Domino reactions of chromones with activated carbonyl compounds

• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 1256–1269, doi:10.3762/bjoc.20.108

• . The domino reactions presented, which involve mostly the combination of 1,4-additions of the carbonyl compounds to the chromone moiety with ring cleavage reactions, allow for the synthesis of products which are not readily available by other methods. The benefit for the employment of chromones as

Mechanistic investigations of polyaza[7]helicene in photoredox and energy transfer catalysis

• Johannes Rocker,
• Till J. B. Zähringer,
• Matthias Schmitz,
• Till Opatz and
• Christoph Kerzig

Beilstein J. Org. Chem. 2024, 20, 1236–1245, doi:10.3762/bjoc.20.106

• -mentioned methods [39]. However, the longer lifetime of the triplet state usually comes at the expense of a lower energetic driving force. Helicenes in particular show an increased ISC rate compared to planar molecules, which is attributed to an enhanced spin-orbit coupling that is sensitive to their degree

Competing electrophilic substitution and oxidative polymerization of arylamines with selenium dioxide

• Vishnu Selladurai and
• Selvakumar Karuthapandi

Beilstein J. Org. Chem. 2024, 20, 1221–1235, doi:10.3762/bjoc.20.105

• . Computationally optimized structure of aniline (a), o-anisidine (b), and methyl anthranilate (c), with atom labels indicated. Reported synthetic methods for the selenation of aromatic compounds. Reaction of selenium dioxide with aniline. Reaction of selenium dioxide with o-anisidine. Reaction of methyl

The Ugi4CR as effective tool to access promising anticancer isatin-based α-acetamide carboxamide oxindole hybrids

• Carolina S. Marques,
• Aday González-Bakker and
• José M. Padrón

Beilstein J. Org. Chem. 2024, 20, 1213–1220, doi:10.3762/bjoc.20.104

• chemists regarding process formation of new bonds and synthesis of new scaffolds. In drug discovery and development, medicinal chemists struggle everyday towards the creation of new synthetic methods, driven by the increasing complexity of the molecules and taking into consideration economic and social

Stability trends in carbocation intermediates stemming from germacrene A and hedycaryol

• Naziha Tarannam,
• Prashant Kumar Gupta,
• Shani Zev and
• Dan Thomas Major

Beilstein J. Org. Chem. 2024, 20, 1189–1197, doi:10.3762/bjoc.20.101

• germacrene A and hedycaryol and how this might affect product distribution in chemical synthesis and biosynthesis. Additionally, we compare the effect of the choice of DFT functional and basis set on the results. Methods The structures of all studied intermediate carbocations originating from germacrene A

• noteworthy that optimization with ωB97M-V/6-31+G(d,p) and single point calculations performed with M06-2X and ωB97M-V using the triple-ζ def2-TZVPP basis set provide similar trends for both germacrene and hedycaryol carbocations (the energy comparison plots for the different methods are added in Supporting

Bismuth(III) triflate: an economical and environmentally friendly catalyst for the Nazarov reaction

• Manoel T. Rodrigues Jr.,
• Aline S. B. de Oliveira,
• Ralph C. Gomes,
• Amanda Soares Hirata,
• Lucas A. Zeoly,
• Hugo Santos,
• João Arantes,
• Catarina Sofia Mateus Reis-Silva,
• João Agostinho Machado-Neto,
• Leticia Veras Costa-Lotufo and
• Fernando Coelho

Beilstein J. Org. Chem. 2024, 20, 1167–1178, doi:10.3762/bjoc.20.99

• ][8][9][10][11][12]. The interest in the preparation of functionalized indanone derivatives has increased enormously, and many synthetic methods have been developed, including Friedel–Crafts cyclization reactions [13], cyclization of acetylenic derivatives [14], ring contractions and ring expansions

• [15], and the Nazarov reaction [16][17][18][19][20]. The Nazarov cyclization is one of the most versatile and simple methods for preparing indanones from aryl vinyl ketone derivatives [16][17][18][19][20]. The Nazarov reaction is classically formulated as a 4π conrotatory electrocyclization of a

• found in a series of natural products and synthetic molecules with different biological activities [11][80][81]. In particular, 1-indanones substituted in position 3 are important synthons for some drugs and natural products [82][83][84]. A bibliographic survey revealed that some methods were developed

Manganese-catalyzed C–C and C–N bond formation with alcohols via borrowing hydrogen or hydrogen auto-transfer

• Mohd Farhan Ansari,
• Atul Kumar Maurya,
• Abhishek Kumar and
• Saravanakumar Elangovan

Beilstein J. Org. Chem. 2024, 20, 1111–1166, doi:10.3762/bjoc.20.98

• importance in organic synthesis and is widely used in the pharmaceutical and other chemical industries. Palladium-catalyzed cross-coupling reactions are one of the compelling methods for building C–C and C–N bonds [1][2]. However, using organohalide reagents and harsh reaction conditions in this process

Kinetically stabilized 1,3-diarylisobenzofurans and the possibility of preparing large, persistent isoacenofurans with unusually small HOMO–LUMO gaps

• Qian Liu and
• Glen P. Miller

Beilstein J. Org. Chem. 2024, 20, 1099–1110, doi:10.3762/bjoc.20.97

• achievable. As such, these molecules deserve increased attention as a new class of organic semiconductors. Experimental Materials and methods Commercial reagents and solvents were purchased from Sigma-Aldrich, Alfa Aesar, TCI America or Thermo Fisher Scientific, and used as received. Dry solvents were

Light on the sustainable preparation of aryl-cored dibromides

• Fabrizio Roncaglia,
• Alberto Ughetti,
• Nicola Porcelli,
• Biagio Anderlini,
• Andrea Severini and
• Luca Rigamonti

Beilstein J. Org. Chem. 2024, 20, 1076–1087, doi:10.3762/bjoc.20.95

• significant importance as reactive building blocks in polymer and materials chemistry. Their preparation primarily relies on established synthetic methods using molecular bromine or N-bromosuccinimide, known for their reliability and effectiveness. However, from a sustainability perspective, these methods

• environment [15]. Nevertheless, in line with the European Union's 'green new deal' guidelines [16], addressing two pivotal issues could facilitate the environmentally conscious utilisation of halogenated compounds as intermediates in chemical processes: The development of more sustainable production methods

• for halo compounds, potentially involving the use of eco-friendly halogenation reagents. The development of methods for the efficient removal and recycle of halogens, advocating principles of a circular economy. It is noteworthy that both aspects are influenced by the type of halogen employed. When

Mild and efficient synthesis and base-promoted rearrangement of novel isoxazolo[4,5-b]pyridines

• Vladislav V. Nikol’skiy,
• Mikhail E. Minyaev,
• Maxim A. Bastrakov and
• Alexey M. Starosotnikov

Beilstein J. Org. Chem. 2024, 20, 1069–1075, doi:10.3762/bjoc.20.94

• Figure 1. A number of isoxazolo[4,5-b]pyridines has been described in patents, however, there are only a few methods for their synthesis reported in the literature. First representatives of this heterocyclic system were described by Gewald et al. in 1980 [14]. The known methods are usually based on

• molecule is not shown), 13c (top right), and 13d (bottom) with thermal ellipsoids set at a 50% probability level. Intermolecular hydrogen bonds are drawn with dashed lines. Methods for the synthesis of isoxazolo[4,5-b]pyridines: (A) annulation of an isoxazole fragment to a pyridine ring; (B) annulation of

Novel route to enhance the thermo-optical performance of bicyclic diene photoswitches for solar thermal batteries

• Akanksha Ashok Sangolkar,
• Rama Krishna Kadiyam and
• Ravinder Pawar

Beilstein J. Org. Chem. 2024, 20, 1053–1068, doi:10.3762/bjoc.20.93

• barriers were accounted using the DLPNO-CCSD(T) and (8,8)-CASPT2 methods, respectively. The photophysical properties including the absorption onset, excitation wavelengths, and the absorption intensities were extensively investigated with the time-dependent calculations. The result provides information on

• -311++G** method for the TS geometry obtained using CI-NEB and Gaussian16 is shown by histograms in Figure 2c. These TBR barriers calculated using both methods are also provided in Table 1. It is clear from Figure 2c that the TBR barrier solely depends on the type of heteroatom unit used to extend the

• , the storage energy was also calculated using the polarizable continuum model (PCM) [43]. The storage energy calculated using both the methods are systematically compared. All the above-mentioned calculations were accomplished using the density functional theory (DFT) implemented in Gaussian 16 [44

Structure–property relationships in dicyanopyrazinoquinoxalines and their hydrogen-bonding-capable dihydropyrazinoquinoxalinedione derivatives

• Tural N. Akhmedov,
• Ajeet Kumar,
• Daken J. Starkenburg,
• Kyle J. Chesney,
• Khalil A. Abboud,
• Novruz G. Akhmedov,
• Jiangeng Xue and
• Ronald K. Castellano

Beilstein J. Org. Chem. 2024, 20, 1037–1052, doi:10.3762/bjoc.20.92

• DCPQs and DPQDs in this context. Overall, this work contributes to our overarching objective to investigate the influence of hydrogen-bonding functionality on optoelectronic material organization and next-generation organic semiconductor device performance. Experimental General methods Reagents and

• and 1b–7b in DMSO.a Supporting Information Supporting Information File 6: General experimental methods, 1H and 13C NMR, and HRMS spectra of the compounds as well as photophysical, computational and X-ray data. Acknowledgements This work is based on Tural N. Akhmedov’s doctoral thesis (“Design

Auxiliary strategy for the general and practical synthesis of diaryliodonium(III) salts with diverse organocarboxylate counterions

• Naoki Miyamoto,
• Daichi Koseki,
• Kohei Sumida,
• Elghareeb E. Elboray,
• Naoko Takenaga,
• Ravi Kumar and
• Toshifumi Dohi

Beilstein J. Org. Chem. 2024, 20, 1020–1028, doi:10.3762/bjoc.20.90

• are versatile reagents that exhibit a range of reactions, both in the presence and absence of metal catalysts. In this study, we developed efficient synthetic methods for the preparation of aryl(TMP)iodonium(III) carboxylates, by reaction of (diacetoxyiodo)arenes or iodosoarenes with 1,3,5

• , consequently yielding the desired products in high yields. However, the common synthetic methods of diaryliodonium(III) triflates involving a strong oxidizing agent with a strong acid and an electron-rich arene often resulted in black/discolored products, indicating decomposition, poor yields, and lower

Spin and charge interactions between nanographene host and ferrocene

• Akira Suzuki,
• Yuya Miyake,
• Ryoga Shibata and
• Kazuyuki Takai

Beilstein J. Org. Chem. 2024, 20, 1011–1019, doi:10.3762/bjoc.20.89

• and guest molecules will give insight into a new class of developing methods of molecular magnets. XPS spectra for ACFs and FeCp2-ACFs-150. Peaks without labels originate from the indium substrate used for mounting the samples. The base lines of the spectra are shifted vertically from each other for

A Diels–Alder probe for discovery of natural products containing furan moieties

• Alyssa S. Eggly,
• Namuunzul Otgontseren,
• Carson B. Roberts,
• Amir Y. Alwali,
• Haylie E. Hennigan and
• Elizabeth I. Parkinson

Beilstein J. Org. Chem. 2024, 20, 1001–1010, doi:10.3762/bjoc.20.88

• supernatant. There are two main types of molecular probes based on their detection methods: imaging and UV–vis (Figure 2A). An imaging probe contains a mass spectrometry (MS) tag, oftentimes a halogen with a distinct isotopic ratio such as chlorine or bromine. A UV–vis probe contains a UV-tag, such as an

• Supporting Information File 10: Experimental materials and methods, supplemental figures, and supplemental spectra. Acknowledgements This work was supported in part by the Research Instrumentation Center in the Department of Chemistry at Purdue University. We thank G. Challis (University of Warwick), L

Carbonylative synthesis and functionalization of indoles

• Alex De Salvo,
• Raffaella Mancuso and
• Xiao-Feng Wu

Beilstein J. Org. Chem. 2024, 20, 973–1000, doi:10.3762/bjoc.20.87

• relevant intermediates in organic synthesis [52][53]. Therefore, the significance of 6H-isoindolo[2,1-a]indol-6-ones has led to a longstanding interest in the development of efficient and versatile methods for their synthesis. In 2016, four independent studies reported the first successful application of a

• , the Li’s group and Zeng and Alper developed two different methods for carrying out a direct carbonylation of indoles with alkynes. Li’s group reported the direct Sonogashira carbonylation coupling reaction of indoles and alkynes catalyzed by Pd/CuI in the presence of iodine as oxidant [71]. The

Innovative synthesis of drug-like molecules using tetrazole as core building blocks

• Jingyao Li,
• Ajay L. Chandgude,
• Qiang Zheng and
• Alexander Dömling

Beilstein J. Org. Chem. 2024, 20, 950–958, doi:10.3762/bjoc.20.85

• . It aims to meet the growing demand for tetrazole-based compound libraries and novel scaffolds, which are challenging to synthesize through other methods. Keywords: building blocks; green chemistry; multicomponent reaction; Passerini tetrazole reaction; tetrazole; Ugi reaction; Introduction The

• . During preclinical research large screening libraries are integral part of the structure-based drug design and high-throughput screening and facile, efficient synthetic methods to explore diverse chemical spaces are of great help [2][3][4]. However, due to the vastness of chemical space, generation of

• the high synthetic value, significant efforts have been devoted to developing methods for the preparation of the tetrazole scaffolds, in particular recently through multicomponent reactions (MCRs) and mostly Ugi and Passerini reactions [7][8][9]. Traditionally, due to its charged nature the tetrazole

Monitoring carbohydrate 3D structure quality with the Privateer database

• Jordan S. Dialpuri,
• Haroldas Bagdonas,
• Lucy C. Schofield,
• Phuong Thao Pham,
• Lou Holland and
• Jon Agirre

Beilstein J. Org. Chem. 2024, 20, 931–939, doi:10.3762/bjoc.20.83

• scientists. The Privateer software is a validation and analysis tool that provides access to a number of metrics and links to external experimental resources, allowing users to evaluate structures using carbohydrate-specific methods. Here, we present the Privateer database, a free resource that aims to

• intensities or amplitudes); each entry includes a re-refined, sometimes even re-built to some extent, copy of the original model. These newer versions are produced with state-of-the-art methods, many of which were probably not available at the time of deposition; hence, the quality of the models is expected

• to improve. Because the methodology included in PDB-REDO had been affected by the lack of automatic support that plagued general purpose crystallographic model building and refinement software [4], carbohydrate-specific methods have been gradually introduced over the years [22][23]. Whilst Privateer

Direct synthesis of acyl fluorides from carboxylic acids using benzothiazolium reagents

• Lilian M. Maas,
• Alex Haswell,
• Rory Hughes and
• Matthew N. Hopkinson

Beilstein J. Org. Chem. 2024, 20, 921–930, doi:10.3762/bjoc.20.82

• studied due to the easy accessibility of fluoride ions with many methods directly employing the parent carboxylic acid as substrate. These processes avoid an additional pre-functionalisation step and have been reported using a range of deoxyfluorinating reagents including (diethylamino)sulfur trifluoride

Synthesis and properties of 6-alkynyl-5-aryluracils

• Ruben Manuel Figueira de Abreu,
• Till Brockmann,
• Alexander Villinger,
• Peter Ehlers and
• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 898–911, doi:10.3762/bjoc.20.80

• a targeted enzyme [21][22][23]. One of these focus areas was the synthesis of alkyne-linked derivatives. The first alkyne-linked compound was already published in 1976, accompanied by new synthesis methods in the following years [24][25][26][27]. With the discovery of potential antiviral properties

• and other synthetic opportunities, alkyne-linked derivatives remained an integral part of research to the present day [28][29][30][31][32][33][34][35]. However, the main methods known so far are to substitute uracil either only at position 6 or at position 5 [26][27][28][34][35][36][37][38][39][40][41

• ][42][43][44][45][46][47]. The remaining known methods use only both positions to induce cyclization [25][31][32][33][48][49][50][51][52][53][54][55][56]. Therefore, to the best of our knowledge, there are no known methods that allow the selective reaction of both positions of uracil (Figure 2). In

Three-component N-alkenylation of azoles with alkynes and iodine(III) electrophile: synthesis of multisubstituted N-vinylazoles

• Jun Kikuchi,
• Roi Nakajima and
• Naohiko Yoshikai

Beilstein J. Org. Chem. 2024, 20, 891–897, doi:10.3762/bjoc.20.79

• natural products and pharmaceutical agents, including antifungal drugs [1][2][3], and hence their selective preparation has attracted considerable attention from the synthetic community. Compared to methods for the de novo construction of azole heterocycles, direct functionalization of the azole N–H bond

(Bio)isosteres of ortho- and meta-substituted benzenes

• H. Erik Diepers and
• Johannes C. L. Walker

Beilstein J. Org. Chem. 2024, 20, 859–890, doi:10.3762/bjoc.20.78

• , respectively (Scheme 12B) [58]. Saponification of the ester moieties in these species followed by Curtius rearrangements then led to amines 114 and 116. Non-natural amino acid derivatives 113 and 117 are intermediates prepared using these methods that could be of interest to medicinal chemistry. Alcohol 111

• substituents. It is therefore unsurprising that the number of methods seeking to access these has increased in recent times. In 2022 Brown and co-workers reported a strain release [2π + 2σ] cycloaddition induced by triplet energy transfer for the synthesis of 1,2,4-BCHs and 1,2,5-BCHs [38]. Some earlier

Confirmation of the stereochemistry of spiroviolene

• Yao Kong,
• Yuanning Liu,
• Kaibiao Wang,
• Tao Wang,
• Chen Wang,
• Ben Ai,
• Hongli Jia,
• Guohui Pan,
• Min Yin and
• Zhengren Xu

Beilstein J. Org. Chem. 2024, 20, 852–858, doi:10.3762/bjoc.20.77

• : Materials, synthetic methods, and copies of NMR spectra for all compounds. Supporting Information File 20: Crystallographic information file of compound 13. Funding We are grateful to the National Natural Science Foundation of China (No. 81973197, 81991525, 22107008), Beijing Natural Science Foundation (No

Advancements in hydrochlorination of alkenes

• Daniel S. Müller

Beilstein J. Org. Chem. 2024, 20, 787–814, doi:10.3762/bjoc.20.72

• activated alkenes, extending this tolerance to the polar hydrochlorination of terminal alkenes remains a challenge. Metal-catalyzed radical hydrochlorination reactions have emerged as a practical solution, providing a versatile approach to hydrochlorinate a wide range of alkenes. Methods such as ours

Methodology for awakening the potential secondary metabolic capacity in actinomycetes

• Shun Saito and
• Midori A. Arai

Beilstein J. Org. Chem. 2024, 20, 753–766, doi:10.3762/bjoc.20.69

• identified. These as yet undiscovered secondary metabolite biosynthesis genes are called “silent genes”, because they are either not expressed or their expression levels are low under normal culture conditions. A number of studies have reported methods to activate these genes, and many new compounds have

• been discovered. In this review, we outline the silent gene activation methods, including the authors’ efforts (Figure 1). Review Artificial methods Several target-oriented methods focusing on specific biosynthetic genes and regulatory factors and artificial methods have been reported to activate

• the tetR regulator have been reported in several studies as methods to improve target-substance production capacity. Interestingly, Wilbanks et al. reported the structure–activity relationships of bacterial hormones in secondary metabolite biosynthesis by diversifiable synthesis [41]. The ability to