Multi-faceted reactivity of N-fluorobenzenesulfonimide (NFSI) under mechanochemical conditions: fluorination, fluorodemethylation, sulfonylation, and amidation reactions

• José G. Hernández,
• Karen J. Ardila-Fierro,
• Dajana Barišić and
• Hervé Geneste

Beilstein J. Org. Chem. 2022, 18, 182–189, doi:10.3762/bjoc.18.20

• solution, the mechanochemical reactions were accomplished in the absence of solvents, in short reaction times, and in yields comparable to or higher than their solvent-based counterparts. Keywords: amidation; ball mill; fluorination; in situ monitoring; mechanochemistry; NFSI; Raman monitoring

• sustainable point of view, experimenting in small scale could prevent waste production and increase safety. However, miniaturization of mechanochemical reactions could also be an alternative to working with precious or expensive reagents and to facilitate monitoring of the reactions [27]. Under such reaction

• performed in situ reaction monitoring of the milling process by Raman spectroscopy [32][33]. In an experiment milling 1c with NFSI (1 equiv) we observed the consumption of NFSI after ca. 30 min of milling as evidenced by a reduction in the intensity of the band at 1197 cm−1 of NFSI (Figure S3 in Supporting

Tenacibactins K–M, cytotoxic siderophores from a coral-associated gliding bacterium of the genus Tenacibaculum

• Yasuhiro Igarashi,
• Yiwei Ge,
• Tao Zhou,
• Amit Raj Sharma,
• Enjuro Harunari,
• Naoya Oku and
• Agus Trianto

Beilstein J. Org. Chem. 2022, 18, 110–119, doi:10.3762/bjoc.18.12

• reaction monitoring (MRM) mode with the parameter setting “isCID = 0” and “Collision = 45”. An Agilent HP1200 HPLC system equipped with a diode array detector was used for analysis and purification. The absorbance of microtitre plate wells was read on a Thermo Scientific Multiskan Sky microplate reader

The enzyme mechanism of patchoulol synthase

• Houchao Xu,
• Bernd Goldfuss,
• Gregor Schnakenburg and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2022, 18, 13–24, doi:10.3762/bjoc.18.2

• isopentenyl diphosphate isomerase (IDI) from E. coli [20][21], FPPS, and PTS (Figure S12 in Supporting Information File 1). The additional 13C-labellings in these experiments serve for a sensitive monitoring of deuterium incorporation through HSQC spectroscopy. All X-ray and labelling experiments confirmed

Unsaturated fatty acids and a prenylated tryptophan derivative from a rare actinomycete of the genus Couchioplanes

• Shun Saito,
• Kanji Indo,
• Naoya Oku,
• Hisayuki Komaki,
• Masashi Kawasaki and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2021, 17, 2939–2949, doi:10.3762/bjoc.17.203

• /min. Peaks for (S)- and (R)-4' were detected at 11.3 min and 14.3 min, respectively, by monitoring the absorbance at 250 nm. Preparation of PGME amides 6a and 6b In a manner similar to a procedure from [21], to a solution of 6 (1.0 mg, 3.2 μmol) in dry N,N-dimethylformamide (100 μL) and N,N

Total synthesis of the O-antigen repeating unit of Providencia stuartii O49 serotype through linear and one-pot assemblies

• Tanmoy Halder and
• Somnath Yadav

Beilstein J. Org. Chem. 2021, 17, 2915–2921, doi:10.3762/bjoc.17.199

• acceptor 9 in the presence of TMSOTf as promoter (Scheme 5). After 1 h of reaction, TLC monitoring indicated the full consumption of the starting materials. Analysis of a small aliquot of the reaction mixture by HRMS confirmed the formation of the desired disaccharide. Then, to the same pot, the second

• monosaccharide acceptor 7 was added, followed by the addition of NIS and TMSOTf. After 15 min of reaction, TLC monitoring showed complete consumption of the donor. Work-up of the reaction mixture followed by chromatographic purification afforded the pure trisaccharide 2 as a single isomer in an overall yield of

Silica gel and microwave-promoted synthesis of dihydropyrrolizines and tetrahydroindolizines from enaminones

• Robin Klintworth,
• Garreth L. Morgans,
• Stefania M. Scalzullo,
• Charles B. de Koning,
• Willem A. L. van Otterlo and
• Joseph P. Michael

Beilstein J. Org. Chem. 2021, 17, 2543–2552, doi:10.3762/bjoc.17.170

• enaminones 15 to pyrrolizines 19 was determined by TLC monitoring of the reaction mixture after successive time intervals. A fairly accurate estimate of the reaction time as a function of the changing acyl substituent could thus be obtained to within 30 seconds. As can be seen from Table 2, we observed a

Constrained thermoresponsive polymers – new insights into fundamentals and applications

• Patricia Flemming,
• Alexander S. Münch,
• Andreas Fery and
• Petra Uhlmann

Beilstein J. Org. Chem. 2021, 17, 2123–2163, doi:10.3762/bjoc.17.138

Cerium-photocatalyzed aerobic oxidation of benzylic alcohols to aldehydes and ketones

• Girish Suresh Yedase,
• Sumit Kumar,
• Jessica Stahl,
• Burkhard König and
• Veera Reddy Yatham

Beilstein J. Org. Chem. 2021, 17, 1727–1732, doi:10.3762/bjoc.17.121

• inhibition of the catalytic cycle upon the addition of TEMPO revealed that the reaction proceeds through radical intermediates. Next, we carried out UV–vis monitoring experiments in order to verify whether the interaction with the substituted benzyl alcohols and CeIV could lead to a ligand-to-metal charge

A straightforward conversion of 1,4-quinones into polycyclic pyrazoles via [3 + 2]-cycloaddition with fluorinated nitrile imines

• Greta Utecht-Jarzyńska,
• Karolina Nagła,
• Grzegorz Mlostoń,
• Heinz Heimgartner,
• Marcin Palusiak and
• Marcin Jasiński

Beilstein J. Org. Chem. 2021, 17, 1509–1517, doi:10.3762/bjoc.17.108

• until the starting material 1 was fully consumed (based on TLC monitoring, petroleum ether/dichloromethane 1:1). After the resulting precipitate and unconsumed carbonate were filtered off, the solvent was removed under reduced pressure. The crude mixtures were purified by CC using silica gel as the

Design, synthesis and photophysical properties of novel star-shaped truxene-based heterocycles utilizing ring-closing metathesis, Clauson–Kaas, Van Leusen and Ullmann-type reactions as key tools

• Shakeel Alvi and
• Rashid Ali

Beilstein J. Org. Chem. 2021, 17, 1374–1384, doi:10.3762/bjoc.17.96

• atmosphere. The flask was cooled to 0 °C and stirred viciously after that n-BuBr (11.30 mL, 105.12 mmol) was slowly added to the flask, and the stirring was continued for 24 h at room temperature (rt), till the completion of the reaction (TLC monitoring). Then, the reaction was quenched with water and the

• , SnCl2·2H2O (16.63 g, 73.5 mmol), compound 8 (2 g, 2.45 mmol) and dry ethyl acetate (60 mL) were added. Later, the resulting mixture was refluxed for 8 h and after completion of the reaction (TLC monitoring), the solution was quenched with aqueous saturated sodium bicarbonate solution within an ice bath

• ) and allyl bromide (0.48 mL, 5.52 mmol) at 0 °C under nitrogen atmosphere. The mixture was stirred at rt for 12 h. After completion of the reaction (TLC monitoring), the reaction mixture was quenched with saturated NH4Cl and the aqueous layer was extracted with EtOAc (50 mL × 3), dried over Na2SO4. The

A comprehensive review of flow chemistry techniques tailored to the flavours and fragrances industries

• Guido Gambacorta,
• James S. Sharley and
• Ian R. Baxendale

Beilstein J. Org. Chem. 2021, 17, 1181–1312, doi:10.3762/bjoc.17.90

• temperature and pressure range access, the potential for in-line purification, monitoring and telescoping, linear scalability and more efficient mixing. These applications are very attractive for a synthetic chemist in all settings, especially considering the current ever-increasing industrial pressure to

• direct diagnostics to be obtained facilitating rapid analysis of the content and assessment of the extent of reaction in real-time. Several in-line monitoring tools, for example, ReactIR [58][59][60][61][62] and flow based NMR [63][64][65][66] which allow for substrate specific, non-consuming analysis

• monitoring features such as pressure sensors that can both detect, assess, and if necessary, invoke emergency venting or diversion of material to auxiliary depressurisation stages, often without needing a full reactor shut down. There are numerous examples within the literature in which a flow synthesis has

Synthesis of 10-O-aryl-substituted berberine derivatives by Chan–Evans–Lam coupling and investigation of their DNA-binding properties

• Peter Jonas Wickhorst,
• Mathilda Blachnik,
• Denisa Lagumdzija and
• Heiko Ihmels

Beilstein J. Org. Chem. 2021, 17, 991–1000, doi:10.3762/bjoc.17.81

• monitoring of the temperature-dependent Förster resonance energy transfer (FRET) between the dyes [46]. The particular oligonucleotide sequences were chosen because they are known to be involved in biologically relevant processes, namely in the transcription regulation of myc (FmycT) [47][48], kit (FkitT

A chromatography-free and aqueous waste-free process for thioamide preparation with Lawesson’s reagent

• Ke Wu,
• Yichen Ling,
• An Ding,
• Liqun Jin,
• Nan Sun,
• Baoxiang Hu,
• Zhenlu Shen and
• Xinquan Hu

Beilstein J. Org. Chem. 2021, 17, 805–812, doi:10.3762/bjoc.17.69

• following the same procedure as described above for the EtOH treatment. To our surprise, the decomposition was much slower as expected (TLC monitoring, see Supporting Information File 1). It was assumed that the ring-opening could be influenced by water or by the in situ-generated thiophosphonic acid. Thus

• longer time for the reaction with LR was essential for the completion of the reaction according to TLC monitoring. Following the similar workup procedure as described for compound 4, the resulting crude product was recrystallized from toluene to afford the product as bright-yellow crystalline solid in 91

• a nitrogen atmosphere. The reaction was completed in 3 h by TLC monitoring. Then, to the cooled mixture, were added 100 mL of ethylene glycol (excess), together with 1.0 mL of water, and the resulting mixture was stirred at 95 °C. TLC monitoring of the toluene layer showed that the byproduct A from

Effective microwave-assisted approach to 1,2,3-triazolobenzodiazepinones via tandem Ugi reaction/catalyst-free intramolecular azide–alkyne cycloaddition

• Maryna O. Mazur,
• Oleksii S. Zhelavskyi,
• Eugene M. Zviagin,
• Svitlana V. Shishkina,
• Vladimir I. Musatov,
• Maksim A. Kolosov,
• Elena H. Shvets,
• Anna Yu. Andryushchenko and
• Valentyn A. Chebanov

Beilstein J. Org. Chem. 2021, 17, 678–687, doi:10.3762/bjoc.17.57

• solubility [20]. Firstly, we used a procedure similar to described by I. Akritopoulou-Zanze et al. [13] for cyclization: compound 6aab was refluxed in benzene for 8 hours until TLC monitoring demonstrated the full transformation of starting material into a new compound. The evaporation of the solution gave a

Synthesis of (Z)-3-[amino(phenyl)methylidene]-1,3-dihydro-2H-indol-2-ones using an Eschenmoser coupling reaction

• Lukáš Marek,
• Lukáš Kolman,
• Jiří Váňa,
• Jan Svoboda and
• Jiří Hanusek

Beilstein J. Org. Chem. 2021, 17, 527–539, doi:10.3762/bjoc.17.47

• minimum amount of dry DMF and a saturated solution of 3-bromooxindole (1a–c, n1a–c) in dry DMF was added. The reaction mixture was stirred for 20 h at room temperature (TLC monitoring; silica gel plates/EtOAc/hexane) and then diluted with an aqueous NaHCO3 solution (5%, 50 mL). The suspension was

CF₃-substituted carbocations: underexploited intermediates with great potential in modern synthetic chemistry

• Anthony J. Fernandes,
• Armen Panossian,
• Bastien Michelet,
• Agnès Martin-Mingot,
• Frédéric R. Leroux and
• Sébastien Thibaudeau

Beilstein J. Org. Chem. 2021, 17, 343–378, doi:10.3762/bjoc.17.32

Regioselective chemoenzymatic syntheses of ferulate conjugates as chromogenic substrates for feruloyl esterases

• Olga Gherbovet,
• Fernando Ferreira,
• Apolline Clément,
• Mélanie Ragon,
• Julien Durand,
• Sophie Bozonnet,
• Michael J. O'Donohue and
• Régis Fauré

Beilstein J. Org. Chem. 2021, 17, 325–333, doi:10.3762/bjoc.17.30

• both pathways. a3-step pathway. b1-step pathway. (A) Spectrometric monitoring (at 530 nm) of 4NTC released after the action of Fae on 12 in the presence of sodium periodate and (B) control reactions of the discontinuous assay of the Fae-mediated hydrolysis of 12. The optical density (OD) was measured

¹⁹F NMR as a tool in chemical biology

• Diana Gimenez,
• Aoife Phelan,
• Cormac D. Murphy and
• Steven L. Cobb

Beilstein J. Org. Chem. 2021, 17, 293–318, doi:10.3762/bjoc.17.28

• inhibitors in situ using 19F NMR spectroscopy (Figure 6). For this, the activity of the membrane-bound FAAH enzyme was evaluated by monitoring the hydrolysis of a fluorinated anandamide analogue ARN1203, a previously reported FAAH substrate, to arachidonic acid and 1-amino-3-fluoropropanol in the presence

• Granqvist et al. [101], the 19F NMR signals observed when employing these probes to evaluate the thermal denaturation of a range of RNA hairpins were indeed found to be sensitive enough to allow the monitoring of their secondary structural changes with relatively wide shift dispersion. It also enabled to

• the detection of the new compounds in the complex supernatants of organisms producing non-ribosomal peptides and polyketides. It has been especially useful for monitoring the incorporation

Au(III) complexes with tetradentate-cyclam-based ligands

• Ann Christin Reiersølmoen,
• Thomas N. Solvi and
• Anne Fiksdahl

Beilstein J. Org. Chem. 2021, 17, 186–192, doi:10.3762/bjoc.17.18

• moderate to excellent yields of tetracoordinated 5a-Au(III) and 6a-Au(III) N,N,N,N-complexes with alternating five- and six-membered chelate rings (50% and 96%, respectively, Scheme 3). Monitoring the formation of complex 5a-Au(III), using 1H NMR, and 1H,15N-HMBC, clearly indicated a tetra-nitrogen

Supramolecular polymerization of sulfated dendritic peptide amphiphiles into multivalent L-selectin binders

• David Straßburger,
• Svenja Herziger,
• Katharina Huth,
• Moritz Urschbach,
• Rainer Haag and
• Pol Besenius

Beilstein J. Org. Chem. 2021, 17, 97–104, doi:10.3762/bjoc.17.10

• copper-catalyzed azide–alkyne cycloaddition (Scheme 2). The reaction took place in degassed DMSO at 50 °C with CuSO4 pentahydrate, sodium ascorbate and tris(benzyltriazolylmethyl)amine (TBTA) as chelating species. HPLC-monitoring of the reaction showed a full conversion after three days and the crude

The fluorescence of a mercury probe based on osthol

• Guangyan Luo,
• Zhishu Zeng,
• Lin Zhang,
• Zhu Tao and
• Qianjun Zhang

Beilstein J. Org. Chem. 2021, 17, 22–27, doi:10.3762/bjoc.17.3

• be used for the quantitative detection and monitoring of mercury ions in the environment. Results and Discussion OST fluorescence probe for Hg2+ identification Selectivity of the fluorescent OST probe to metal ions The specificity of a probe for metal ions is the key factor to evaluate the

Secondary metabolites of Bacillus subtilis impact the assembly of soil-derived semisynthetic bacterial communities

• Heiko T. Kiesewalter,
• Carlos N. Lozano-Andrade,
• Mikael L. Strube and
• Ákos T. Kovács

Beilstein J. Org. Chem. 2020, 16, 2983–2998, doi:10.3762/bjoc.16.248

• contained 13 genera with a relative abundance of >0.19% in at least one mock community. Furthermore, it was demonstrated that the addition of B. subtilis suppressed the genera Lysinibacillus and Viridibacillus. Additional optical density (OD)-based growth monitoring of the selected strain Lysinibacillus

• significance of pairs was determined with the Welch two-sample t-test, and the differences among groups >2 was determined with the one-way analysis of variance (ANOVA) test and the Tukey HSD test. The statistical significance was determined with an alpha level <0.05. Growth monitoring of L. fusiformis

Selected peptide-based fluorescent probes for biological applications

• Debabrata Maity

Beilstein J. Org. Chem. 2020, 16, 2971–2982, doi:10.3762/bjoc.16.247

• labeled with environmentally sensitive/FRET fluorophores have allowed direct detection/monitoring of biomolecules in aqueous media and in live cells. In this review, key peptide-based approaches for different biological applications are presented. Keywords: fluorescent probe; fluorophores; molecular

• detection The genetic information carrier nucleic acids are present in nearly all living organisms. Fluorescence monitoring of nucleic acids has become increasingly important in medical diagnosis, drug discovery, environmental monitoring, food safety etc. [40][41]. Schmuck et al. reported several

• excimer (490 nm) to monomer emission (406 nm, Figure 3B). Thus, monitoring the relative fluorescence intensities at two wavelengths (F406/F490) allowed the ratiometric detection of nucleic acids. Schmuck et al. reported a similar cationic peptide beacon 3 coupled with a FRET pair, a naphthalene donor and

Controlled decomposition of SF₆ by electrochemical reduction

• Sébastien Bouvet,
• Bruce Pégot,
• Stéphane Sengmany,
• Erwan Le Gall,
• Eric Léonel,
• Anne-Marie Goncalves and
• Emmanuel Magnier

Beilstein J. Org. Chem. 2020, 16, 2948–2953, doi:10.3762/bjoc.16.244

• monitoring the potential scan rate. By cyclic voltametry, unlike macroelectrodes, the polarization of microelectrodes with a low potential scan rate (≤25 mV/s) leads to a drastic decrease of Cottrel contribution which involves the disappearance of current waves. The resulting current becomes a stationary

UV resonance Raman spectroscopy of the supramolecular ligand guanidiniocarbonyl indole (GCI) with 244 nm laser excitation

• Tim Holtum,
• Vikas Kumar,
• Daniel Sebena,
• Jens Voskuhl and
• Sebastian Schlücker

Beilstein J. Org. Chem. 2020, 16, 2911–2919, doi:10.3762/bjoc.16.240

• , Universitätsstrasse 7, 45141 Essen, Germany 10.3762/bjoc.16.240 Abstract Ultraviolet resonance Raman (UVRR) spectroscopy is a powerful vibrational spectroscopic technique for the label-free monitoring of molecular recognition of peptides or proteins with supramolecular ligands such as guanidiniocarbonyl pyrroles

• selectivity for monitoring the CBS, but the resulting UVRR spectrum overlaps with the UV-excited autofluorescence from the aromatic binding partners. This necessitates the use of a laser excitation <260 nm for spectrally separating the UVRR spectrum of the supramolecular ligand from the UV-excited

• strengths. Various spectroscopic techniques can be employed for monitoring these changes. For example, electronic absorption or fluorescence spectroscopy can probe the spectral differences due to the complexation of the supramolecular ligand with a peptide or protein. However, electronic spectroscopies