Regioselectivity of the S_EAr-based cyclizations and S_EAr-terminated annulations of 3,5-unsubstituted, 4-substituted indoles

• Jonali Das and
• Sajal Kumar Das

Beilstein J. Org. Chem. 2022, 18, 293–302, doi:10.3762/bjoc.18.33

• catalysis diazo compound 30 delivered 3,4-fused tricyclic indole derivative 32 which underwent spontaneous rearrangement to thermodynamically more stable naphthalene derivative 33 upon standing for a few hours. To the best of our knowledge, this is the only report of catalyst-controlled C3 versus C5

New efficient synthesis of polysubstituted 3,4-dihydroquinazolines and 4H-3,1-benzothiazines through a Passerini/Staudinger/aza-Wittig/addition/nucleophilic substitution sequence

• Long Zhao,
• Mao-Lin Yang,
• Min Liu and
• Ming-Wu Ding

Beilstein J. Org. Chem. 2022, 18, 286–292, doi:10.3762/bjoc.18.32

• ]. Some 4H-3,1-benzothiazines were prepared by intramolecular thia-Michael addition with broad reaction scopes [19]. The rearrangement of 2-isothiocyano triarylmethanes in the presence of AlCl3 were also used for the synthesis 2,4-diaryl-4H-3,1-benzothiazines through aromatic ring transfer [20]. A facile

Synthesis and late stage modifications of Cyl derivatives

• Phil Servatius and
• Uli Kazmaier

Beilstein J. Org. Chem. 2022, 18, 174–181, doi:10.3762/bjoc.18.19

• Phil Servatius Uli Kazmaier Organic Chemistry, Saarland University, Campus C4.2, 66123 Saarbrücken, Germany 10.3762/bjoc.18.19 Abstract A peptide Claisen rearrangement is used as key step to generate a tetrapeptide with a C-terminal double unsaturated side chain. Activation and cyclization give

• , such as histone deacetylases. Keywords: chelated enolate; Claisen rearrangement; HDAC inhibitor; peptide; late stage modification; Introduction Among natural products, peptidic structures have entered the limelight due to their extraordinary biological activities [1]. Often found as secondary

• decided to take advantage of an asymmetric chelate enolate Claisen rearrangement, which should allow the stereoselective generation of the unusual amino acid, depending on the configuration of the chiral allylic alcohol used [41][42]. If a peptide Claisen rearrangement [43][44][45] is carried out with a

Efficient synthesis of ethyl 2-(oxazolin-2-yl)alkanoates via ethoxycarbonylketene-induced electrophilic ring expansion of aziridines

• Yelong Lei and
• Jiaxi Xu

Beilstein J. Org. Chem. 2022, 18, 70–76, doi:10.3762/bjoc.18.6

• heating, diazo esters 1 undergo a Wolff rearrangement to generate ethoxycarbonylketenes A by loss of nitrogen. The nucleophilic attack of 2-arylaziridine 2 on the ketene moiety produces zwitterionic intermediates B, in which the aziridinium is opened to form the benzylic carbocation stabilized through the

The enzyme mechanism of patchoulol synthase

• Houchao Xu,
• Bernd Goldfuss,
• Gregor Schnakenburg and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2022, 18, 13–24, doi:10.3762/bjoc.18.2

• of an unexpected rearrangement this structural assignment was still erroneous, and the correct structure 3 was finally established by X-ray analysis of its chromic acid diester [6]. The patchoulol synthase (PTS) has been purified from plant leaves and shown to convert farnesyl diphosphate (FPP) into

• deprotonated to 6, followed by another reprotonation to F, cyclisation to G and Wagner–Meerwein rearrangement to D, the same final intermediate as suggested by Croteau. This mechanism was supported by feeding experiments with (4R)-[2-14C,4-3H]mevalonic acid (15) that is converted through IPP and DMAPP into FPP

• migration from C to D in Scheme 1A), and a Wagner–Meerwein rearrangement to G. The final steps are identical to those in Akhila’s mechanism (Scheme 2A). This work also reported on a labelling experiment with (2-2H)FPP that was enzymatically converted with PTS with incorporation of deuterium at C2 of 3

A photochemical C=C cleavage process: toward access to backbone N-formyl peptides

• Haopei Wang and
• Zachary T. Ball

Beilstein J. Org. Chem. 2021, 17, 2932–2938, doi:10.3762/bjoc.17.202

• 4 and 5 are C9 compounds possibly derived from thermal or photochemical rearrangement of compound 3 or another intermediate. The yield of each product was calculated by NMR and verified by isolation (Figure 2). To test the generality of this process with other functional groups, we prepared and

• , affording the heterocycle D, a pathway which should not be base-catalyzed, and thus may be reasonably predominant under appropriate conditions. From heterocycle D, a C–C cleavage would produce the N-formyl product 8 and a re-aromatized C8 heterocyclic byproduct E. Rearrangement to hydroxyindole (F) would

Recent advances in the asymmetric phosphoric acid-catalyzed synthesis of axially chiral compounds

• Alemayehu Gashaw Woldegiorgis and
• Xufeng Lin

Beilstein J. Org. Chem. 2021, 17, 2729–2764, doi:10.3762/bjoc.17.185

• ′-binaphthalenes (BINAMs) from achiral N,N′-binaphthylhydrazines (Scheme 1). In the presence of chiral phosphoric acids (CPA 1), the reaction undergoes a simple [3,3]-sigmatropic rearrangement, giving the corresponding products 2 in good yield (up to 88%) and enantioselectivity (up to 93:7 er). The density

• functional calculations showed that the chiral phosphoric acid proton forms an H-bond with nitrogen atoms of 1 and the phosphate acts as a chiral counterion, resulting in a [3,3]-sigmatropic rearrangement with controlled stereoselectivity [14][41]. In 2017, Tan and co-workers developed an organocatalytic

• type of axially chiral indoles 27 (Scheme 10) bearing aniline groups by direct arylation and rearrangement in moderate to good yields with excellent enantioselectivities of mostly 99% ee (Scheme 9b) [59]. The electronic properties and position of the substituents on the azobenzene ring did not affect

Synthetic strategies toward 1,3-oxathiolane nucleoside analogues

• Umesh P. Aher,
• Dhananjai Srivastava,
• Girij P. Singh and
• Jayashree B. S

Beilstein J. Org. Chem. 2021, 17, 2680–2715, doi:10.3762/bjoc.17.182

• condensation of the sodium salt of methyl 2-mercaptoacetate (3j) with bromoacetaldehyde diethyl acetal (36) in DMF solvent and further oxidation of the sulfide using m-CPBA, followed by Pummerer rearrangement using Ac2O and sodium acetate at 90 °C, which provides compound 37 (Scheme 9). α-Acetoxy sulfide

• ). The other diastereomer 59 remained dissolved in the mother liquor. The treatment of the norephedrine salt 58 with 5 M HCl afforded the enantiopure acid 60, which was further converted to the desired 1,3-oxathiolane-substituted ʟ-menthyl ester 35a. The synthetic use of [1,2]-Brook rearrangement for the

• synthesis of lamivudine (1) and the opposite enantiomer 1a was demonstrated by Han et al. [57]. They carried out the [1,2]-Brook rearrangement of silyl glyoxylate 61 using thiol 3nb as the nucleophile. Under optimized conditions, the reaction of the key intermediate 62 with acetyl chloride in ethanol

α-Ketol and α-iminol rearrangements in synthetic organic and biosynthetic reactions

• Scott Benz and
• Andrew S. Murkin

Beilstein J. Org. Chem. 2021, 17, 2570–2584, doi:10.3762/bjoc.17.172

• , tandem reactions, and the total synthesis and biosynthesis of natural products. This review explores the use of α-ketol rearrangements in these contexts over the past two decades. Keywords: acyloin rearrangement; asymmetric synthesis; iminol rearrangement; ketol rearrangement; tandem reactions

• compounds; or (4) the use of imines (X = NR′′), which lead to more stable α-amino ketones. The α-ketol or α-iminol rearrangement is a synthetic organic tool used for ring expansions and contractions and other isomerizations that is also used in some biological pathways [2][3]. Works featuring these

• catalyst in the presence of a substrate possessing a prochiral migrating group or (2) stereospecifically by means of a chiral α-ketol. As an example of an enantioselective rearrangement, complexes of nickel(II) with a series of chiral 1,2-diaminopropane or pyridineoxazoline ligands were evaluated for their

Synthesis of new substituted 7,12-dihydro-6,12-methanodibenzo[c,f]azocine-5-carboxylic acids containing a tetracyclic tetrahydroisoquinoline core structure

• Agnieszka Grajewska,
• Maria Chrzanowska and
• Wiktoria Adamska

Beilstein J. Org. Chem. 2021, 17, 2511–2519, doi:10.3762/bjoc.17.168

• stereocontrolled [1,2]-Stevens rearrangement of dihydromethanodibenzoazocines. Dihydromethanodibenzoazocines are example of strained, methylene-bridged tetrahydroisoquinolines (Figure 2) that have attracted much interest of scientists not only due to their resemblance to isopavines and thus their medicinal

Direct C(sp³)–H allylation of 2-alkylpyridines with Morita–Baylis–Hillman carbonates via a tandem nucleophilic substitution/aza-Cope rearrangement

• Siyu Wang,
• Lianyou Zheng,
• Shutao Wang,
• Shulin Ning,
• Zhuoqi Zhang and
• Jinbao Xiang

Beilstein J. Org. Chem. 2021, 17, 2505–2510, doi:10.3762/bjoc.17.167

• (sp3)–H allylic alkylation of 2-alkylpyridines with Morita–Baylis–Hillman (MBH) carbonates is described. A plausible mechanism of the reaction might involve a tandem SN2’ type nucleophilic substitution followed by an aza-Cope rearrangement. Various alkyl substituents on 2-alkylpyridines were tolerated

• in the reaction to give the allylation products in 26–91% yields. The developed method provides a straightforward and operational simple strategy for the allylic functionalization of 2-alkypyridine derivatives. Keywords: 2-alkylpyridines; allylic alkylation; aza-Cope rearrangement; catalyst-free

• pyridylic C(sp3)–H bond (Scheme 1b). For examples, Tunge et al. developed a Pd-catalyzed intramolecular decarboxylative coupling of heterocyclic ally esters via a tandem allylation/Cope rearrangement strategy [18]; Hartwig and co-workers reported a stereo-divergent allylic substitution with azaarene

Isolation and characterization of new phenolic siderophores with antimicrobial properties from Pseudomonas sp. UIAU-6B

• Emmanuel T. Oluwabusola,
• Olusoji O. Adebisi,
• Fernando Reyes,
• Kojo S. Acquah,
• Mercedes De La Cruz,
• Larry L. Mweetwa,
• Joy E. Rajakulendran,
• Digby F. Warner,
• Deng Hai,
• Rainer Ebel and
• Marcel Jaspars

Beilstein J. Org. Chem. 2021, 17, 2390–2398, doi:10.3762/bjoc.17.156

• -thioester intermediate followed by dehydration [44]. The incorporation of the decarboxylated phenylalanine by a nucleophilic unit to the intermediate salimethyloxazolinyl-thioester resulted in the formation of compound 5 without a rearrangement to isooxazolidinone owing to lack of N–OH in the phenylalanine

Allylic alcohols and amines by carbenoid eliminative cross-coupling using epoxides or aziridines

• Matthew J. Fleming and
• David M. Hodgson

Beilstein J. Org. Chem. 2021, 17, 2385–2389, doi:10.3762/bjoc.17.155

• . This led to the desired allylic alcohol 6 (38%), likely via the selective (ring strain-relieving) 1,2-metalate rearrangement outlined in Scheme 2 (2→3, X = O, LG = OMe), then preferential β-elimination [7][8] of lithium methoxide rather than dilithium oxide. However, also isolated was dodecanal (50

• as only γ-amino ether 25 was observed in its absence. It was also important to carry out the reaction at −78 °C to avoid a 1,2-Wittig rearrangement of the lithiated benzyl ether [22]; this restricts the reaction to N-Bus-aziridines, as epoxides are not deprotonated by LTMP at such low temperatures

Advances in mercury(II)-salt-mediated cyclization reactions of unsaturated bonds

• Sumana Mandal,
• Raju D. Chaudhari and
• Goutam Biswas

Beilstein J. Org. Chem. 2021, 17, 2348–2376, doi:10.3762/bjoc.17.153

• corresponding methoxyarylalkyne derivative 105 (Scheme 31). In 2005, Ghorai et al. reported the synthesis of a mixture of 6-membered as well as 5-membered heterocyclic compounds through a Hg(II)-salt-promoted unique cyclization–rearrangement reaction [85]. They had performed the HgCl2-promoted cyclization of O

• for the synthesis of 1,4-dihydroquinoline 129 possessing a quaternary carbon center from 128 [93]. The reaction was reported via a seven-membered bicyclic hemiaminal as mentioned in the mechanism. This catalytic rearrangement protocol was successfully applied for the construction of complex carbon

• cyclization of secondary and tertiary l-alkynyl-2,3-epoxyalcohols 131a [94]. This is an example of a Hg(II)-salt-catalyzed rearrangement of 1-alkynyl-2,3-epoxy alcohols to substituted furans. The furan 133a was formed by dehydration of intermediate 132a through the corresponding oxonium cation. When R3 is an

A novel methodology for the efficient synthesis of 3-monohalooxindoles by acidolysis of 3-phosphate-substituted oxindoles with haloid acids

• Li Liu,
• Yue Li,
• Tiao Huang,
• Dulin Kong and
• Mingshu Wu

Beilstein J. Org. Chem. 2021, 17, 2321–2328, doi:10.3762/bjoc.17.150

• . Thus, further work is needed to develop a novel strategy for an efficient synthesis of such a versatile synthon. On the other hand, diethyl (2-oxoindolin-3-yl) phosphates 2 were easily prepared by the base-catalyzed phospha-Brook rearrangement of isatins 1 with diethyl phosphite [28][29]. This compound

• rearrangement under Brønsted base catalysis and the subsequent acidolysis with haloid acids. The mild reaction conditions, simple operation, good yield, and readily available and inexpensive starting materials make this protocol a valuable method for the preparation of various 3-halooxindoles on a large-scale

Constrained thermoresponsive polymers – new insights into fundamentals and applications

• Patricia Flemming,
• Alexander S. Münch,
• Andreas Fery and
• Petra Uhlmann

Beilstein J. Org. Chem. 2021, 17, 2123–2163, doi:10.3762/bjoc.17.138

• state is characterized by the change of the segment distribution from a parabolic to a step profile and a rearrangement of the chain ends [126]. This collapse can be described by the classical Flory–Huggins model. It follows that this vertical collapse above the LCST or below the UCST is merely a

Catalyzed and uncatalyzed procedures for the syntheses of isomeric covalent multi-indolyl hetero non-metallides: an account

• Ranadeep Talukdar

Beilstein J. Org. Chem. 2021, 17, 2102–2122, doi:10.3762/bjoc.17.137

• -hydrogen in the diallylsulfoxide (123) did not allow any Pummerer rearrangement [88][89]. Selenides In 1997, Showalter synthesized bis(indol-2-yl)selanes (or selenides) 130 having potential tyrosine kinase inhibitor activities [90][91]. The synthesis was achieved by reacting diselenium dichloride with (R

Recent advances in the syntheses of anthracene derivatives

• Giovanni S. Baviera and
• Paulo M. Donate

Beilstein J. Org. Chem. 2021, 17, 2028–2050, doi:10.3762/bjoc.17.131

• 3-amino-2-naphthoic acid (97) to a Sandmeyer reaction and obtained 98. Then, a Curtius rearrangement of 98 by using diphenylphosphoryl azide (DPPA) yielded 3-iodonaphthalen-2-amine, that was subjected to a Suzuki cross-coupling with potassium vinyltrifluoroborate resulting in aminostyrene 99. The

• key step was borylative cyclization of precursor 99 and the subsequent treatment with LiAlH4 or MeLi, which resulted in BN anthracene 100a or 100b. On the other hand, the authors obtained BN anthracenes 105a and 105b by oxidation followed by Curtis rearrangement of the commercially available 1,4

Progress and challenges in the synthesis of sequence controlled polysaccharides

• Giulio Fittolani,
• Theodore Tyrikos-Ergas,
• Denisa Vargová,
• Manishkumar A. Chaube and
• Martina Delbianco

Beilstein J. Org. Chem. 2021, 17, 1981–2025, doi:10.3762/bjoc.17.129

Asymmetric organocatalyzed synthesis of coumarin derivatives

• Natália M. Moreira,
• Lorena S. R. Martelli and
• Arlene G. Corrêa

Beilstein J. Org. Chem. 2021, 17, 1952–1980, doi:10.3762/bjoc.17.128

• a high diastereoisomeric control and in most cases with good enantioselectivity of the products. It becomes even more attractive, since it allows an in situ rearrangement of the acyl group that can be used in other functionalization methodologies. However, it presents a limitation relative to the

On the application of 3d metals for C–H activation toward bioactive compounds: The key step for the synthesis of silver bullets

• Renato L. Carvalho,
• Amanda S. de Miranda,
• Mateus P. Nunes,
• Roberto S. Gomes,
• Guilherme A. M. Jardim and
• Eufrânio N. da Silva Júnior

Beilstein J. Org. Chem. 2021, 17, 1849–1938, doi:10.3762/bjoc.17.126

• was then converted to a 5,6-fused seco-prezizaane scaffold through an α-ketol rearrangement promoted by a strong base and after secondary alcohol protection with TBSCl, a Fe-catalyzed C–H activation reaction promoted a second lactonization to afford (+)-pseudoanisatin (Scheme 28B). In 2016, Chirik and

Development of N-F fluorinating agents and their fluorinations: Historical perspective

• Teruo Umemoto,
• Yuhao Yang and
• Gerald B. Hammond

Beilstein J. Org. Chem. 2021, 17, 1752–1813, doi:10.3762/bjoc.17.123

Breaking paracyclophane: the unexpected formation of non-symmetric disubstituted nitro[2.2]metaparacyclophanes

• Suraj Patel,
• Tyson N. Dais,
• Paul G. Plieger and
• Gareth J. Rowlands

Beilstein J. Org. Chem. 2021, 17, 1518–1526, doi:10.3762/bjoc.17.109

• ]metaparacyclophane and a cyclohexadienone cyclophane. Keywords: cyclophane; metaparacyclophane; nitration; paracyclophane; rearrangement; Introduction Cyclophanes have been described as having bent and battered benzene rings [1] due to a structure that involves one, or more, aromatic rings linked by aliphatic

• (2) (31 kcal mol−1 and 13 kcal mol−1, respectively) [33][34]. [2.2]Metaparacyclophane (3) was first isolated by Cram et al., the pioneer of [2.2]cyclophane chemistry, by the acid-catalyzed rearrangement of [2.2]paracyclophane (1) [35][36]. This methodology furnished the non-substituted cyclophane. A

• signal at 5.80 ppm, along with the unusual splitting of the bridgehead protons (H1, 2, 9 and 10) was unlike any [2.2]paracyclophane derivative we had observed. It was clear that we had isolated a cyclophane, but we suspected rearrangement [61][62]. The structure of the other side-product, 6, was even

Total synthesis of ent-pavettamine

• Memory Zimuwandeyi,
• Manuel A. Fernandes,
• Amanda L. Rousseau and
• Moira L. Bode

Beilstein J. Org. Chem. 2021, 17, 1440–1446, doi:10.3762/bjoc.17.99

• compound. Once the crucial 1,3-syn-diol moiety had been obtained, attention shifted to functionalization and differentiation of the terminal carbon atoms for the synthesis of the two C5 fragments. Intermediate 4 was subjected to the Pummerer rearrangement by treatment with TFAA in collidine at 0 °C

Double-headed nucleosides: Synthesis and applications

• Vineet Verma,
• Jyotirmoy Maity,
• Vipin K. Maikhuri,
• Ritika Sharma,
• Himal K. Ganguly and
• Ashok K. Prasad

Beilstein J. Org. Chem. 2021, 17, 1392–1439, doi:10.3762/bjoc.17.98

• between C-2′ and C-4′. The synthesis of the aimed nucleoside 122 started from the nucleoside 119 which in turn was synthesized from uridine in six steps following a literature procedure [68]. The olefinic nucleoside 119 was subjected to a RhCl3-mediated allyl rearrangement to give nucleoside 120 as a