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Search for "X-ray analysis" in Full Text gives 332 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

[1,3]/[1,4]-Sulfur atom migration in β-hydroxyalkylphosphine sulfides

  • Katarzyna Włodarczyk,
  • Piotr Borowski and
  • Marek Stankevič

Beilstein J. Org. Chem. 2020, 16, 88–105, doi:10.3762/bjoc.16.11

Graphical Abstract
  • compounds failed to give single crystals for X-ray analysis. The presence of an oxygen atom attached to the phosphorus atom in the products could be deduced based on 1H and 13C NMR analysis. In the 1H NMR spectra of phosphine sulfide 12, the chemical shifts of the signals belonging to the aromatic protons
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Published 21 Jan 2020

Influence of the cis/trans configuration on the supramolecular aggregation of aryltriazoles

  • Sara Tejera,
  • Giada Caniglia,
  • Rosa L. Dorta,
  • Andrea Favero,
  • Javier González-Platas and
  • Jesús T. Vázquez

Beilstein J. Org. Chem. 2019, 15, 2881–2888, doi:10.3762/bjoc.15.282

Graphical Abstract
  • ) and its X-ray analysis was not accurate enough to resolve its structure. However, its crystal packing (Figure 5) deserves discussion. As with compound 12, this packing revealed a number of π–bromine interactions [19], together with a high degree of π–π stacking interactions between the aromatic rings
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Published 28 Nov 2019

Preparation of anthracene-based tetraperimidine hexafluorophosphate and selective recognition of chromium(III) ions

  • Qing-Xiang Liu,
  • Feng Yang,
  • Zhi-Xiang Zhao,
  • Shao-Cong Yu and
  • Yue Ding

Beilstein J. Org. Chem. 2019, 15, 2847–2855, doi:10.3762/bjoc.15.278

Graphical Abstract
  • 10.3762/bjoc.15.278 Abstract A novel anthracene-based tetraperimidine hexafluorophosphate 3 was prepared, and its structure was determined through X-ray analysis, HRMS as well as 1H and 13C NMR spectroscopy. In the cationic moiety of 3, two (N-ethylperimidinyl–C2H4)2NCH2– arms were attached to the 9- and
  • X-ray analysis as well as 1H and 13C NMR spectroscopy. Particularly, compound 3 was tested as a chemosensor for the recognition of Cr3+ through fluorescence, UV, IR, and 1H NMR spectroscopy along with HRMS. Altogether, the results indicate the utility of 3 as an effective chemosensor for Cr3
  • upon complexation, and the C=N absorption band at 1664 cm−1 shifted to a value of 1672 cm−1. Conclusion In summary, a new anthracene-based tetraperimidine hexafluorophosphate 3 was prepared, and its structure was determined through X-ray analysis and 1H and 13C NMR spectroscopy. Compound 3 was proved
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Published 25 Nov 2019

One-pot synthesis of substituted pyrrolo[3,4-b]pyridine-4,5-diones based on the reaction of N-(1-(4-hydroxy-6-methyl-2-oxo-2H-pyran-3-yl)-2-oxo-2-arylethyl)acetamide with amines

  • Valeriya G. Melekhina,
  • Andrey N. Komogortsev,
  • Boris V. Lichitsky,
  • Vitaly S. Mityanov,
  • Artem N. Fakhrutdinov,
  • Arkady A. Dudinov,
  • Vasily A. Migulin,
  • Yulia V. Nelyubina,
  • Elizaveta K. Melnikova and
  • Michail M. Krayushkin

Beilstein J. Org. Chem. 2019, 15, 2840–2846, doi:10.3762/bjoc.15.277

Graphical Abstract
  • fragments proceeds first, followed by intramolecular cyclization (Scheme 4B). The structure of the 4-chloro-substituted pyrrolopyrimidinone 1e was proven by single crystal X-ray analysis (Figure 1). Despite the unambiguous dominance of the pyridone-based conformation in the solid state of 1e, two tautomers
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Published 25 Nov 2019

A chiral self-sorting photoresponsive coordination cage based on overcrowded alkenes

  • Constantin Stuckhardt,
  • Diederik Roke,
  • Wojciech Danowski,
  • Edwin Otten,
  • Sander J. Wezenberg and
  • Ben L. Feringa

Beilstein J. Org. Chem. 2019, 15, 2767–2773, doi:10.3762/bjoc.15.268

Graphical Abstract
  • different cage structures. Interestingly, the cage structures with Pd2L4 constitution were shown to be homochiral, forming single diastereomers as evident from NMR, CD and X-ray analysis, supported by DFT calculations. Additionally, the cage structures were able to bind OTs− inside their cavity. Although
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Published 15 Nov 2019

Unexpected one-pot formation of the 1H-6a,8a-epiminotricyclopenta[a,c,e][8]annulene system from cyclopentanone, ammonia and dimethyl fumarate. Synthesis of highly strained polycyclic nitroxide and EPR study

  • Sergey A. Dobrynin,
  • Igor A. Kirilyuk,
  • Yuri V. Gatilov,
  • Andrey A. Kuzhelev,
  • Olesya A. Krumkacheva,
  • Matvey V. Fedin,
  • Michael K. Bowman and
  • Elena G. Bagryanskaya

Beilstein J. Org. Chem. 2019, 15, 2664–2670, doi:10.3762/bjoc.15.259

Graphical Abstract
  • ). The structure of the compound was finally confirmed by X-ray analysis and elemental analysis data (Figure 1). A possible mechanism for the formation of 1 is presented in Scheme 2. It is well-known that cyclopentanone is prone to self-condensation. In the presence of ammonia these reactions may lead to
  • assignment was based on the single-crystal X-ray analysis (Figure 4) and a possible mechanism for this hydroxylation is shown in Scheme 4. Oxidation of amines with peracids is known to proceed through oxoammonium cation formation [12]. The close proximity of this reactive group to the allyl hydrogen results
  • nitroxide 6 synthesis. NMR Assignment of 1 based on the HSQC, COSY 1H,1H and 1H,13C spectra. Supporting Information Supporting Information File 552: Copies of the IR and 1H, 13C, HMBC, HSQC NMR spectra and X-ray analysis data. Acknowledgements This study was financially supported by the Ministry of
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Published 07 Nov 2019

AgNTf2-catalyzed formal [3 + 2] cycloaddition of ynamides with unprotected isoxazol-5-amines: efficient access to functionalized 5-amino-1H-pyrrole-3-carboxamide derivatives

  • Ziping Cao,
  • Jiekun Zhu,
  • Li Liu,
  • Yuanling Pang,
  • Laijin Tian,
  • Xuejun Sun and
  • Xin Meng

Beilstein J. Org. Chem. 2019, 15, 2623–2630, doi:10.3762/bjoc.15.255

Graphical Abstract
  • transformations, several desired 5-amino-1H-pyrrole-3-carboxamide products were easily obtained in 96–98% yields (10ab–ad). The structure of 10ad was further confirmed unambiguously by single crystal X-ray analysis (Figure 4). The sterically demanding t-Bu group installed at 5-aminoisoxazole 8e has an obvious
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Published 04 Nov 2019

Self-assembled coordination thioether silver(I) macrocyclic complexes for homogeneous catalysis

  • Zhen Cao,
  • Aline Lacoudre,
  • Cybille Rossy and
  • Brigitte Bibal

Beilstein J. Org. Chem. 2019, 15, 2465–2472, doi:10.3762/bjoc.15.239

Graphical Abstract
  • reactions of alkynes. Results and Discussion Synthesis of silver(I) complexes Ligand 1 was synthesized in one step, from commercially available 9,10-dibromoanthracene and 2-(methylthio)phenylboronic acid, using a Suzuki–Miyaura cross-coupling reaction. Notably, the yield was low (26%) [55], and the X-ray
  • analysis of monocrystals revealed the syn-conformation of 1 (Scheme 1). A variable temperature 1H NMR (VT-NMR, Figures S10–12 in Supporting Information File 1) experiment conducted on syn-1 in the range of –30 to 110 °C in C2D2Cl4 showed the broadening of proton signals, due to the restricted rotation of
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Published 17 Oct 2019

Indium-mediated C-allylation of melibiose

  • Christian Denner,
  • Manuel Gintner,
  • Hanspeter Kählig and
  • Walther Schmid

Beilstein J. Org. Chem. 2019, 15, 2458–2464, doi:10.3762/bjoc.15.238

Graphical Abstract
  • elongation methodology allows for a short, efficient and diastereoselective approach towards complex glycosylated carbohydrate structures. The stereochemical outcome of the key intermediates, allylated disaccharides, has been determined by X-ray analysis. Ozonolysis of the introduced double bond yielded the
  • main product was crystallized and the configuration was determined by X-ray analysis proving the expected syn-configuration (compound 2-syn) [CCDC 1922520] (Figure 1). Epimer 2-syn was applied to Zemplén conditions prior to the ozonolysis. Conventional work-up, neutralization with acidic ion exchange
  • , 20.71, 20.69, 20.66, 20.64, 20.58 (9 × O(C=O)CH3) ppm; HRMS (ESI+) m/z: [M + NH4]+ calcd for C32H48NO21+, 782.2713; found, 782.2720. X-ray analysis of the main C-allylation product 2-syn [CCDC 1922520]. Structures of the main products 5-syn-β and 5-anti-β. Indium-mediated allylation of melibiose (1
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Published 16 Oct 2019

In water multicomponent synthesis of low-molecular-mass 4,7-dihydrotetrazolo[1,5-a]pyrimidines

  • Irina G. Tkachenko,
  • Sergey A. Komykhov,
  • Vladimir I. Musatov,
  • Svitlana V. Shishkina,
  • Viktoriya V. Dyakonenko,
  • Vladimir N. Shvets,
  • Mikhail V. Diachkov,
  • Valentyn A. Chebanov and
  • Sergey M. Desenko

Beilstein J. Org. Chem. 2019, 15, 2390–2397, doi:10.3762/bjoc.15.231

Graphical Abstract
  • the NMR data corresponded quite well to the proposed structure 9, they did not allow the complete rejection of the isomeric structure 9' for the reaction product. The final confirmation of structures 9a–g was achieved by X-ray analysis of 9a (Figure 1). A specific behavior of acetylacetone (10) as the
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Published 08 Oct 2019

Aggregation-induced emission effect on turn-off fluorescent switching of a photochromic diarylethene

  • Luna Kono,
  • Yuma Nakagawa,
  • Ayako Fujimoto,
  • Ryo Nishimura,
  • Yohei Hattori,
  • Toshiki Mutai,
  • Nobuhiro Yasuda,
  • Kenichi Koizumi,
  • Satoshi Yokojima,
  • Shinichiro Nakamura and
  • Kingo Uchida

Beilstein J. Org. Chem. 2019, 15, 2204–2212, doi:10.3762/bjoc.15.217

Graphical Abstract
  • substrate [19]. The X-ray analysis data of a single crystal of 1o is shown in Figure S1 and Table S1 in Supporting Information File 1. The distance between two reactive carbon atoms in the thiophene rings was obtained to be 3.534 Å, which is less than 4.2 Å. It indicates the molecule is photoreactive in the
  • 214: X-ray analysis data of a single crystal of 1o. Supporting Information File 215: Movie 1, quenching rate dependence on the environmental conditions. Supporting Information File 216: Movie 2, fluorescent color change of 1o. Acknowledgements This work was supported by JSPS KAKENHI Grant Number
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Published 20 Sep 2019

Characterization of two new degradation products of atorvastatin calcium formed upon treatment with strong acids

  • Jürgen Krauß,
  • Monika Klimt,
  • Markus Luber,
  • Peter Mayer and
  • Franz Bracher

Beilstein J. Org. Chem. 2019, 15, 2085–2091, doi:10.3762/bjoc.15.206

Graphical Abstract
  • investigated here, even direct protonation at C-3 of the pyrrole by strong acid is most likely, due to the significant basicity of pyrroles. Delocalization of the positive charge (A ↔ A’) as shown in Scheme 2 will support the initial ring protonation step. The X-ray analysis of compound 7 revealed that the
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Published 02 Sep 2019

Regioselective Pd-catalyzed direct C1- and C2-arylations of lilolidine for the access to 5,6-dihydropyrrolo[3,2,1-ij]quinoline derivatives

  • Hai-Yun Huang,
  • Haoran Li,
  • Thierry Roisnel,
  • Jean-François Soulé and
  • Henri Doucet

Beilstein J. Org. Chem. 2019, 15, 2069–2075, doi:10.3762/bjoc.15.204

Graphical Abstract
  • structure of 2 was confirmed by X-ray analysis. A lower yield of 7 was obtained for the reaction of 4-bromobenzaldehyde with lilolidine due to the formation of degradation products. Good yields in 8 and 9 were obtained from 4-chloro- and 4-carbonitrile-substituted aryl bromides. In all cases, with these
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Published 29 Aug 2019

Synthesis of benzo[d]imidazo[2,1-b]benzoselenoazoles: Cs2CO3-mediated cyclization of 1-(2-bromoaryl)benzimidazoles with selenium

  • Mio Matsumura,
  • Yuki Kitamura,
  • Arisa Yamauchi,
  • Yoshitaka Kanazawa,
  • Yuki Murata,
  • Tadashi Hyodo,
  • Kentaro Yamaguchi and
  • Shuji Yasuike

Beilstein J. Org. Chem. 2019, 15, 2029–2035, doi:10.3762/bjoc.15.199

Graphical Abstract
  • tetracyclic heterocycles are all novel compounds. Single-crystal X-ray analysis of the parent benzimidazo[2,1-b]benzoselenoazole revealed that the tetracyclic ring is almost planar. Absorption spectroscopy data of the benzimidazo[2,1-b]benzoselenoazoles showed the λmax was dependent on the number of rings
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Published 26 Aug 2019

Fluorinated azobenzenes as supramolecular halogen-bonding building blocks

  • Esther Nieland,
  • Oliver Weingart and
  • Bernd M. Schmidt

Beilstein J. Org. Chem. 2019, 15, 2013–2019, doi:10.3762/bjoc.15.197

Graphical Abstract
  • the Supporting Information File 1, Figures S6–S8). In addition to that, slow evaporation of an equimolar solution of U1 and A2 in benzene furnished red-orange single crystals suitable for X-ray analysis of a [2 + 2] halogen-bonded box, U1···A2, over the course of a few days in quantitative yield
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Published 23 Aug 2019

Halide metathesis in overdrive: mechanochemical synthesis of a heterometallic group 1 allyl complex

  • Ross F. Koby,
  • Nicholas R. Rightmire,
  • Nathan D. Schley,
  • Timothy P. Hanusa and
  • William W. Brennessel

Beilstein J. Org. Chem. 2019, 15, 1856–1863, doi:10.3762/bjoc.15.181

Graphical Abstract
  • produced crystals that were yellow-orange; they were highly soluble in C6D6, giving a bright red solution. Single crystal X-ray analysis identified the crystals as the heterometallic complex [KCsA'2] (see below). The 1H NMR spectrum of the products from the 1:1 and 3:1 grinds were identical. It should be
  • analogous solvate is obtained, and the resulting crystals are of higher quality than those from toluene. Single crystal X-ray analysis reveals that it has a structure that is qualitatively the same as the toluene solvate, and only the benzene solvate is discussed here. Like the unsolvated complex [KA']∞ [17
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Published 02 Aug 2019
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  • hydrolysis strongly depend on the substituent X on the phosphorus atom. Ions containing a labile P–X bond (X = Cl, O, S), namely A, B, and F–H, gave unstable adducts 2 (registered by GC–MS), which are further transformed into acids 3. The structure of compound 3a was confirmed by X-ray analysis (see
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Published 08 Jul 2019

Synthesis of pyrrolo[1,2-a]quinolines by formal 1,3-dipolar cycloaddition reactions of quinolinium salts

  • Anthony Choi,
  • Rebecca M. Morley and
  • Iain Coldham

Beilstein J. Org. Chem. 2019, 15, 1480–1484, doi:10.3762/bjoc.15.149

Graphical Abstract
  • triethylamine and were pleased to obtain good yields of the adducts 7a–c and 8a,b (Scheme 2). In each case, the products 7a–c and 8a,b were formed as a single regioisomer and stereoisomer. The selectivity in favour of the isomer drawn in Scheme 2 was verified by single crystal X-ray analysis of the adduct 7c
  • to undergo reaction with the ylides derived from the salts 4 and 5. In both cases, very good yields of the tetracyclic adducts 9 and 10 were obtained after heating for only 1 h (Scheme 3). The relative stereochemistry of the adduct 9 was determined by single crystal X-ray analysis (Figure 2). To
  • with N-methylmaleimide in the presence of triethylamine in methanol to give the desired adducts 15a and 15b as single stereoisomers (Scheme 5). The stereochemistry of product 15a was confirmed by single crystal X-ray analysis (see Supporting Information File 1) and matches the relative configuration of
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Published 03 Jul 2019

Introduction of an isoxazoline unit to the β-position of porphyrin via regioselective 1,3-dipolar cycloaddition reaction

  • Xiujun Liu,
  • Xiang Ma and
  • Yaqing Feng

Beilstein J. Org. Chem. 2019, 15, 1434–1440, doi:10.3762/bjoc.15.143

Graphical Abstract
  • the double bond after the cycloaddition reaction, the absorption spectrum shifted to shorter wavelengths. The isoxazoline-modified porphyrins have been identified by absorption, emission, 1H NMR and mass spectrometry, and 3a was further characterized by X-ray analysis. In the crystal, a pair of
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Published 28 Jun 2019

Selenophene-containing heterotriacenes by a C–Se coupling/cyclization reaction

  • Pierre-Olivier Schwartz,
  • Sebastian Förtsch,
  • Astrid Vogt,
  • Elena Mena-Osteritz and
  • Peter Bäuerle

Beilstein J. Org. Chem. 2019, 15, 1379–1393, doi:10.3762/bjoc.15.138

Graphical Abstract
  • crucial cyclization steps to the stable and soluble fused systems were achieved by copper-catalyzed C–S and C–Se coupling/cyclization reactions. Structures and packing motifs in the solid state were elucidated by single crystal X-ray analysis and XRD powder measurements. Comparison of the optoelectronic
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Published 24 Jun 2019

Synthesis of non-racemic 4-nitro-2-sulfonylbutan-1-ones via Ni(II)-catalyzed asymmetric Michael reaction of β-ketosulfones

  • Alexander N. Reznikov,
  • Anastasiya E. Sibiryakova,
  • Marat R. Baimuratov,
  • Eugene V. Golovin,
  • Victor B. Rybakov and
  • Yuri N. Klimochkin

Beilstein J. Org. Chem. 2019, 15, 1289–1297, doi:10.3762/bjoc.15.127

Graphical Abstract
  • suitable for X-ray analysis were obtained for compound 8d (which is formed as an individual diastereomer). This made it possible to determine its absolute (2R,3S)-configuration, as well as to assign the absolute configuration for the other compounds obtained. The molecular structure of compound 8d is shown
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Published 12 Jun 2019

Doebner-type pyrazolopyridine carboxylic acids in an Ugi four-component reaction

  • Maryna V. Murlykina,
  • Oleksandr V. Kolomiets,
  • Maryna M. Kornet,
  • Yana I. Sakhno,
  • Sergey M. Desenko,
  • Victoriya V. Dyakonenko,
  • Svetlana V. Shishkina,
  • Oleksandr A. Brazhko,
  • Vladimir I. Musatov,
  • Alexander V. Tsygankov,
  • Erik V. Van der Eycken and
  • Valentyn A. Chebanov

Beilstein J. Org. Chem. 2019, 15, 1281–1288, doi:10.3762/bjoc.15.126

Graphical Abstract
  • adding compounds 12a–f. The purity and structures of the obtained heterocyclic products were established by means of NMR spectroscopy, mass spectrometry, and elemental analysis. The final assignment of the structures 11 and 12 was made by X-ray analysis for the structure 11n (Figure 1). Antibacterial
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Published 12 Jun 2019

Bambusuril analogs based on alternating glycoluril and xylylene units

  • Tomáš Lízal and
  • Vladimír Šindelář

Beilstein J. Org. Chem. 2019, 15, 1268–1274, doi:10.3762/bjoc.15.124

Graphical Abstract
  • of one glycoluril unit and methine protons of the second glycoluril unit. The monocrystals of 1b suitable for X-ray analysis were obtained upon slow diffusion of diisopropyl ether into the solution of 1b in dichloromethane and benzene. The X-ray structure features Cs symmetry (Figure 5), which is in
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Published 11 Jun 2019

Insertion of [1.1.1]propellane into aromatic disulfides

  • Robin M. Bär,
  • Gregor Heinrich,
  • Martin Nieger,
  • Olaf Fuhr and
  • Stefan Bräse

Beilstein J. Org. Chem. 2019, 15, 1172–1180, doi:10.3762/bjoc.15.114

Graphical Abstract
  • , 13C NMR, X-ray analysis) are provided in the following files. Supporting Information File 514: Description and analyses. Supporting Information File 515: Spectra. Supporting Information File 516: RInChIs. Supporting Information File 517: DOIs data repository. Supporting Information File 518: Reference
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Published 28 May 2019

Mechanochemistry of supramolecules

  • Anima Bose and
  • Prasenjit Mal

Beilstein J. Org. Chem. 2019, 15, 881–900, doi:10.3762/bjoc.15.86

Graphical Abstract
  • to be 100% stereospecific under dry mortar and pestle grinding [110]. The hydrogen-bond donor 4,6-dichlororesorcinol was used as the supramolecular catalyst for the transformation in the solid-state. From single crystal X-ray analysis the authors have proved the formation of the 2:2 complex 42 from
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Published 12 Apr 2019
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