Polarity effects in 4-fluoro- and 4-(trifluoromethyl)prolines

• Vladimir Kubyshkin

Beilstein J. Org. Chem. 2020, 16, 1837–1852, doi:10.3762/bjoc.16.151

• fluorination usually increases polarity of a molecule due the newly introduced polar C–F bond. A CF3 group introduces a dipole of a similar size (see Figure 2), however, due to its high molar volume it increases the hydrophobicity of a molecule [75]. The overall outcome may appear paradoxical: a CF3 group can

• diastereomers exhibited some differences. The cis-diastereomer 1 with the C–F bond pointing in the same direction as the carboxymethyl group, appeared more polar compared to the trans-isomer 2, where the direction was opposite (ΔlogPcis/trans ≈ −0.18). The same effect was observed in 4-hydroxyprolines as well

Pauson–Khand reaction of fluorinated compounds

• Jorge Escorihuela,
• Daniel M. Sedgwick,
• Alberto Llobat,
• Mercedes Medio-Simón,
• Pablo Barrio and
• Santos Fustero

Beilstein J. Org. Chem. 2020, 16, 1662–1682, doi:10.3762/bjoc.16.138

• substituents, electron-neutral and electron-rich rings with several substitution patterns performed well. However, pyridine-based 48j resulted in a low yield. Noteworthy, the PKR of chiral enynes 48 led to a bridgehead quaternary stereocenter containing a C–F bond in a single step. Besides the intrinsic

Fluorohydration of alkynes via I(I)/I(III) catalysis

• Jessica Neufeld,
• Constantin G. Daniliuc and
• Ryan Gilmour

Beilstein J. Org. Chem. 2020, 16, 1627–1635, doi:10.3762/bjoc.16.135

• established by single crystal X-ray diffraction (Figure 2). Interestingly, a study by Pattison has established that α-fluoroketones preferentially adopt a cis-conformation in polar solvents [54]. In the solid state, a dihedral angle of φ = −3.7° was observed thereby placing the C–F bond in the same plane as

Synthesis of organic liquid crystals containing selectively fluorinated cyclopropanes

• Zeguo Fang,
• Nawaf Al-Maharik,
• Peer Kirsch,
• Matthias Bremer,
• Alexandra M. Z. Slawin and
• David O’Hagan

Beilstein J. Org. Chem. 2020, 16, 674–680, doi:10.3762/bjoc.16.65

• vertical alignment (VA) LCD technology, liquid crystals with negative dielectric anisotropy are required [3]. Fluorine, as the most electronegative atom, forms stable bonds to carbon and can thus induce polarity. It is also attractive as a design feature due to the low polarizability of the C–F bond

• dielectric anisotropy by introducing the C–F bond or the dipole of a CF2 group either parallel or perpendicular to the long molecular axis. For example, in the area of negative liquid crystalline materials, Kirsch et al. have reported the synthesis of bicyclohexane and bis(cyclohexyl)ethane liquid crystals

• difluorocarbene addition to alpha-fluorostyrenes [13]. This used the extraordinary useful method for the generation of difluorocarbene from the Ruppert–Prakash (TMSCF3) reagent [14]. DFT analysis suggests the lowest energy conformer of aryl α,β,β-trifluorocyclopropane 7 orients the C–F bond perpendicular to the

Synthesis, liquid crystalline behaviour and structure–property relationships of 1,3-bis(5-substituted-1,3,4-oxadiazol-2-yl)benzenes

• Afef Mabrouki,
• Malek Fouzai,
• Armand Soldera,
• Abdelkader Kriaa and
• Ahmed Hedhli

Beilstein J. Org. Chem. 2020, 16, 149–158, doi:10.3762/bjoc.16.17

• in organic chemistry [3]. The C–F bond is highly polarized and this polarity inhibits the lone pair donation from fluorine, making this element a weak coordinator. These properties are the basis for the unique properties of perfluoroalkylated compounds such as high viscosity, high density, high

• -plane zigzag conformation [36]. Fluorine is the most electronegative element of the periodic table. This high electronegativity confers to C–F bond a large dipole moment of 1.39 D while that of C–H bond is only 0.40 D [37]. Owing to the all-trans conformation, the local dipole moments Cδ−–Hδ+ of

Recent advances in transition-metal-catalyzed incorporation of fluorine-containing groups

• Xiaowei Li,
• Xiaolin Shi,
• Xiangqian Li and
• Dayong Shi

Beilstein J. Org. Chem. 2019, 15, 2213–2270, doi:10.3762/bjoc.15.218

• aryl fluorides [23][32]. Allylic fluorination: In 2010, Doyle and co-worker [35] developed a strategy for C–F bond formation of readily available cyclic allylic chlorides and AgF using a Pd(0) catalyst in combination with Trost’s bisphosphine ligand at room temperature (Scheme 2a). They also proved

• has been proposed. First, a bis(terpyridyl)Pd(II) complex B is oxidized by Selectfluor with turnover-limiting to obtain Pd(III) C and a Selectfluor radical cation. Then, a transfer of a F· radical from the Selectfluor radical cation to an aryl trifluoroborate occurs, forming the C−F bond and producing

• Cu-catalyzed fluorination of 2-pyridylaryl bromides was achieved by Liu and co-workers [80] through a Cu(I/III) catalytic cycle as well (Scheme 36). This method is based on the aid of an important pyridyl directing group and the final aryl C–F bond is formed after the reductive elimination of ArCu

One hundred years of benzotropone chemistry

• Arif Dastan,
• Haydar Kilic and
• Nurullah Saracoglu

Beilstein J. Org. Chem. 2018, 14, 1120–1180, doi:10.3762/bjoc.14.98

Stereochemical outcomes of C–F activation reactions of benzyl fluoride

• Neil S. Keddie,
• Pier Alexandre Champagne,
• Justine Desroches,
• Jean-François Paquin and
• David O'Hagan

Beilstein J. Org. Chem. 2018, 14, 106–113, doi:10.3762/bjoc.14.6

• , Université Laval, Québec, QC G1V 0A6, Canada 10.3762/bjoc.14.6 Abstract In recent years, the highly polar C–F bond has been utilised in activation chemistry despite its low reactivity to traditional nucleophiles, when compared to other C–X halogen bonds. Paquin’s group has reported extensive studies on the

• demonstrated that both associative and dissociative pathways operate to varying degrees, according to the nature of the nucleophile and the hydrogen bond donor. Keywords: benzylic fluorides; C–F activation; chiral liquid crystal; 2H NMR; PBLG; stereochemistry; Introduction The C–F bond is the strongest

• years, there has been an increasing interest in C–F bond activation [2], with a view to using organic bound fluoride as a leaving group in substitution reactions that typically require more activated leaving groups. Such an approach could circumvent the requirement for protecting groups in multistep

Conformational preferences of α-fluoroketones may influence their reactivity

• Graham Pattison

Beilstein J. Org. Chem. 2017, 13, 2915–2921, doi:10.3762/bjoc.13.284

• preferred for α-fluoroacetophenone, which places the C–F bond in the same plane as the C=O bond, making orbital interactions impossible. Although orbital interactions between chlorine’s lone pairs and the C=O π* orbital are expected to be weak, at least α-chloroacetophenone has a lowest energy gauche

• lone pairs and the filled C=O π-orbital. The higher polarizability of higher halogens such as chlorine and bromine may be able to reduce this repulsion, however, the tightly held, non-polarizable lone pairs of fluorine are likely to experience this repulsive effect most strongly. The shorter C–F bond

Recent progress in the racemic and enantioselective synthesis of monofluoroalkene-based dipeptide isosteres

• Myriam Drouin and
• Jean-François Paquin

Beilstein J. Org. Chem. 2017, 13, 2637–2658, doi:10.3762/bjoc.13.262

• negative charge, with a dipole moment of 1.4 D. Finally, the monofluoroalkene has the ability to accept a hydrogen bond through the fluorine atom [9]. Geometrically, the monofluoroalkene is quite similar to the amide bond. The C=O bond of the amide is 1.228 Å, compared to 1.376 Å for the C–F bond, and the

• bond isostere [6]. Using this strategy, a mutant tripeptide containing two different peptide bond isosteres could be synthesized (Figure 3). In 2016, Konno and co-workers developed a stereoselective chromium-mediated C–F bond cleavage followed by a C–C bond formation to access (Z)-monofluoroalkenes

Hydrolysis, polarity, and conformational impact of C-terminal partially fluorinated ethyl esters in peptide models

• Vladimir Kubyshkin and
• Nediljko Budisa

Beilstein J. Org. Chem. 2017, 13, 2442–2457, doi:10.3762/bjoc.13.241

• resulting partition is illustrated in Figure 3. In accordance with previous observations, the logP values exhibit the checkmark-shape: the lipophilicity decreased with the introduction of the first polar C–F bond, and with the introduction of subsequent fluorine atoms, the lipophilicity increased due to the

Homologated amino acids with three vicinal fluorines positioned along the backbone: development of a stereoselective synthesis

• Raju Cheerlavancha,
• Ahmed Ahmed,
• Yun Cheuk Leung,
• Aggie Lawer,
• Qing-Quan Liu,
• Marina Cagnes,
• Hee-Chan Jang,
• Xiang-Guo Hu and
• Luke Hunter

Beilstein J. Org. Chem. 2017, 13, 2316–2325, doi:10.3762/bjoc.13.228

• configurations that can affect the conformation. Organofluorine chemistry offers a particular attraction here, since fluorinated molecules (e.g., 3–5) tend to adopt predictable conformations due to hyperconjugative and/or dipole–dipole interactions associated with the C–F bond [11][12][13][14][15]. Such a

Conformational impact of structural modifications in 2-fluorocyclohexanone

• Francisco A. Martins,
• Josué M. Silla and
• Matheus P. Freitas

Beilstein J. Org. Chem. 2017, 13, 1781–1787, doi:10.3762/bjoc.13.172

• -fluorocyclohexanone; hyperconjugation; Introduction Organofluorine compounds are of special interest in materials, pharmaceutical and agricultural sciences, as the C–F bond is the most polar bond in organic chemistry, which can be useful in the design of performance organic molecules [1]. A fluorine substituent in

• such hyperconjugative interactions and therefore often give way to the C–H bond in occupying the antiperiplanar orientation relative to the C–F bond [2][3][4][5][6]. The electrostatic fluorine gauche effect has also been introduced in cases where the partially negative fluorine interacts with a

• between the fluorine atom (or the C–F bond) and the Y group (or the C=Y bond), which has been well described by a spatial/dipolar interaction between these groups, despite a minor contribution from hyperconjugation. Thus, the fluorine Perlin-like effect shown in Table 4 supports our conclusions that

Fluorinated cyclohexanes: Synthesis of amine building blocks of the all-cis 2,3,5,6-tetrafluorocyclohexylamine motif

• Tetiana Bykova,
• Nawaf Al-Maharik,
• Alexandra M. Z. Slawin and
• David O'Hagan

Beilstein J. Org. Chem. 2017, 13, 728–733, doi:10.3762/bjoc.13.72

• (Figure 1) [1][2][3]. The cyclohexane ring has four C–F bonds on one face, two of which are aligned 1,3-diaxial. Due to the particularly polar nature of the C–F bond, the alignment of those two bonds results in a large molecular dipole moment [4][5][6]. For the parent cyclohexane ring 1 the magnitude of

Organofluorine chemistry: Difluoromethylene motifs spaced 1,3 to each other imparts facial polarity to a cyclohexane ring

• Mathew J. Jones,
• Ricardo Callejo,
• Alexandra M. Z. Slawin,
• Michael Bühl and
• David O'Hagan

Beilstein J. Org. Chem. 2016, 12, 2823–2827, doi:10.3762/bjoc.12.281

• each other in a cyclohexane ring is introduced as a new design strategy which could be applicable to the preparation of polar hydrophobic cyclohexane motifs. Keywords: aliphatic rings; C–F bond; cyclohexane conformation; difluoromethylene group; organofluorine chemistry; Introduction Selective

• incorporation of fluorine atoms is a powerful strategy for modulating the properties of organic compounds [1][2][3]. For instance, the replacement of hydrogen by fluorine is commonly practised in medicinal [4][5] and agrochemical [6][7] research programmes. The dipole moment associated with the C–F bond has

Ring-whizzing in polyene-PtL₂ complexes revisited

• Oluwakemi A. Oloba-Whenu,
• Thomas A. Albright and
• Chirine Soubra-Ghaoui

Beilstein J. Org. Chem. 2016, 12, 1410–1420, doi:10.3762/bjoc.12.135

• agreement with each other. Benzene–Ni(PR3)2 compounds have been known for some time [41]. An η2 geometry has been observed to be the precursor to C–F bond insertion for F6C6 complexes [42] and a number of theoretical studies have been carried out [43][44][45][46] which address this reaction. There are two

Copper-promoted hydration and annulation of 2-fluorophenylacetylene derivatives: from alkynes to benzo[b]furans and benzo[b]thiophenes

• Yibiao Li,
• Liang Cheng,
• Xiaohang Liu,
• Bin Li and
• Ning Sun

Beilstein J. Org. Chem. 2014, 10, 2886–2891, doi:10.3762/bjoc.10.305

• reaction and its application in the synthesis of benzo[b]furan and benzo[b]thiophene derivatives is presented starting from readily available 2-fluorophenylacetylene derivatives. The key annulation step involves the hydration of the C–F bond of 2-fluorophenylacetylene derivatives followed by an

Synthesis of 2-trifluoromethylpyrazolo[5,1-a]isoquinolines via silver triflate-catalyzed or electrophile-mediated one-pot tandem reaction

• Xiaoli Zhou,
• Meiling Liu,
• Puying Luo,
• Yingjun Lai,
• Tangtao Yang and
• Qiuping Ding

Beilstein J. Org. Chem. 2014, 10, 2286–2292, doi:10.3762/bjoc.10.238

• fluorine atoms because of the strong electronegativity, the small size, the strength of the C–F bond, and the low polarizability of the fluorine atom. Statistically, more than 20% of the pharmaceuticals and 40% of the agrochemicals contain one or more fluorine atoms. Thus, there has been considerable

Visible light photoredox-catalyzed deoxygenation of alcohols

• Daniel Rackl,
• Viktor Kais,
• Peter Kreitmeier and
• Oliver Reiser

Beilstein J. Org. Chem. 2014, 10, 2157–2165, doi:10.3762/bjoc.10.223

• developed is limited to benzylic, α-carbonyl, and α-cyanoalcohols; with other alcohols a slow partial C–F bond reduction in the 3,5-bis(trifluoromethyl)benzoate moiety occurs. Keywords: C–O bond activation; deoxygenation; photochemistry; photoredox catalysis; visible light; Introduction The dwindling

The difluoromethylene (CF₂) group in aliphatic chains: Synthesis and conformational preference of palmitic acids and nonadecane containing CF₂ groups

• Yi Wang,
• Ricardo Callejo,
• Alexandra M. Z. Slawin and
• David O’Hagan

Beilstein J. Org. Chem. 2014, 10, 18–25, doi:10.3762/bjoc.10.4

• between those H(1)···H(4) interactions relative to those with CH2 at the corner. Also if the CF2 locates at an edge this would require that a C–F bond project into the middle of the ring. The larger steric influence of the fluorine, projecting into the tightly packed arrangement of endo orientated

Stereoselectively fluorinated N-heterocycles: a brief survey

• Xiang-Guo Hu and
• Luke Hunter

Beilstein J. Org. Chem. 2013, 9, 2696–2708, doi:10.3762/bjoc.9.306

• highly-polarised C–F bond is incorporated into a nitrogen heterocycle, it can be expected to have a dramatic influence on the molecules’ physical and chemical properties [14]. The influence that fluorine can have on chemical reactivity is illustrated by considering the smallest N-heterocycles, the

• illustrates a strategy for achieving stereoselectivity in C–F bond formation. The racemic β-lactam 4b was synthesised as a single diastereoisomer from the Schiff base 79 (Scheme 11), by a Reformatsky addition followed by spontaneous cyclisation; removal of the amine protecting group under oxidative conditions

Triol-promoted activation of C–F bonds: Amination of benzylic fluorides under highly concentrated conditions mediated by 1,1,1-tris(hydroxymethyl)propane

• Pier Alexandre Champagne,
• Alexandre Saint-Martin,
• Mélina Drouin and
• Jean-François Paquin

Beilstein J. Org. Chem. 2013, 9, 2451–2456, doi:10.3762/bjoc.9.283

• C–F bond of benzylic fluorides was achieved using 1,1,1-tris(hydroxymethyl)propane (2) as a hydrogen bond-donating agent. Investigations demonstrated that hydrogen bond-donating solvents are promoting the activation and hydrogen bond-accepting ones are hindering it. However, the reaction is best run

• under highly concentrated conditions, where solvents cannot interfere with the interaction between the organofluorine compound and the triol. Various benzylic fluorides react with secondary amines or anilines to form benzylic amines in good yields. Keywords: C–F bond activation; highly concentrated

• ). Conclusion In summary, we have described that according to our previous proposed mechanism for the hydrogen bond-promoted C–F bond activation [17], simultaneous coordination of the three lone pairs of fluorine by a triol (e.g. 2) permits the nucleophilic substitution of benzylic fluorides by amines under

Synthesis of enantiomerically pure (2S,3S)-5,5,5-trifluoroisoleucine and (2R,3S)-5,5,5-trifluoro-allo-isoleucine

• Holger Erdbrink,
• Elisabeth K. Nyakatura,
• Susanne Huhmann,
• Ulla I. M. Gerling,
• Dieter Lentz,
• Beate Koksch and
• Constantin Czekelius

Beilstein J. Org. Chem. 2013, 9, 2009–2014, doi:10.3762/bjoc.9.236

• findings, suggests that there are two factors determining the overall hydrophobicity of fluorinated amino acids [26]. On one hand, substitutions of hydrogen by fluorine increase the solvent accessible surface area and thus lead to an increase in hydration energy. On the other hand, the C–F bond is more

Asymmetric allylic alkylation of Morita–Baylis–Hillman carbonates with α-fluoro-β-keto esters

• Lin Yan,
• Zhiqiang Han,
• Bo Zhu,
• Caiyun Yang,
• Choon-Hong Tan and
• Zhiyong Jiang

Beilstein J. Org. Chem. 2013, 9, 1853–1857, doi:10.3762/bjoc.9.216

• ). Keywords: allylic alkylation; asymmetric catalysis; fluorine; fluoro-β-keto esters; Morita–Baylis–Hillman carbonates; natural product; Introduction Fluorine is the most electronegative element in the periodic table, resulting in a highly polar C–F bond. This gives fluoro-organic compounds unique

Utilizing the σ-complex stability for quantifying reactivity in nucleophilic substitution of aromatic fluorides

• Magnus Liljenberg,
• Tore Brinck,
• Tobias Rein and
• Mats Svensson

Beilstein J. Org. Chem. 2013, 9, 791–799, doi:10.3762/bjoc.9.90

• PCM water solvation are depicted in Figure 5. All three structures are very similar, and the main difference between the σ-complex and TS2 is a slight elongation of less than 0.1 Å of the breaking C–F bond in TS2. An IRC-calculation showed that F leaves as F− without the assistance of explicit

• of the diffuse functions the energy of TS1 relative to the σ-complex is decreased to 0.13 kcal/mol and the energy of TS2 is increased to 6.5 kcal/mol. Consistent with the picture that diffuse functions are needed to describe the negative charge formed at the fluorine, the C–F bond is much longer