. Gomes,
• Alicia Bauduin,
• Chloé Le Roux,
• Romain Fouinneteau,
• Wilfried Berthe,
• Mathieu Berchel,
• Hélène Couthon and
• Paul-Alain Jaffrès

Beilstein J. Org. Chem. 2023, 19, 1299–1369, doi:10.3762/bjoc.19.96

Photoredox catalysis harvesting multiple photon or electrochemical energies

• Mattia Lepori,
• Simon Schmid and
• Joshua P. Barham

Beilstein J. Org. Chem. 2023, 19, 1055–1145, doi:10.3762/bjoc.19.81

Asymmetric tandem conjugate addition and reaction with carbocations on acylimidazole Michael acceptors

• Brigita Mudráková,
• Renata Marcia de Figueiredo,
• Jean-Marc Campagne and
• Radovan Šebesta

Beilstein J. Org. Chem. 2023, 19, 881–888, doi:10.3762/bjoc.19.65

• , imines, other Michael acceptors, or alkyl halides. Our group is developing trapping of metal enolates with stabilized carbocations and could show that magnesium enolates generated from enones [22], unsaturated amides [23], or heterocycles reacted with tropylium, dithiolylium or flavylium cations [24

A fluorescent probe for detection of Hg²⁺ ions constructed by tetramethyl cucurbit[6]uril and 1,2-bis(4-pyridyl)ethene

• Xiaoqian Chen,
• Naqin Yang,
• Yue Ma,
• Xinan Yang and
• Peihua Ma

Beilstein J. Org. Chem. 2023, 19, 864–872, doi:10.3762/bjoc.19.63

• other metal cations) in aqueous solution was investigated using fluorescence spectroscopy. It was found that the G molecule had no specific fluorescence response to the above metal cations (Figure 5a). Interestingly, the addition of the Hg2+ ion to the G@TMeQ[6] system caused a strong fluorescence

• ability of the probe to detect Hg2+ ions The metal cation interference experiment was used to investigate whether the G@TMeQ[6] fluorescent probe can selectively detect Hg2+ ion in the presence of other metal cations (Figure 6). The fluorescence intensity of the system was determined by adding other metal

• cations to the G@TMeQ[6]–Hg2+ system. The results showed that in the presence of other metal ions, the G@TMeQ[6] probe still showed specific recognition of Hg2+ ions. Fluorescence spectroscopy analysis of the interaction between the probe and Hg2+ ions The fluorescence titration curve of G@TMeQ[6] and Hg2

Synthesis, structure, and properties of switchable cross-conjugated 1,4-diaryl-1,3-butadiynes based on 1,8-bis(dimethylamino)naphthalene

• Semyon V. Tsybulin,
• Ekaterina A. Filatova,
• Alexander F. Pozharskii,
• Valery A. Ozeryanskii and
• Anna V. Gulevskaya

Beilstein J. Org. Chem. 2023, 19, 674–686, doi:10.3762/bjoc.19.49

• -trifluoromethylphenyl rings. By the way, the qr parameters calculated for two independent molecules of 11c were 0.008 and 0.009, which is slightly less than in the case of compounds 5. As for the crystal packing of 11c, BF4− anions of two types (“red” and “yellow”) interact with cations in different ways. The “red