Binding of tryptophan and tryptophan-containing peptides in water by a glucose naphtho crown ether

• Gianpaolo Gallo and
• Bartosz Lewandowski

Beilstein J. Org. Chem. 2025, 21, 541–546, doi:10.3762/bjoc.21.42

• peptides [4][5]. Tryptophan also serves as a substrate to produce hormones such as serotonin or melatonin [6][7]. Due to the biological relevance of tryptophan synthetic receptors for this amino acid are highly sought after [8]. From a biological perspective it is especially desirable to achieve selective

Photomechanochemistry: harnessing mechanical forces to enhance photochemical reactions

• Francesco Mele,
• Ana M. Constantin,
• Andrea Porcheddu,
• Raimondo Maggi,
• Giovanni Maestri,
• Nicola Della Ca’ and
• Luca Capaldo

Beilstein J. Org. Chem. 2025, 21, 458–472, doi:10.3762/bjoc.21.33

• -minimized conditions. Despite its transformative potential, the field faces significant technological challenges that must be addressed to unlock its full capabilities. In this Perspective, we analyze selected examples to showcase the available technologies to combine light and mechanical forces, including

• side, typical reactors used for classical mechanochemical synthesis are made of non-transparent materials such as stainless steel (SS), zirconia, or polytetrafluoroethylene (PTFE), making the use of photons operationally difficult. In this Perspective, we gathered selected examples to showcase how

• of the current technological advancement in the field. This Perspective is organized into four sections based on the adopted setup for photomechanochemistry: manual grinding, vortex mixing, rod milling methods, and ball milling (Figure 2, bottom). One final note is about the solvent adopted: in some

Beyond symmetric self-assembly and effective molarity: unlocking functional enzyme mimics with robust organic cages

• Keith G. Andrews

Beilstein J. Org. Chem. 2025, 21, 421–443, doi:10.3762/bjoc.21.30

• demonstrating enzyme-like rate accelerations remain rare. This perspective will briefly highlight some of the key advances in traditional cavity catalysis, by cavity type, in order to contextualize the recent development of robust organic cage catalysts, which can exploit stability, functionality, and reduced

• precision. In this perspective, I identify three clear areas for increased focus to achieve this ambition: (1) the development of modular cavities featuring sub-Ångstrom-confined bifunctionality (including frustrated charges); (2) improved access to stable cavities with reduced symmetry via self-assembly by

• that an underexplored cavity type, robust organic cages [38][39][40][41][42][43][44][45][46][47], are uniquely positioned to facilitate these advances. Outline and Overview The aim of this perspective is twofold: (1) to briefly review the state of the art of cavity catalysis, highlighting the catalytic

The effect of neighbouring group participation and possible long range remote group participation in O-glycosylation

• Rituparna Das and
• Balaram Mukhopadhyay

Beilstein J. Org. Chem. 2025, 21, 369–406, doi:10.3762/bjoc.21.27

• intricate details of glycosylation reactions [67][68] and different protecting groups employed in glycosylation [69]. In this review, we have compiled and critically analysed the contribution of protecting groups in glycosylation reactions both from the perspective of neighbouring group in the vicinal

Red light excitation: illuminating photocatalysis in a new spectrum

• Lucas Fortier,
• Corentin Lefebvre and
• Norbert Hoffmann

Beilstein J. Org. Chem. 2025, 21, 296–326, doi:10.3762/bjoc.21.22

• irradiation apparatus, e.g., UV radiation sources. Secondly, from a synthetic perspective, a broader range of substrates and catalysts can be considered as in most cases, they are incapable of absorbing red light and, consequently, cannot initiate a photocatalytic transformation, thereby minimizing the risk

Emerging trends in the optimization of organic synthesis through high-throughput tools and machine learning

• Pablo Quijano Velasco,
• Kedar Hippalgaonkar and
• Balamurugan Ramalingam

Beilstein J. Org. Chem. 2025, 21, 10–38, doi:10.3762/bjoc.21.3

• of suggested optimization results. Through an examination of methodologies, algorithms, and various case studies, this article offers our perspective on the state-of-the-art techniques for optimizing the synthesis of organic molecules, highlighting both challenges and prospects. The structure of this

Multicomponent reactions driving the discovery and optimization of agents targeting central nervous system pathologies

• Lucía Campos-Prieto,
• Aitor García-Rey,
• Eddy Sotelo and
• Ana Mallo-Abreu

Beilstein J. Org. Chem. 2024, 20, 3151–3173, doi:10.3762/bjoc.20.261

• to the authors whose important contributions may not be included. By concentrating on these pivotal studies, we strive to offer a clear and concise perspective on current research trends and breakthroughs in this field. Keywords: Alzheimer; depression; epilepsy; multicomponent reactions; Parkinson

Surprising acidity for the methylene of 1,3-indenocorannulenes?

• Shi Liu,
• Märt Lõkov,
• Sofja Tshepelevitsh,
• Ivo Leito,
• Kim K. Baldridge and
• Jay S. Siegel

Beilstein J. Org. Chem. 2024, 20, 3144–3150, doi:10.3762/bjoc.20.260

• -perfluorophenylfluorene (28.14 in CH3CN). This work reports quantitative pKa values of BFC and FIC, places those values in a broadened context of CpH-cognate hydrocarbon acidity and presents a Clar–Loschmidt graph perspective to help understand the “surprises”. Keywords: acidity; aromatic hydrocarbon; Clar sextet

• and BFC in DMSO, respectively, so to the extent that these values are surprising, the problem must mostly come from a distortion of our perspective, and not from any dispute between theory and experiment. If that is the case, then what might be a better perspective to investigate CpH-PAH structures

• like BIC and FIC? Let us consider a perspective based on the teachings of Clar and Loschmidt. Clar held the electron sextet as the paragon of aromaticity [14] and Loschmidt considered benzene a "group element" [15]. Combining these perspectives, one can view PAH networks as graphs comprised of Clar

Chemical structure metagenomics of microbial natural products: surveying nonribosomal peptides and beyond

• Thomas Ma and
• John Chu

Beilstein J. Org. Chem. 2024, 20, 3050–3060, doi:10.3762/bjoc.20.253

• recent years and new methods capable of exploring the natural product chemical space more broadly and more efficiently is in urgent need. Chemical structure metagenomics as one such method is the theme of this Perspective. It emphasizes a chemical-structure-centered viewpoint toward natural product

• of almost any bioactivity of interest that originate from plants, fungi, and even animals (such as sponges and corals). Perspective BGF can access only a fraction of the natural product chemical space For nearly a century, BGF has been the method of choice and identified the vast majority of natural

• morphology of the host, etc. [25]. Sequence and function metagenomic approaches have been reviewed elsewhere and will not be covered herein [26][27][28]. This Perspective focuses on chemical structure metagenomics (Figure 2c), an emerging field that integrates bioinformatics, chemical synthesis, molecular

Photoluminescence color-tuning with polymer-dispersed fluorescent films containing two fluorinated diphenylacetylene-type fluorophores

• Kazuki Kobayashi,
• Shigeyuki Yamada,
• Motohiro Yasui and
• Tsutomu Konno

Beilstein J. Org. Chem. 2024, 20, 2682–2690, doi:10.3762/bjoc.20.225

• could be developed by precisely controlling the two-component mixture system of blue- and yellow-fluorescent molecules. From the perspective of both the PL color and ΦPL, we selected the methoxy-substituted compound 1a as an effective blue-fluorescent molecule for use in a two-component mixing system

A review of recent advances in electrochemical and photoelectrochemical late-stage functionalization classified by anodic oxidation, cathodic reduction, and paired electrolysis

• Nian Li,
• Ruzal Sitdikov,
• Ajit Prabhakar Kale,
• Joost Steverlynck,
• Bo Li and
• Magnus Rueping

Beilstein J. Org. Chem. 2024, 20, 2500–2566, doi:10.3762/bjoc.20.214

• . Subsequently, the generated intermediate 29 is oxidized at the anode, then attacked by the acid to obtain the final product (Scheme 10). C–H bond sulfur functionalization: The direct formation of the CS bond is an attractive way to prepare aryl sulfides. From this perspective, Wu and coworkers developed a

HFIP as a versatile solvent in resorcin[n]arene synthesis

• Hormoz Khosravi,
• Valeria Stevens and
• Raúl Hernández Sánchez

Beilstein J. Org. Chem. 2024, 20, 2469–2475, doi:10.3762/bjoc.20.211

• reported herein may impact the synthesis of other macrocyclic arene species, e.g., calix[n]arenes, calix[4]pyrroles, pillar[n]arenes, and cucurbit[n]urils [90][91][92]. Perspective Supramolecular chemistry is a mature field that has crossed boundaries into many other scientific areas. However, the work

Improved deconvolution of natural products’ protein targets using diagnostic ions from chemical proteomics linkers

• Andreas Wiest and
• Pavel Kielkowski

Beilstein J. Org. Chem. 2024, 20, 2323–2341, doi:10.3762/bjoc.20.199

• compounds. Furthermore, from this perspective, the formed probe–protein covalent conjugate shares many features with naturally occurring protein post-translational modifications (PTMs) offering productive exchange of the techniques and experimental setups used in both fields (Figure 2B) [33][34]. The second

Catalysing (organo-)catalysis: Trends in the application of machine learning to enantioselective organocatalysis

• Stefan P. Schmid,
• Leon Schlosser,
• Frank Glorius and
• Kjell Jorner

Beilstein J. Org. Chem. 2024, 20, 2280–2304, doi:10.3762/bjoc.20.196

• ’ perspective, the exploitation of the concept of mechanistic transferability is a promising avenue for the application of ML in enantioselective organocatalysis, as combining data from multiple reactions enlarges datasets. As such, it is an important stepping stone towards the development of more generally

Factors influencing the performance of organocatalysts immobilised on solid supports: A review

• Zsuzsanna Fehér,
• Dóra Richter,
• Gyula Dargó and
• József Kupai

Beilstein J. Org. Chem. 2024, 20, 2129–2142, doi:10.3762/bjoc.20.183

• and an environmental perspective. An efficient catalytic process is characterised by the fact that the catalyst can be easily and, if possible, completely separated from the reaction mixture. Catalysts can be classified into homogeneous and heterogeneous catalysts. In homogeneous catalysis, the

Efficacy of radical reactions of isocyanides with heteroatom radicals in organic synthesis

• Akiya Ogawa and
• Yuki Yamamoto

Beilstein J. Org. Chem. 2024, 20, 2114–2128, doi:10.3762/bjoc.20.182

• with a variety of heteroatoms. In this Perspective, we review the addition and cyclization reactions of heteroatom radicals with isocyanides and discuss the synthetic prospects of the reaction of isocyanides with heteroatom radicals. Keywords: aza-Bergman cyclization; heteroatom-mixed system; imidoyl

• , systematic studies of addition reactions of heteroatom radicals to isocyanides are still limited. In this perspective paper, we systematically review the addition reactions of heteroatom radicals to isocyanides and discuss prospects. Discussion 1,1-Addition of heteroatom radicals to isocyanides Generation of

• understand the conditions for the generation of heteroatom radicals. In addition, from the perspective of recent green chemistry, the development of environmentally friendly synthetic methods is strongly demanded. In other words, a new synthetic method should have excellent atom economy, produce no waste, be

Diastereoselective synthesis of highly substituted cyclohexanones and tetrahydrochromene-4-ones via conjugate addition of curcumins to arylidenemalonates

• Deepa Nair,
• Abhishek Tiwari,
• Banamali Laha and
• Irishi N. N. Namboothiri

Beilstein J. Org. Chem. 2024, 20, 2016–2023, doi:10.3762/bjoc.20.177

• double Michael addition of γ,δ-unsaturated-β-keto esters or Nazarov reagents with suitable acceptors such as nitroalkenes or alkylideneazalactones [7][8][9][10]. From the perspective of an active methylene containing organic moiety, curcumin and its analogs serve as inexpensive and readily available

Novel oxidative routes to N-arylpyridoindazolium salts

• Oleg A. Levitskiy,
• Yuri K. Grishin and
• Tatiana V. Magdesieva

Beilstein J. Org. Chem. 2024, 20, 1906–1913, doi:10.3762/bjoc.20.166

• oxidation of both N-centers was demonstrated in [19]. The wide variety of the subsequent reaction channels for the radical cations formed under chemical or electrochemical oxidation of diarylamines, as well as availability of variously substituted diarylamines make them perspective starting compounds for

• −1.2V to −1.3 V region (Table 1). In case of S2, the second reduction peak corresponds to the reduction of the carbonyl group. Thus, the electrochemical window for the new salts exceeds 3.5 V; that makes their molten forms perspective for application as ionic liquids. As follows from Table 1, oxidation

Hetero-polycyclic aromatic systems: A data-driven investigation of structure–property relationships

• Sabyasachi Chakraborty,
• Eduardo Mayo Yanes and
• Renana Gershoni-Poranne

Beilstein J. Org. Chem. 2024, 20, 1817–1830, doi:10.3762/bjoc.20.160

• subsequent sections. Influence of heterocycle type In this section, we focus on the character and type of the rings comprising the cc-hPASs, going from the broader perspective (size) to a more detailed view (aromatic/antiaromatic) and finally to the specific type of ring. Size of ring In the broadest sense

Syntheses and medicinal chemistry of spiro heterocyclic steroids

• Laura L. Romero-Hernández,
• Ana Isabel Ahuja-Casarín,
• Penélope Merino-Montiel,
• Sara Montiel-Smith,
• José Luis Vega-Báez and
• Jesús Sandoval-Ramírez

Beilstein J. Org. Chem. 2024, 20, 1713–1745, doi:10.3762/bjoc.20.152

• perspective, the incorporation of a spiro fragment significantly impacts the properties of the drug candidate. Introducing a spirocyclic moiety often leads to increased potency and selectivity, as observed in comparisons between spirocycles and their non-spiro counterparts. Furthermore, several examples

Regio- and stereochemical stability induced by anomeric and gauche effects in difluorinated pyrrolidines

• Ana Flávia Candida Silva,
• Francisco A. Martins and
• Matheus P. Freitas

Beilstein J. Org. Chem. 2024, 20, 1572–1579, doi:10.3762/bjoc.20.140

• Lewis interactions from a natural bond orbital perspective. Keywords: anomeric effect; fluoropyrrolidine; gauche effect; stereochemistry; Introduction The pyrrolidine ring structure is prevalent in numerous natural alkaloids and is an important feature of the proline and hydroxyproline residues that

Bioinformatic prediction of the stereoselectivity of modular polyketide synthase: an update of the sequence motifs in ketoreductase domain

• Changjun Xiang,
• Shunyu Yao,
• Ruoyu Wang and
• Lihan Zhang

Beilstein J. Org. Chem. 2024, 20, 1476–1485, doi:10.3762/bjoc.20.131

• bioinformatics perspective, and will facilitate accurate stereochemical prediction and genome mining of complex polyketides. Experimental Sequence collection and screening All cis-AT PKS and PKS-NRPS amino acid sequences recorded in MIBiG, as well as the PKS sequences reported in literatures we have curated were

Predicting bond dissociation energies of cyclic hypervalent halogen reagents using DFT calculations and graph attention network model

• Yingbo Shao,
• Zhiyuan Ren,
• Zhihui Han,
• Li Chen,
• Yao Li and
• Xiao-Song Xue

Beilstein J. Org. Chem. 2024, 20, 1444–1452, doi:10.3762/bjoc.20.127

• Supporting Information File 1). The computational homolytic BDEs are presented in Table 1. From the perspective of halogen centers, hypervalent iodine(III) reagents exhibit the highest homolytic BDEs, followed by hypervalent bromine(III) reagents, while hypervalent chlorine(III) reagents have the lowest

• be too reactive to be isolated. From the perspective of transfer groups, the homolytic BDEs of groups with strong trans effects [82][83][84] such as -F, -CCH, -CN, -OCF3, -OTf, -OTs are elevated, while those of -N3, -NH2, -SCF3, etc. are smaller. These results are consistent with our previous studies

Light on the sustainable preparation of aryl-cored dibromides

• Fabrizio Roncaglia,
• Alberto Ughetti,
• Nicola Porcelli,
• Biagio Anderlini,
• Andrea Severini and
• Luca Rigamonti

Beilstein J. Org. Chem. 2024, 20, 1076–1087, doi:10.3762/bjoc.20.95

• significant importance as reactive building blocks in polymer and materials chemistry. Their preparation primarily relies on established synthetic methods using molecular bromine or N-bromosuccinimide, known for their reliability and effectiveness. However, from a sustainability perspective, these methods

Synthesis of new representatives of A₃B-type carboranylporphyrins based on meso-tetra(pentafluorophenyl)porphyrin transformations

• Victoria M. Alpatova,
• Evgeny G. Rys,
• Elena G. Kononova and
• Valentina A. Ol'shevskaya

Beilstein J. Org. Chem. 2024, 20, 767–776, doi:10.3762/bjoc.20.70

• meso-pentafluorophenyl-substituted porphyrins. Carboranes, due to their unique physical and chemical properties such as high chemical and biological stability [28][29], three-dimensional aromaticity [30][31], low toxicity [28], high hydrophobicity, and enriched boron content [32][33] are perspective