Synthesis of legonmycins A and B, C(7a)-hydroxylated bacterial pyrrolizidines

• Wilfred J. M. Lewis,
• David M. Shaw and
• Jeremy Robertson

Beilstein J. Org. Chem. 2021, 17, 334–342, doi:10.3762/bjoc.17.31

• , it seems reasonable to envisage that ready equilibration of the pyrrolizixenamide enantiomers (and those of related molecules such as jenamidine A and the prelegonmycins) via the hydroxypyrrole tautomer, and aerial oxidation of this electron-rich intermediate, would offer a non-enzymatic route to the

Selective synthesis of α-organylthio esters and α-organylthio ketones from β-keto esters and sodium S-organyl sulfurothioates under basic conditions

• Jean C. Kazmierczak,
• Roberta Cargnelutti,
• Thiago Barcellos,
• Claudio C. Silveira and
• Ricardo F. Schumacher

Beilstein J. Org. Chem. 2021, 17, 234–244, doi:10.3762/bjoc.17.24

• between the keto and the enol tautomer is given based on the 1H NMR analysis. These results are consistent with the report by Tan and collaborators [55] and are evidence to help understand the reaction mechanism. Although detailed mechanisms for these reactions remain to be elucidated, the literature has

• place in β-keto esters, which is followed by CO2 displacement under heating [61][62][63][64]. We assume that in our case, when only 2 equiv of base are used, the keto–enol tautomer intermediates undergo a hydrolysis–decarboxylation process preferentially to a retro-Claisen reaction. This process forms

Recent developments in enantioselective photocatalysis

• Callum Prentice,
• James Morrisson,
• Andrew D. Smith and
• Eli Zysman-Colman

Beilstein J. Org. Chem. 2020, 16, 2363–2441, doi:10.3762/bjoc.16.197

• tautomer 147, and the CPA-catalysed Povarov reaction between them gives the enantioenriched THQ 144 in good yields and enantioselectivities (4 examples, up to 97:3 er). This reactivity has been extended to enamides 148, with the imine generated from the α-amino acid 149 now reacting with 148 in a CPA

• -catalysed Povarov reaction rather than with its own tautomer (Scheme 21a) [70]. Zhang and You developed a catalytic dearomatisation reaction of indoles 150 using similar chemistry, where the generated imine 151 now reacts intramolecularly with a pendant nucleophile and is further oxidised to a carbocation

Regiodivergent synthesis of functionalized pyrimidines and imidazoles through phenacyl azides in deep eutectic solvents

• Paola Vitale,
• Luciana Cicco,
• Ilaria Cellamare,
• Filippo M. Perna,
• Antonio Salomone and
• Vito Capriati

Beilstein J. Org. Chem. 2020, 16, 1915–1923, doi:10.3762/bjoc.16.158

• putative azide tautomer 4, the latter deriving from the corresponding α-phenacyl azide precursor 2 via an acid-catalyzed enolization process [34]. The pyrolysis of α-azido ketones in conventional VOCs (trichlorobenzene) is known to take place under harsh conditions, which are based on heating the mixture

• after column chromatography on silica gel; only one tautomer has been depicted for simplicity; imidazoles 3c/3c', 3i/3i', 3j, 3k/3k' were found to precipitate as they formed, and were isolated by filtration/centrifugation and washing with a few drops of AcOEt or Et2O; synthesis of imidazoles 3k/3k': 10

Rearrangement of o-(pivaloylaminomethyl)benzaldehydes: an experimental and computational study

• Csilla Hargitai,
• Györgyi Koványi-Lax,
• Tamás Nagy,
• Péter Ábrányi-Balogh,
• András Dancsó,
• Gábor Tóth,
• Judit Halász,
• Angéla Pandur,
• Gyula Simig and
• Balázs Volk

Beilstein J. Org. Chem. 2020, 16, 1636–1648, doi:10.3762/bjoc.16.136

• , gave isomeric aldehyde 2a (48%) and the dimer-like racemic product 3a (11%). Both transformations were rationalized by the intermediacy of the isoindole 4a (Scheme 1). The formation of aldehyde 2a can be explained by a protonation of the ring tautomer 1a, followed by an acid-catalyzed water elimination

4-Hydroxy-3-methyl-2(1H)-quinolone, originally discovered from a Brassicaceae plant, produced by a soil bacterium of the genus Burkholderia sp.: determination of a preferred tautomer and antioxidant activity

• Dandan Li,
• Naoya Oku,
• Yukiko Shinozaki,
• Yoichi Kurokawa and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2020, 16, 1489–1494, doi:10.3762/bjoc.16.124

• compounds and a synthetic preparation of 1, allowed its first full NMR characterization and identification of 2-quinolone but not 2-quinolinol (2) as the preferred tautomer for this heterocyclic system. While the metal-chelating activity was negligible, compound 1 at 10 μM, a concentration lower than that

• made until this work. In addition, HMBC correlations from the enol proton and the comparison of the chemical shift of the carbon adjacent to the nitrogen with the literature values unequivocally determined 2-quinolone to be a preferred tautomer of this heterocyclic system. The same C8a carbons of

One-step route to tricyclic fused 1,2,3,4-tetrahydroisoquinoline systems via the Castagnoli–Cushman protocol

• Aleksandar Pashev,
• Nikola Burdzhiev and
• Elena Stanoeva

Beilstein J. Org. Chem. 2020, 16, 1456–1464, doi:10.3762/bjoc.16.121

• -ambident nucleophiles with electrophilic species [47][48][49][50]. Thus the formation of compounds 25–27 could be rationalized as including an initial nucleophilic attack of the enamine tautomer 19a of 3,4-dihydroisoquinoline 19 to the carbonyl carbon atoms of the anhydrides 5–7 followed by an anhydride

• ring opening. In the case of anhydrides 6 and 7, a 6-exo-trig ring-closure reaction of the tautomer form 30a leads to the observed products 25 and 26, according to the plausible mechanistic suggestion presented in Scheme 7. In the case of compound 27 (X = direct bond), the reaction could be

Iodine-mediated hydration of alkynes on keto-functionalized scaffolds: mechanistic insight and the regiospecific hydration of internal alkynes

• Zachary Lee,
• Brandon R. Jones,
• Nyochembeng Nkengbeza,
• Michael Phillips,
• Kayla Valentine,
• Alexis Stewart,
• Brandon Sellers,
• Nicholas Shuber and
• Karelle S. Aiken

Beilstein J. Org. Chem. 2019, 15, 2747–2752, doi:10.3762/bjoc.15.265

• group participation for 5-exo-dig cyclization from 3 to 4. It was further hypothesized that the reaction continues through an α-iodo intermediate 6, a tautomer of 5, from which deiodination followed by tautomerization of 7 produces the final product 2. In the studies described herein, NMR experiments

Anion-driven encapsulation of cationic guests inside pyridine[4]arene dimers

• Anniina Kiesilä,
• Jani O. Moilanen,
• Anneli Kruve,
• Christoph A. Schalley,
• Perdita Barran and
• Elina Kalenius

Beilstein J. Org. Chem. 2019, 15, 2486–2492, doi:10.3762/bjoc.15.241

• further calculations were carried out for the most stable tautomer. The conformational analysis revealed that the pyridone tautomer (1) is ≈150 kJ/mol lower in energy than the dihydroxy tautomer (1OH). The geometry optimizations showed that the geometry of [12 + Me4Nendo]+ is similar without and with

Installation of -SO₂F groups onto primary amides

• Jing Liu,
• Shi-Meng Wang,
• Njud S. Alharbi and
• Hua-Li Qin

Beilstein J. Org. Chem. 2019, 15, 1907–1912, doi:10.3762/bjoc.15.186

• tautomerism of amides [43] may occur in the reaction process and the tautomer 3e could react with Na2SO4 to generate 4e, which indicated that N–H connected with two electron-withdrawing groups (carbonyl, and SO2F) can behave as an acid to donate a proton for chemical transformations. This property of

Tautomerism as primary signaling mechanism in metal sensing: the case of amide group

• Vera Deneva,
• Georgi Dobrikov,
• Aurelien Crochet,
• Daniela Nedeltcheva,
• Katharina M. Fromm and
• Liudmil Antonov

Beilstein J. Org. Chem. 2019, 15, 1898–1906, doi:10.3762/bjoc.15.185

• been expected that the intramolecular hydrogen bonding (between the tautomeric hydroxy group and the nitrogen atom from the amide group) could stabilize the pure enol form in some solvents, the keto tautomer is also observed. This is a result from the formation of intramolecular associates in some

• tautomeric proton exchange has the same properties when the equilibrium is switched from one to the other tautomer. The tautomerism can be controlled by metal ion addition, when an ionophore unit is implemented in the tautomeric backbone. The conceptual idea to achieve the pure enol tautomer through

• intramolecular hydrogen bonding with the ionophore [7][8] is shown in Scheme 1. The complex formation ejects the tautomeric proton and stabilizes the keto tautomer. Several successful tautomeric ligands, based on 4-(phenyldiazenyl)naphthalen-1-ol (1) [8] (2 and 3, Scheme 2) as a tautomeric unit have been

Synthesis of ([1,2,4]triazolo[4,3-a]pyridin-3-ylmethyl)phosphonates and their benzo derivatives via 5-exo-dig cyclization

• Aleksandr S. Krylov,
• Artem A. Petrosian,
• Julia L. Piterskaya,
• Nataly I. Svintsitskaya and
• Albina V. Dogadina

Beilstein J. Org. Chem. 2019, 15, 1563–1568, doi:10.3762/bjoc.15.159

• nucleophilic substitution of chlorine in the chloroethynylphosphonate to form ynamine intermediate A, isomerization of which provides ketenimine B. Further formation of the imine tautomer C enables an intramolecular 5-exo-dig cyclization to furnish the title [1,2,4]triazolo[4,3-a]pyridines (Scheme 6

Synthesis and fluorescent properties of N(9)-alkylated 2-amino-6-triazolylpurines and 7-deazapurines

• Andrejs Šišuļins,
• Jonas Bucevičius,
• Yu-Ting Tseng,
• Irina Novosjolova,
• Kaspars Traskovskis,
• Ērika Bizdēna,
• Huan-Tsung Chang,
• Sigitas Tumkevičius and
• Māris Turks

Beilstein J. Org. Chem. 2019, 15, 474–489, doi:10.3762/bjoc.15.41

• stability [39]. Regarding the tautomerism in 2,6-diazido-substituted starting materials, it has been studied previously for both purine [41] and 7-deazapurine [52] derivatives. In both cases practically only the diazido forms are observed in chloroform solution, but the proportion of the tetrazole tautomer

• increases with the increase of solvent polarity. Additionally, X-ray analysis of 2,6-diazidopurine 2'-deoxyribonucleoside revealed the exclusive existence of the azido tautomer in the solid state [41]. The discovered ability of the azido group to be substituted with amines at C(2) position was used for the

Computational characterization of enzyme-bound thiamin diphosphate reveals a surprisingly stable tricyclic state: implications for catalysis

• Ferran Planas,
• Michael J. McLeish and
• Fahmi Himo

Beilstein J. Org. Chem. 2019, 15, 145–159, doi:10.3762/bjoc.15.15

• + state. With only one known exception [7], the protonation/deprotonation of the N1′ position is performed by a highly conserved glutamic acid residue that is thought to stabilize the imino tautomer IP [6]. The subsequent loss of a proton from N4′ of APH+ gives the IP state. Deprotonation of the C2

• hydrogen bonding distance of the C2 of the thiazolium ring [9][10][11][12][13][14]. While the importance of the catalytically critical ylide was readily recognized, obtaining evidence for the participation of the 4′-amino group and the imino tautomer IP proved more challenging. Initially, model compounds

Synthesis of functionalised β-keto amides by aminoacylation/domino fragmentation of β-enamino amides

• Pavel Yanev and
• Plamen Angelov

Beilstein J. Org. Chem. 2018, 14, 2602–2606, doi:10.3762/bjoc.14.238

• takes place after the addition of NaOAc (Scheme 4). It can be hypothesized that in acidic media the ammonium species 7, resulting from the deprotection of 3 followed by protonation, exists predominantly as an imino tautomer, stabilised by intramolecular H-bonding. Such a tautomer would be susceptible to

• process was slower and could be effectively avoided by limiting the deprotection time to 5 min in neat TFA. In this way a series of ω-amino-β-keto amides 11 with variable chain lengths and N-protection groups was successfully obtained (Scheme 6, Table 2). Minor amounts of the enol tautomer (1–10%) were

• resolved NMR spectra. Similar tautomerism was observed in 11d,b,g,k (n = 3), but with negligible proportion of the ring tautomer. Conclusion In conclusion, we have demonstrated that N-protected γ-amino-β-keto amides and ω-amino-β-keto amides can be obtained from amino acids and β-enamino amides through the

Determining the predominant tautomeric structure of iodine-based group-transfer reagents by ¹⁷O NMR spectroscopy

• Nico Santschi,
• Cody Ross Pitts,
• Benson J. Jelier and
• René Verel

Beilstein J. Org. Chem. 2018, 14, 2289–2294, doi:10.3762/bjoc.14.203

• transfer reagents, it was unequivocally demonstrated to exist as the acyclic thioperoxide tautomer 5b by Buchwald and co-workers in 2014 [4]. The structural reassignment was prompted by a series of remarkable, detailed inspections of 1H NMR spectra of precursors and congeners. A final structural

• tautomer in solution. Results and Discussion Arguably, the most common methods for structural elucidation of small organic molecules are one-dimensional 1H and 13C NMR spectroscopic techniques in combination with suitable two-dimensional experiments (COSY, HMBC, NOESY, etc.) [7]. However, in many cases

Hypervalent organoiodine compounds: from reagents to valuable building blocks in synthesis

• Gwendal Grelier,
• Benjamin Darses and
• Philippe Dauban

Beilstein J. Org. Chem. 2018, 14, 1508–1528, doi:10.3762/bjoc.14.128

• than its O-tautomer 88, the rearrangement step seems to be much faster. The use of the radical scavenger TEMPO had no effect on the reaction outcome suggesting that the initial hypothesis is correct. By screening additives, it was shown that the hypervalent iodine could be quickly generated in situ by

One hundred years of benzotropone chemistry

• Arif Dastan,
• Haydar Kilic and
• Nurullah Saracoglu

Beilstein J. Org. Chem. 2018, 14, 1120–1180, doi:10.3762/bjoc.14.98

Phosphodiester models for cleavage of nucleic acids

• Satu Mikkola,
• Tuomas Lönnberg and
• Harri Lönnberg

Beilstein J. Org. Chem. 2018, 14, 803–837, doi:10.3762/bjoc.14.68

• protonated. Compared to the pH-independent cleavage of UpU, the acceleration is 103-fold. It has been suggested, that the reaction proceeds through a minor tautomer having the 2´-OH deprotonated and one of the amino groups protonated, in spite of the fact that the mole fraction of this species is as low as

• guanylyl-3´,3´-(2´-amino-2´-deoxyuridine) has been accounted for by intermediary formation of a highly reactive minor tautomer (Scheme 10) [89]. The pKa value of the amino group is surprisingly low, 4.9 at 90 °C. Both the zwitterionic (amino group protonated) and monoanionic (amino group neutral) species

• , one order of magnitude faster than the cleavage of the zwitterion. This observation has led to the conclusion that the monoanion reacts through a minor tautomer having the 2´-OH deprotonated and the amino group protonated. The protonated amino group may facilitate the attack of the 2´-oxyanion by H

Enzyme-free genetic copying of DNA and RNA sequences

• Marilyne Sosson and
• Clemens Richert

Beilstein J. Org. Chem. 2018, 14, 603–617, doi:10.3762/bjoc.14.47

• above occur spontaneously in cold aqueous solution, without the need for mineral surfaces or enzymes. Condensation producing peptido nucleotides also occurs with other activating agents, such as cyanamide or carbonyl diimidazole (CDI). Cyanamide, a tautomer of unsubstituted carbodiimide, has long been

One-pot sequential synthesis of tetrasubstituted thiophenes via sulfur ylide-like intermediates

• Jun Ki Kim,
• Hwan Jung Lim,
• Kyung Chae Jeong and
• Seong Jun Park

Beilstein J. Org. Chem. 2018, 14, 243–252, doi:10.3762/bjoc.14.16

• thiophenes (8aa–ai) were obtained in moderate to excellent yields (47–92%). When different 1,3-diketones were applied, the yields were affected by the keto–enol tautomer ratio. Alkyl substituents (isopropyl and cyclopropyl), which promote the enol forms of the ketones, afforded thiophenes 8aj and 8ak in good

Nucleophilic dearomatization of 4-aza-6-nitrobenzofuroxan by CH acids in the synthesis of pharmacology-oriented compounds

• Alexey M. Starosotnikov,
• Dmitry V. Shkaev,
• Maxim A. Bastrakov,
• Ivan V. Fedyanin,
• Svyatoslav A. Shevelev and
• Igor L. Dalinger

Beilstein J. Org. Chem. 2017, 13, 2854–2861, doi:10.3762/bjoc.13.277

• the singlet at 2.34 ppm belongs to the methyl group. This is consistent with known data on fluorinated diketones: stability of the enol tautomer increases with the degree of fluorination [29][30]. Apparently this could explain the difference in ratios of tautomers in addition products of structurally

Regiodivergent condensation of 5-alkoxycarbonyl-1H-pyrrol-2,3-diones with cyclic ketazinones en route to spirocyclic scaffolds

• Alexey Yu. Dubovtsev,
• Maksim V. Dmitriev,
• Аndrey N. Maslivets and
• Michael Rubin

Beilstein J. Org. Chem. 2017, 13, 2179–2185, doi:10.3762/bjoc.13.218

• spirocyclization via conversion of 1,3-diones 8 into mono-hydrazones. Indeed, while mono-imines of these ketones strongly prefer keto-enamine tautomeric form 13 over enol-imine form 14 (Scheme 4) [44][45], the corresponding hydrazones have been reported to favor enol-hydrazone tautomer 16 (Scheme 4) [46][47][48

New approaches to organocatalysis based on C–H and C–X bonding for electrophilic substrate activation

• Pavel Nagorny and
• Zhankui Sun

Beilstein J. Org. Chem. 2016, 12, 2834–2848, doi:10.3762/bjoc.12.283

• substantial dipole moment (≈4.5 D) almost aligned with the C5–H bond and the relatively high acidity of this position (pKa(DMSO) = 27–28, for the 1H-tautomer). These heterocycles, which are easily available from 1,3-cycloaddition of alkynes and azides, can both form strong C–H bonds with hydrogen bond

Computational methods in drug discovery

• Sumudu P. Leelananda and
• Steffen Lindert

Beilstein J. Org. Chem. 2016, 12, 2694–2718, doi:10.3762/bjoc.12.267

• tautomer states are assigned [152]. The protonation states of structures are also important in prediction of docking poses because protonation states affect how ligands bind to the binding site [100]. Optimizing protonation states of binding pockets and also positions of polar hydrogens can lead to