Advances in mercury(II)-salt-mediated cyclization reactions of unsaturated bonds

• Sumana Mandal,
• Raju D. Chaudhari and
• Goutam Biswas

Beilstein J. Org. Chem. 2021, 17, 2348–2376, doi:10.3762/bjoc.17.153

• in a diastereomeric pair of cyclized products 69 and 71, respectively. It was observed that the cis-isomer was predominant in the case of the five-membered ring while the trans-isomer was predominant in the case of the six-membered ring formation (Scheme 24) [72]. Cyclization involving alkynes (-C≡C

Nomimicins B–D, new tetronate-class polyketides from a marine-derived actinomycete of the genus Actinomadura

• Zhiwei Zhang,
• Tao Zhou,
• Taehui Yang,
• Keisuke Fukaya,
• Enjuro Harunari,
• Shun Saito,
• Katsuhisa Yamada,
• Chiaki Imada,
• Daisuke Urabe and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2021, 17, 2194–2202, doi:10.3762/bjoc.17.141

• ring was fused with another six-membered ring to give a dehydrodecalin core by the correlations from a singlet methyl hydrogen atom H25 to C4, C5, and C13. A series of HMBC correlations from two methyl singlets H27 and H28 elucidated the carbon connectivity of C23–C18–C19–C20–C21 (Figure 2), which was

• ). Placement of the oxygenated carbon atom C8 between C7 and C9 and the attachment of the oxygenated methylene carbon atom C26 to C8 were deduced from the HMBC correlations from H7 and H9 to C8 and C26 and from H26 to C7, C8, and C9, thereby establishing a highly oxygenated cyclohexane ring. This six-membered

Methodologies for the synthesis of quaternary carbon centers via hydroalkylation of unactivated olefins: twenty years of advances

• Thiago S. Silva and
• Fernando Coelho

Beilstein J. Org. Chem. 2021, 17, 1565–1590, doi:10.3762/bjoc.17.112

• of this kind of reaction is the catalytic use of the hydride donor, in this case phenylsilane (PhSiH3), due to the regeneration of the active metal hydride species in the cycloisomerization mechanism pathway (Scheme 18). The lower cyclization constant for the six-membered ring formation, in

• good yields. Five- and six-membered rings were synthesized by this method, and the tetracyclic compounds 69i–l were obtained when isopregol halide derivatives were employed. No diastereoselectivity was observed in the five-membered cyclizations (Scheme 26A, 69e–g), whereas the six-membered ring 69h was

A straightforward conversion of 1,4-quinones into polycyclic pyrazoles via [3 + 2]-cycloaddition with fluorinated nitrile imines

• Greta Utecht-Jarzyńska,
• Karolina Nagła,
• Grzegorz Mlostoń,
• Heinz Heimgartner,
• Marcin Palusiak and
• Marcin Jasiński

Beilstein J. Org. Chem. 2021, 17, 1509–1517, doi:10.3762/bjoc.17.108

• , and diverse transformations are known to create new C–C bonds and/or to extend the (poly)cyclic system. In this context, cycloadditions are of special importance, and Diels–Alder reactions have successfully been explored in conversions aimed at the construction of a new, six-membered ring [5]. However

N-tert-Butanesulfinyl imines in the asymmetric synthesis of nitrogen-containing heterocycles

• Joseane A. Mendes,
• Paulo R. R. Costa,
• Miguel Yus,
• Francisco Foubelo and
• Camilla D. Buarque

Beilstein J. Org. Chem. 2021, 17, 1096–1140, doi:10.3762/bjoc.17.86

• were performed and they predicted correctly the observed experimental results considering a six-membered ring cyclic transition state. The addition took place to the Si-face of the imines with (RS)-configuration. Compounds 97 were also evaluated in a preliminary study in leukemia strains (Scheme 29

• number of classical methodologies have been used for their synthesis, in which the key step is the generation of the six-membered ring, including the aldol reaction, the reductive amination, Mannich reaction, ring closing metathesis, Diels–Alder reaction with imines as dienophiles, aza-Prins cyclization

Microwave-assisted multicomponent reactions in heterocyclic chemistry and mechanistic aspects

• Shivani Gulati,
• Stephy Elza John and
• Nagula Shankaraiah

Beilstein J. Org. Chem. 2021, 17, 819–865, doi:10.3762/bjoc.17.71

• rearrangement [102] in an analogous heterocyclic system. 8 Pyridines/fused pyridines 8.1 Pyridines Pyridines are six-membered ring systems consisting of five carbon atoms and one nitrogen atom. Highly substituted pyridines are known to show various pharmacological activities and are also found in various

A chromatography-free and aqueous waste-free process for thioamide preparation with Lawesson’s reagent

• Ke Wu,
• Yichen Ling,
• An Ding,
• Liqun Jin,
• Nan Sun,
• Baoxiang Hu,
• Zhenlu Shen and
• Xinquan Hu

Beilstein J. Org. Chem. 2021, 17, 805–812, doi:10.3762/bjoc.17.69

• effective in the decomposition of the inherent stoichiometric six-membered-ring byproduct from the Lawesson’s reagent to a highly polarized diethyl thiophosphonate. The treatment significantly simplified the following chromatography purification of the desired thioamide in a small scale preparation. As

• compounds [2][3][4][5]. Although LR is a powerful, mild and versatile thionation reagent, the workup procedures of reactions involving this reagent have received quite a few negative comments [6][7][8][9][10]. The reason for this is that an inherent six-membered ring structure A (Figure 1) is formed from

Synthetic reactions driven by electron-donor–acceptor (EDA) complexes

• Zhonglie Yang,
• Yutong Liu,
• Kun Cao,
• Xiaobin Zhang,
• Hezhong Jiang and
• Jiahong Li

Beilstein J. Org. Chem. 2021, 17, 771–799, doi:10.3762/bjoc.17.67

• , cyanides, esters, ethers, halides, and heterocycles, and various α-aminoketones (32 examples) can be yielded in 90% isolated yield. According to the author, the EDA complex had a six-membered-ring transient state, and the imine also acted as an organic base (abstracting proton from α-keto acid), proving

Annulation of a 1,3-dithiole ring to a sterically hindered o-quinone core. Novel ditopic redox-active ligands

• Sergey V. Norkov,
• Anton V. Cherkasov,
• Andrey S. Shavyrin,
• Maxim V. Arsenyev,
• Viacheslav A. Kuropatov and
• Vladimir K. Cherkasov

Beilstein J. Org. Chem. 2021, 17, 273–282, doi:10.3762/bjoc.17.26

• mixture. X-ray diffraction data revealed that the bond lengths distribution in the six-membered ring of 6b is typical of sterically hindered o-quinones. The annulated fragment including the 1,3-dithiole cycle and the malononitrile unit is almost flat. The six-membered o-quinone ring is distorted due to

• structural data. The reaction of 4 with gem-dithiolate 5c resulted in o-quinone 6c in a good yield (Scheme 1, route 2). TLC control indicated that 6c was the only colored product in this synthesis. In o-quinone 6c the six-membered ring at the attached fragment exists in p-quinonoid form. According to the X

Synthesis of purines and adenines containing the hexafluoroisopropyl group

• Viacheslav Petrov,
• Rebecca J. Dooley,
• Alexander A. Marchione,
• Elizabeth L. Diaz,
• Brittany S. Clem and
• William Marshall

Beilstein J. Org. Chem. 2020, 16, 2739–2748, doi:10.3762/bjoc.16.224

• that with the CF3 moieties nearer the five-membered ring of the azabenzimidazole unit, and the rotamer of higher energy was that with the CF3 moieties near the six-membered ring (see Figure 4). Density functional theory calculations predict an enthalpy difference of 0.48 kcal⋅mol−1 between the two

Synthetic approaches to bowl-shaped π-conjugated sumanene and its congeners

• Shakeel Alvi and
• Rashid Ali

Beilstein J. Org. Chem. 2020, 16, 2212–2259, doi:10.3762/bjoc.16.186

Natural dolomitic limestone-catalyzed synthesis of benzimidazoles, dihydropyrimidinones, and highly substituted pyridines under ultrasound irradiation

• Kumar Godugu,
• Venkata Divya Sri Yadala,
• Mohammad Khaja Mohinuddin Pinjari,
• Trivikram Reddy Gundala,
• Lakshmi Reddy Sanapareddy and
• Chinna Gangi Reddy Nallagondu

Beilstein J. Org. Chem. 2020, 16, 1881–1900, doi:10.3762/bjoc.16.156

• confirmed that the reaction stopped at the bisimine I stage. This was due to the intramolecular hydrogen bonding between the hydrogen atom of the ortho-hydroxy group and the nitrogen atom of the imine group in a six-membered ring transition state [87]. Similarly, the reaction between 3-ethoxysalicylaldehyde

A cyclopeptide and three oligomycin-class polyketides produced by an underexplored actinomycete of the genus Pseudosporangium

• Shun Saito,
• Kota Atsumi,
• Tao Zhou,
• Keisuke Fukaya,
• Daisuke Urabe,
• Naoya Oku,
• Md. Rokon Ul Karim,
• Hisayuki Komaki and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2020, 16, 1100–1110, doi:10.3762/bjoc.16.97

• six-membered ring and the axial orientations of H-31 and the H-41 methyl group. Therefore, the relative configuration of the spiroacetal ring was established to be (23S*,24R*,25S*,27R*,30S*,31S*) (Figure 7). The molecular formula of pseudosporamicin B (3) was determined to be C41H70O9 based on a

One-pot synthesis of dicyclopenta-fused peropyrene via a fourfold alkyne annulation

• Ji Ma,
• Yubin Fu,
• Junzhi Liu and
• Xinliang Feng

Beilstein J. Org. Chem. 2020, 16, 791–797, doi:10.3762/bjoc.16.72

• -membered ring B. The large difference between the LUMO and HOMO leads to an intramolecular charge transfer, resulting in broad absorption bands in the UV–vis spectrum (Figure 3a) [36]. In addition, the LUMO energy of 1 (−2.98 eV) is significantly lower than that of 6 (−2.38 eV), which is responsible for

• aromatic core. In contrast to 6, compound 1 presents a significant difference in the shape of its molecular orbitals. The LUMO of 1 is mainly localized on the core, whereas the HOMO keeps a line of high electron density along the fused five-membered rings (rings A and C in Figure 2d) and the central six

Regio- and stereoselective synthesis of new ensembles of diversely functionalized 1,3-thiaselenol-2-ylmethyl selenides by a double rearrangement reaction

• Svetlana V. Amosova,
• Andrey A. Filippov,
• Nataliya A. Makhaeva,
• Alexander I. Albanov and
• Vladimir A. Potapov

Beilstein J. Org. Chem. 2020, 16, 515–523, doi:10.3762/bjoc.16.47

• group in the six-membered ring 5 are not equivalent. As consequence they are observed in the 1H NMR spectrum as two doublets of doublets with geminal and vicinal coupling constants with the SCH-proton in the same ring (3.79 ppm, 2JН,Н = 12.4 Hz, 3JН,Н = 2.1 Hz; 3.33 ppm, 2JН,Н = 12.4 Hz, 3JН,Н = 6.6 Hz

Combination of multicomponent KA² and Pauson–Khand reactions: short synthesis of spirocyclic pyrrolocyclopentenones

• Riccardo Innocenti,
• Elena Lenci,
• Gloria Menchi and
• Andrea Trabocchi

Beilstein J. Org. Chem. 2020, 16, 200–211, doi:10.3762/bjoc.16.23

• imposed by the adjacent phenyl and cyclohexyl rings [59]. The treatment of compound 5 under Schmidt reaction conditions with sodium azide in TFA [60] resulted in the conversion to the corresponding six-membered ring lactam 39 in 41% yield, demonstrating the reactivity of the enone 5 at the carbonyl group

Functionalization of the imidazo[1,2-a]pyridine ring in α-phosphonoacrylates and α-phosphonopropionates via microwave-assisted Mizoroki–Heck reaction

• Damian Kusy,
• Agata Wojciechowska,
• Joanna Małolepsza and
• Katarzyna M. Błażewska

Beilstein J. Org. Chem. 2020, 16, 15–21, doi:10.3762/bjoc.16.3

• halogen substituent in the imidazo[1,2-a]pyridine ring on its reactivity in the Mizoroki–Heck reaction. We confined our studies to the analogs bearing substituents at positions 6, 7, and 8 of the six-membered ring of the imidazo[1,2-a]pyridine (1a–f, in Figure 1) [24]. We found that the reaction occurred

Photochromic diarylethene ligands featuring 2-(imidazol-2-yl)pyridine coordination site and their iron(II) complexes

• Andrey G. Lvov,
• Max Mörtel,
• Anton V. Yadykov,
• Frank W. Heinemann,
• Valerii Z. Shirinian and
• Marat M. Khusniyarov

Beilstein J. Org. Chem. 2019, 15, 2428–2437, doi:10.3762/bjoc.15.235

• comparison with 4. The expansion of the five-membered carbocyclic bridge to a six-membered ring in 7 leads to a slight hypsochromic shift. The presence of a CO2Et group in the cyclohexenone bridge in 6 results in further minor hypsochromic shift. Thus, the absorption maxima of the closed-ring ligands are

Recent advances in transition-metal-catalyzed incorporation of fluorine-containing groups

• Xiaowei Li,
• Xiaolin Shi,
• Xiangqian Li and
• Dayong Shi

Beilstein J. Org. Chem. 2019, 15, 2213–2270, doi:10.3762/bjoc.15.218

• five and six-membered ring β-ketoesters were converted to the corresponding products in high yields and enantioselectivities (Scheme 56). In 2018, the first example for the copper-catalyzed stereospecific trifluoromethylation of secondary propargyl sulfonates was described by the group of Zhang [116

Genome mining in Trichoderma viride J1-030: discovery and identification of novel sesquiterpene synthase and its products

• Xiang Sun,
• You-Sheng Cai,
• Yujie Yuan,
• Guangkai Bian,
• Ziling Ye,
• Zixin Deng and
• Tiangang Liu

Beilstein J. Org. Chem. 2019, 15, 2052–2058, doi:10.3762/bjoc.15.202

• precursor FPP via sesquiterpene synthase have been described. Nearly 75% of these structures have at least one six-membered ring; 69% of these contain five-membered rings, occupying a large portion. Three- and seven-membered ring structures account for just 21% and 24% of these structures, respectively

N-(1-Phenylethyl)aziridine-2-carboxylate esters in the synthesis of biologically relevant compounds

• Iwona E. Głowacka,
• Aleksandra Trocha,
• Andrzej E. Wróblewski and
• Dorota G. Piotrowska

Beilstein J. Org. Chem. 2019, 15, 1722–1757, doi:10.3762/bjoc.15.168

Different reactivity of phosphorylallenes under the action of Brønsted or Lewis acids: a crucial role of involvement of the P=O group in intra- or intermolecular interactions at the formation of cationic intermediates

• Stanislav V. Lozovskiy,
• Alexander Yu. Ivanov and
• Aleksander V. Vasilyev

Beilstein J. Org. Chem. 2019, 15, 1491–1504, doi:10.3762/bjoc.15.151

• species E1 (δ 53 ppm) and E2 (δ 43 ppm). This difference may reveal that phosphorus in cation E4 is bound to a carbon atom, rather than to a heteroatom O or N, like in E1 and E2. Structurally close six-membered ring cations, having the C–P bond, resonate at 30.5–31.9 in 31P NMR [16], that is close to the

Hoveyda–Grubbs catalysts with an N→Ru coordinate bond in a six-membered ring. Synthesis of stable, industrially scalable, highly efficient ruthenium metathesis catalysts and 2-vinylbenzylamine ligands as their precursors

• Kirill B. Polyanskii,
• Kseniia A. Alekseeva,
• Pavel V. Raspertov,
• Pavel A. Kumandin,
• Eugeniya V. Nikitina,
• Atash V. Gurbanov and
• Fedor I. Zubkov

Beilstein J. Org. Chem. 2019, 15, 769–779, doi:10.3762/bjoc.15.73

• has the greatest industrial importance [3][9][29][30][31]. Noteworthy, there are only rare and sporadic publications describing the synthesis and properties of the Grubbs catalysts with an N→Ru coordinate bond in a six-membered ring [32][33][34][35][36][37][38]. Thus, the present work opens a series

• ruthenium atom. The ruthenium-containing six-membered ring has a slightly distorted envelope conformation with a ca. 51° to 54° deviation of the nitrogen atom from the mean plane of other five atoms. The most important feature of the catalyst structure is the length of the ruthenium–nitrogen bond, which

• synthesis of 2-(N,N-dialkylaminomethyl)styrenes. The resultant vinyl benzenes are excellent precursors for the synthesis of a new type of Hoveyda–Grubbs catalysts bearing an N→Ru coordinate bond in a six-membered ring. This process does not require the use of complex equipment, extremely expensive or toxic

Aqueous olefin metathesis: recent developments and applications

• Valerio Sabatino and
• Thomas R. Ward

Beilstein J. Org. Chem. 2019, 15, 445–468, doi:10.3762/bjoc.15.39

• formation of the metallacyclobutane intermediate. The modest activities of butenyl and pentenyl sulfides were rationalized by the formation of five and six-membered ring chelates. The aqueous CM with allyl sulfides was also exploited by Hunter et al. for the generation of a metathesis-based dynamic

Synthesis, biophysical properties, and RNase H activity of 6’-difluoro[4.3.0]bicyclo-DNA

• Sibylle Frei,
• Adam K. Katolik and
• Christian J. Leumann

Beilstein J. Org. Chem. 2019, 15, 79–88, doi:10.3762/bjoc.15.9

• denaturation experiments with complementary RNA displayed a duplex stabilization for FHNA and a duplex destabilization for Ara-FHNA. The reason for the stabilization of the former was accounted to a combination of the increased rigidity of the six-membered ring and the positioning of the axial oriented