Thiazolidinones: novel insights from microwave synthesis, computational studies, and potentially bioactive hybrids

• Luan A. Martinho,
• Victor H. J. G. Praciano,
• Guilherme D. R. Matos,
• Claudia C. Gatto and
• Carlos Kleber Z. Andrade

Beilstein J. Org. Chem. 2025, 21, 2618–2636, doi:10.3762/bjoc.21.203

• available drugs [1]. These structures exhibit unique properties that influence pharmacokinetic and pharmacodynamic parameters, including lipophilicity, polarity, hydrogen-bonding capacity, and toxicological profiles [2][3][4]. Among them, five-membered multi-heterocyclic (FMMH) rings are privileged

• through intramolecular hydrogen bonding. By comparing the data for λabs and λem, it is evident that the compounds exhibit significant Stokes shifts with values above 2,100 cm−1, reflecting their stability in the excited state [87][88][89]. The highest values of Stokes shifts were observed in polar protic

Efficient solid-phase synthesis and structural characterization of segetalins A–H, J and K

• Liangyu Liu,
• Wanqiu Lu,
• Quanping Guo and
• Zhaoqing Xu

Beilstein J. Org. Chem. 2025, 21, 2612–2617, doi:10.3762/bjoc.21.202

• –220 nm and a maximum below 200 nm. CD spectroscopy revealed that cyclic topology shifts characteristic peaks and stabilizes secondary structures through cooperative ring size/sequence/solvent effects [30]. TFE disrupts the hydrogen-bonding network of water, reduces solvent polarity, and enhances the

Visible-light-driven NHC and organophotoredox dual catalysis for the synthesis of carbonyl compounds

• Vasudevan Dhayalan

Beilstein J. Org. Chem. 2025, 21, 2584–2603, doi:10.3762/bjoc.21.200

• process, such as being environmentally friendly, offering operational simplicity, lower cost, and easy availability, reducing waste and toxicity, as well as providing excellent chemo-, regio-, and enantioselectivity through fine-tuned hydrogen bonding or covalent activation modes. Furthermore, the

Isoorotamide-based peptide nucleic acid nucleobases with extended linkers aimed at distal base recognition of adenosine in double helical RNA

• Grant D. Walby,
• Brandon R. Tessier,
• Tristan L. Mabee,
• Jennah M. Hoke,
• Hallie M. Bleam,
• Angelina Giglio-Tos,
• Emily E. Harding,
• Vladislavs Baskevics,
• Martins Katkevics,
• Eriks Rozners and
• James A. MacKay

Beilstein J. Org. Chem. 2025, 21, 2513–2523, doi:10.3762/bjoc.21.193

• possible base pairs (G–C, A–U, C–G, and U–A). Notably, each synthetic nucleobase takes advantage of favorable hydrogen bonding interactions to the proximal nucleobase in the Watson–Crick base pair. Strong binding has been reported for purine recognition given the propensity for two Hoogsteen hydrogen bonds

• single hydrogen bond [29][30]. In efforts toward improving pyrimidine recognition, several groups have explored PNA nucleobase monomers using extended nucleobases to utilize maximum hydrogen bonding interactions across the Hoogsteen face of the Watson–Crick base pair [13][15]. Notable examples of the PNA

• recognize U–A without formally hydrogen-bonding to U. This distal base recognition approach utilized design elements of our previous Io series [35][36], particularly Io5 chosen for its synthetic simplicity and the ability to further functionalize the aromatic phenyl group. Three new nucleobases, Db1, Db2

Catalytic enantioselective synthesis of selenium-containing atropisomers via C–Se bond formations

• Qi-Sen Gao,
• Zheng-Wei Wei and
• Zhi-Min Chen

Beilstein J. Org. Chem. 2025, 21, 2447–2455, doi:10.3762/bjoc.21.186

• .1 initially engages substrate 7 through hydrogen bonding, forming intermediate Int 7. Subsequently, deprotonation of the naphthol group by quinuclidine yields intermediate Int 8. This intermediate then undergoes nucleophilic attack on the selenium atom in substrate 8, leading to the formation of the

• (Scheme 4). In 2025, Yang, Lu, and co-workers employed bifunctional catalysts, including chiral thiourea derivatives or chiral phosphoric acid, to activate alkynes and selenols through multiple hydrogen-bonding interactions, thereby achieving an enantioselective hydroselenation of alkynes [22]. All

The high potential of methyl laurate as a recyclable competitor to conventional toxic solvents in [3 + 2] cycloaddition reactions

• Ayhan Yıldırım and
• Mustafa Göker

Beilstein J. Org. Chem. 2025, 21, 2389–2415, doi:10.3762/bjoc.21.184

• but not limited to methyl laurate, has found application in a variety of direct and indirect food additive applications [94]. The Hansen solubility parameter is a numerical expression that quantifies a molecule's cohesive energy density from non-polar, polar, and hydrogen-bonding interactions. It is a

• space is shown in Figure 8a. The distribution of these selected solvents with other organic solvents in the 3D Hansen solubility space is determined by three Hansen solubility parameters (HSPs): dispersion (δD), polarity (δP), and hydrogen bonding (δH). As is well established, information about their

• potential hazard associated with their utilization as a solvent in the aforementioned reactions. For the solute component C,N-diphenylnitrone, the dispersion, polarity, and hydrogen bonding values for nitrone were determined as δD = 16.6, δP = 7.6 and δH = 8.7. Figure 8b clearly shows the position of the

Conformational effects on iodide binding: a comparative study of flexible and rigid carbazole macrocyclic analogs

• Guang-Wei Zhang,
• Yong Zhang,
• Le Shi,
• Chuang Gao,
• Hong-Yu Li and
• Lei Xue

Beilstein J. Org. Chem. 2025, 21, 2369–2375, doi:10.3762/bjoc.21.181

• mechanism, while rigid WDGs are limited by the preorganization effect and can only achieve weak hydrogen bonding through conformational selection. In addition, the changes in the chemical shifts of the above two structures lead us to believe that the two structural analogs undergo conformational changes

Rotaxanes with integrated photoswitches: design principles, functional behavior, and emerging applications

• Jullyane Emi Matsushima,
• Khushbu,
• Zuliah Abdulsalam,
• Udyogi Navodya Kulathilaka Conthagamage and
• Víctor García-López

Beilstein J. Org. Chem. 2025, 21, 2345–2366, doi:10.3762/bjoc.21.179

• –guest interaction induces a chiral signal, while the azobenzene chromophore imparts photoswitching properties to the molecule. Furthermore, solvent-mediated hydrogen-bonding interactions tailored within the inner cyclodextrin cavity, combined with photocontrolled isomerization of the azo moiety, enable

• form selective hydrogen bonds between the carbonyl oxygen of the fumaramide unit and the N–H groups of benzylic amide rings. Upon isomerization to the cis isomer, the hydrogen-bonding interactions are weakened, enabling the macrocycle to migrate to a second recognition station [61]. Despite their

• site, enabling precise control over molecular motion [71]. The incorporation of pyridyl-acyl hydrazone units is demonstrated to enable high binding (>95%) and reversible macrocycle shuttling between two binding sites (98%). Moreover, structural analysis revealed distinct intercomponent hydrogen-bonding

Enantioselective radical chemistry: a bright future ahead

• Anna C. Renner,
• Sagar S. Thorat,
• Hariharaputhiran Subramanian and
• Mukund P. Sibi

Beilstein J. Org. Chem. 2025, 21, 2283–2296, doi:10.3762/bjoc.21.174

• , transition-metal catalysis, and enzyme catalysis. Progress in enantioselective reactions using these approaches is discussed with the help of one or two examples in each category to highlight the outstanding achievements in the past three decades. Other modes of catalysis relying on hydrogen-bonding [13][14

• current limitations in the scope and capabilities of enantioselective radical chemistry. The existing literature features a predominant use of nucleophilic radicals, a small number of H-atom donors, and limited application of hydrogen-bonding catalysis in radical reactions. Further studies on

• enantioselective transformations of electrophilic radicals, alternative H-atom sources, and additional modes of catalysis (including hydrogen-bonding catalysis) would be valuable. Additionally, the development of more efficient methods, using lower catalyst loadings, remains an important goal for ongoing research

C2 to C6 biobased carbonyl platforms for fine chemistry

• Jingjing Jiang,
• Muhammad Noman Haider Tariq,
• Florence Popowycz,
• Yanlong Gu and
• Yves Queneau

Beilstein J. Org. Chem. 2025, 21, 2103–2172, doi:10.3762/bjoc.21.165

• synthesize photoluminescence-active polyamides from renewable furfural and 2,5-furandicarboxylic acid with diamine and isocyanide (Scheme 62). The intramolecular hydrogen bonding between the secondary amide and furan oxygen atom promote the strong fluorescence of the polyamides. These furfural-based

Solar thermal fuels: azobenzene as a cyclic photon–heat transduction platform

• Jie Yan,
• Shaodong Sun,
• Minghao Wang and
• Si Wu

Beilstein J. Org. Chem. 2025, 21, 2036–2047, doi:10.3762/bjoc.21.159

• investigated their solar thermal energy storage performance [46]. Key parameters governing the performance of azobenzene–RGO hybrid solar thermal fuels include hydrogen-bonding interactions, intermolecular distances between adjacent azobenzene groups, and electronic coupling effects. Conjugated azobenzene

Chiral phosphoric acid-catalyzed asymmetric synthesis of helically chiral, planarly chiral and inherently chiral molecules

• Wei Liu and
• Xiaoyu Yang

Beilstein J. Org. Chem. 2025, 21, 1864–1889, doi:10.3762/bjoc.21.145

• ortho-positions. The dual hydrogen-bonding interactions were critical for this reaction, ensuring that the reaction proceeded within the chiral pocket of the CPA catalyst. Moreover, the authors proposed that the extended π-substituents at the ortho-positions of CPA could engage in π–π-stacking

• CPA-catalyzed cyclization of INT-E through the dual hydrogen bonding activation transition state TS-1 afforded the eight-membered heterocycle INT-F with a stereogenic center. Through the elimination of aniline 73, the saddle-shaped dibenzo[1,5]diazocine 72 was produced via a central-to-inherent

• chirality transfer process. Notably, while only the amino group of the co-catalysts was shown to engage in the catalytic cycle, the 2-acyl group of 73 was believed to participate in hydrogen bonding interactions with the substrate and the CPA catalyst, playing additional crucial roles. In addition to

Systematic pore lipophilization to enhance the efficiency of an amine-based MOF catalyst in the solvent-free Knoevenagel reaction

• Pricilla Matseketsa,
• Margret Kumbirayi Ruwimbo Pagare and
• Tendai Gadzikwa

Beilstein J. Org. Chem. 2025, 21, 1854–1863, doi:10.3762/bjoc.21.144

• enhance covalent and/or acid–base catalysis via any combination of non-covalent interactions (hydrogen bonding, π–π stacking, lipophilic interactions, etc) [4][5][6]. Inspired by enzymes, Nature's most efficient catalysts, chemists have long endeavored to synthesize catalytic materials in which multiple

• -inspired materials, PSM allows us to incorporate functionalities that are pertinent to catalysis but that would normally interfere with MOF assembly, e.g. hydrogen bonding groups like –OH and –COOH that are difficult to obtain as free uncoordinated moieties within MOF pores [28][29]. Given these benefits

Photoswitches beyond azobenzene: a beginner’s guide

• Michela Marcon,
• Christoph Haag and
• Burkhard König

Beilstein J. Org. Chem. 2025, 21, 1808–1853, doi:10.3762/bjoc.21.143

• interesting results: in the case of derivative 63 containing pyrrole, capable of hydrogen bonding with the carbonyl oxygen (Scheme 20, left) [61][62], the E form is obtained almost quantitatively upon irradiation. In the case of pyridine-containing derivative 64 (Scheme 20, right) no photoswitching is

Research progress on calixarene/pillararene-based controlled drug release systems

• Liu-Huan Yi,
• Jian Qin,
• Si-Ran Lu,
• Liu-Pan Yang,
• Li-Li Wang and
• Huan Yao

Beilstein J. Org. Chem. 2025, 21, 1757–1785, doi:10.3762/bjoc.21.139

• . Supramolecular chemistry, with molecular recognition at its core [17], utilizes non-covalent interactions such as electrostatic interactions, hydrogen bonding [18], and hydrophobic effects to provide valuable tools for developing new biomaterials and drug delivery systems [18][19][20][21][22]. This article

• action of hydrophobic interactions and hydrogen bonding. Under physiological pH conditions (7.0–7.6), the CA8-CPF complex self-assembles into a stable multilayer structure through electrostatic interactions. When the environmental pH deviates from the neutral range (pH < 6.0 or pH > 8.0), the charge

• [52]. The key design features are: 1) The mannose groups at the upper rim confer specific recognition ability for cancer cell surface receptors; 2) The hydrophobic core formed by the alkyl chains at the lower rim and the hydrogen-bonding network constructed by the thiourea unit can efficiently

Unique halogen–π association detected in single crystals of C–N atropisomeric N-(2-halophenyl)quinolin-2-one derivatives and the thione analogue

• Mai Uchibori,
• Nanami Murate,
• Kanako Shima,
• Tatsunori Sakagami,
• Ko Kanehisa,
• Gary James Richards,
• Akiko Hori and
• Osamu Kitagawa

Beilstein J. Org. Chem. 2025, 21, 1748–1756, doi:10.3762/bjoc.21.138

• interaction as an alternative to hydrogen bonding and has been widely used as an important supramolecular tool in broad fields such as materials science, crystal engineering, liquid crystals, synthetic organic chemistry and medicinal chemistry [22][23][24][25][26]. Typically, halogen bonding has been

Thermodynamics and polarity-driven properties of fluorinated cyclopropanes

• Matheus P. Freitas

Beilstein J. Org. Chem. 2025, 21, 1742–1747, doi:10.3762/bjoc.21.137

• 2.70 Å, this interaction is consistent with electrostatic hydrogen bonding. Consequently, similar to the behavior observed in the crystalline form of all-cis-1,2,3,4,5,6-hexafluorocyclohexane [10], 1.2.3-c.c. is expected to self-assemble in the condensed phase. Given the "Janus"-face-like structure of

• , such as stacking, electrostatic hydrogen bonding, and complexation with ions. The interplay of steric effects, dipolar repulsion, and electron delocalization emerged as critical factors in governing the stability of isomeric fluorinated cyclopropanes. These findings not only deepen the understanding of

Approaches to stereoselective 1,1'-glycosylation

• Daniele Zucchetta and
• Alla Zamyatina

Beilstein J. Org. Chem. 2025, 21, 1700–1718, doi:10.3762/bjoc.21.133

• selectivity in glycosylations with various types of nucleophiles [67][68]. This remarkable stereoselectivity has been attributed to intermolecular hydrogen bonding, which forms a transient tether between the glycosyl donor and acceptor, thereby guiding the reaction towards a preferred stereochemical outcome

Structural analysis of stereoselective galactose pyruvylation toward the synthesis of bacterial capsular polysaccharides

• Tsun-Yi Chiang,
• Mei-Huei Lin,
• Chun-Wei Chang,
• Jinq-Chyi Lee and
• Cheng-Chung Wang

Beilstein J. Org. Chem. 2025, 21, 1671–1677, doi:10.3762/bjoc.21.131

• In conclusion, we could successfully synthesize the pure R-isomer of pyruvated galactose, simultaneously avoiding anomeric epimerization. The crystal structure of pyruvylated galactose, potentially stabilized by hydrogen bonding, provided direct evidence confirming the diastereochemistry of the

• ), 1.15 EPS (2) and Rhizobium leguminosarum bv. viciae VF39 EPS (3). (a) Oak Ridge Thermal Ellipsoid Plot view of the X-ray crystal structure of pyruvylated galactose 6. (b) Hydrogen-bonding in the crystal structure of pyruvylated galactose 6. Synthesis of trisaccharide precursor 14. Optimization of

Catalytic asymmetric reactions of isocyanides for constructing non-central chirality

• Jia-Yu Liao

Beilstein J. Org. Chem. 2025, 21, 1648–1660, doi:10.3762/bjoc.21.129

• is worth noting that the presence of a hydrogen bonding donor in 27 is crucial for achieving high enantioselectivity. As shown, while replacing the OH with NHMe led to a slight decrease of ee (28c versus 28b), the protection of the OH with methyl caused a severe drop (28d versus 28b). The application

• condensation between 27 and the aldehyde afforded INT-A, which was activated by the CPA catalyst through hydrogen bonding interaction. The nucleophilic addition of isocyanide to Int-A produced INT-B bearing a stereogenic center. Subsequently, INT-B underwent intramolecular cyclization to generate axially

• explanations for such a diastereodivergence. Specifically, L9 functions as a monodentate ligand, and the stronger ligand–substrate hydrogen-bonding interaction and smaller distortion of the ligand resulted in endo-cycloadducts (L9-TS). In contrast, Trost ligand L10 serves as a bidentate ligand, and the smaller

Azobenzene protonation as a tool for temperature sensing

• Antti Siiskonen,
• Sami Vesamäki and
• Arri Priimagi

Beilstein J. Org. Chem. 2025, 21, 1528–1534, doi:10.3762/bjoc.21.115

• ion pair or dissociated ions. The ion pair can be a contact ion pair (CIP), where the ions remain in close proximity through hydrogen bonding or electrostatic interactions, or a solvent-separated ion pair (SIP), where solvent molecules intervene and weaken these interactions [30]. In a moderately

Microwave-enhanced additive-free C–H amination of benzoxazoles catalysed by supported copper

• Andrei Paraschiv,
• Valentina Maruzzo,
• Filippo Pettazzi,
• Stefano Magliocco,
• Paolo Inaudi,
• Daria Brambilla,
• Gloria Berlier,
• Giancarlo Cravotto and
• Katia Martina

Beilstein J. Org. Chem. 2025, 21, 1462–1476, doi:10.3762/bjoc.21.108

• δNH2, at around 3370, 3300 and 1596 cm−1, respectively) and by the νCH2 and δCH2 vibrations (curve a) [64][65]. The broad absorption in the high frequency region is characteristic of hydrogen bonding between Si–OH and NH2 groups in functionalised silica materials. After insertion of Cu(I), small

Advances in nitrogen-containing helicenes: synthesis, chiroptical properties, and optoelectronic applications

• Meng Qiu,
• Jing Du,
• Nai-Te Yao,
• Xin-Yue Wang and
• Han-Yuan Gong

Beilstein J. Org. Chem. 2025, 21, 1422–1453, doi:10.3762/bjoc.21.106

• −1 (Table 3). Importantly, both dimers displayed selective fluoride ion recognition through hydrogen bonding, with (M,M)-12c exhibiting a high binding constant (Ka = 2 × 105 M−1). The resulting [12c·F−] and [12d·F−] complexes exhibited red-shifted circular dichroism (CD), fluorescence, and CPL

• , attributed to intermolecular hydrogen bonding with solvent molecules. With increasing helical length, both the λabs and λem exhibit progressive bathochromic shifts, while the ФF values systematically decline, without clear saturation within the investigated range. Chiroptical measurements of the N-butylated

Tautomerism and switching in 7-hydroxy-8-(azophenyl)quinoline and similar compounds

• Lidia Zaharieva,
• Vera Deneva,
• Fadhil S. Kamounah,
• Nikolay Vassilev,
• Ivan Angelov,
• Michael Pittelkow and
• Liudmil Antonov

Beilstein J. Org. Chem. 2025, 21, 1404–1421, doi:10.3762/bjoc.21.105

• intramolecular hydrogen bonding, keep planarity. However, this situation means that changes in their molar fractions cannot be detected by use of UV–vis spectroscopy, i.e. the tautomerism could be considered only in the frame of change between E and (KE+KK). In the spectra, shown in Figure 2, two distinct

• reasons are different. While in acetonitrile this is the effect of the increased polarity of the solvent, leading to stabilization of the more polar keto tautomers, in the non-polar chloroform it is caused by its proton-donative nature (formation of a stabilizing intermolecular hydrogen bonding with the C

• . without the ability to form hydrogen bonding with the solute) shifts the equilibrium in direction of the keto tautomer [57]. According to the theoretical data, collected in Table 1, the enol form of 2 is substantially more stable and should predominantly exist in toluene. In acetonitrile some traces of KE

Oxetanes: formation, reactivity and total syntheses of natural products

• Peter Gabko,
• Martin Kalník and
• Maroš Bella

Beilstein J. Org. Chem. 2025, 21, 1324–1373, doi:10.3762/bjoc.21.101

•  23) based on the rebound triplet mechanism [64]. The stereochemical behaviour of the reaction is controlled by a novel hydrogen-bonding chiral iridium photocatalyst 86, delivering oxetane products 87 in excellent enantiomeric excess. In this unique photocycloaddition mechanism, previously described