Synthesis of pyrrolo[3,2-d]pyrimidine-2,4(3H)-diones by domino C–N coupling/hydroamination reactions

• Ruben Manuel Figueira de Abreu,
• Robin Tiedemann,
• Peter Ehlers and
• Peter Langer

Beilstein J. Org. Chem. 2025, 21, 1010–1017, doi:10.3762/bjoc.21.82

• activities. Development of drugs based on pyrrolopyrimidines: A: Cadeguomycin. B: Tubercidin. C: Toyocamycin. D: Batzelladine A. E: Sangivamycin. F: Pemetrexed. G: Immucillin H. H: TAK-285 (tyrosine kinase inhibitor). UV–vis absorption (left) and emission (right, λex = 300 nm) spectra of compounds 4a, 4j, 4k

Orthogonal photoswitching of heterobivalent azobenzene glycoclusters: the effect of glycoligand orientation in bacterial adhesion

• Leon M. Friedrich and
• Thisbe K. Lindhorst

Beilstein J. Org. Chem. 2025, 21, 736–748, doi:10.3762/bjoc.21.57

• -interactions of the aromatic azobenzene portion with the so-called tyrosine gate at the entrance of the FimH carbohydrate binding domain constituted by Tyr48 and Tyr137 [44]. In case of the glycoazobenzene antennas 6αMan 4 and 3αMan 5, it is apparent that the inhibitory potency of the individual glycoconjugate

• . Supporting Information File 1). The calculations were performed with two conformers of FimH, the open and the closed gate conformation, PDB 1KLF [45] and PDB 1UWF [46], respectively. These protein structures differ in the relative orientation of the so-called tyrosine gate, which is formed by Tyr48 and

Photocatalyzed elaboration of antibody-based bioconjugates

• Marine Le Stum,
• Eugénie Romero and
• Gary A. Molander

Beilstein J. Org. Chem. 2025, 21, 616–629, doi:10.3762/bjoc.21.49

• additionally generate an undesirable new stereocenter [26][27]. Few methods have been developed for the functionalization of tyrosine (Tyr) and tryptophan (Trp). With a low abundance (≈3%) in proteins, Tyr modifications are widely recognized for their ability to profoundly impact protein properties and

• give satisfactory reproducibility. Histidine/Tyr More recently, the same research group demonstrated the divergent functionalization of tyrosine or histidine, thanks to the use of a DNA photoswitch Ru complex, either used as a standalone system or involved in an artificial metalloenzyme (ArM). The use

• of the ArM significantly enhances the potential of the photocatalyst for antibody modification [43]. By inserting a [Ru(bpy)2dppz]2+ complex into the apo-form of riboflavin-binding protein (RFBP), a complete reversal of selectivity was achieved: the Ru complex alone enabled tyrosine modification via

Antibiofilm and cytotoxic metabolites from the entomopathogenic fungus Samsoniella aurantia

• Rita Toshe,
• Syeda J. Khalid,
• Blondelle Matio Kemkuignou,
• Esteban Charria-Girón,
• Paul Eckhardt,
• Birthe Sandargo,
• Kunlapat Nuchthien,
• J. Jennifer Luangsa-ard,
• Till Opatz,
• Hedda Schrey,
• Sherif S. Ebada and
• Marc Stadler

Beilstein J. Org. Chem. 2025, 21, 327–339, doi:10.3762/bjoc.21.23

• -ketoheptaketide that would in turn combine to a tyrosine moiety bound to NRPS to afford the first tetramic acid derivative. Then, oxygenation at C-2’ of the afforded first product followed by tautomerization would yield farinosone D (1), whereas oxidative ring expansion instead of tautomerization would produce

Red light excitation: illuminating photocatalysis in a new spectrum

• Lucas Fortier,
• Corentin Lefebvre and
• Norbert Hoffmann

Beilstein J. Org. Chem. 2025, 21, 296–326, doi:10.3762/bjoc.21.22

Streamlined modular synthesis of saframycin substructure via copper-catalyzed three-component assembly and gold-promoted 6-endo cyclization

• Asahi Kanno,
• Ryo Tanifuji,
• Satoshi Yoshida,
• Sota Sato,
• Saori Maki-Yonekura,
• Kiyofumi Takaba,
• Jungmin Kang,
• Kensuke Tono,
• Koji Yonekura and
• Hiroki Oguri

Beilstein J. Org. Chem. 2025, 21, 226–233, doi:10.3762/bjoc.21.14

• of saframycin A (1) is assembled from two molecules of ʟ-tyrosine derivative 5 and peptidyl aldehyde 6 by non-ribosomal peptide synthetases (NRPS, Scheme 1a) [15][16][17][18][19][20][21]. The pivotal NRPS module, SfmC, catalyzes iterative regio- and stereoselective Pictet–Spengler (PS)-type

Ceratinadin G, a new psammaplysin derivative possessing a cyano group from a sponge of the genus Pseudoceratina

• Shin-ichiro Kurimoto,
• Kouta Inoue,
• Taito Ohno and
• Takaaki Kubota

Beilstein J. Org. Chem. 2024, 20, 3215–3220, doi:10.3762/bjoc.20.267

• [25][26][27][28]. It is known that natural nitrile compounds are biosynthesized through various mechanisms [29]. Rinehart and co-workers demonstrated that 2-(3,5-dibromo-4-hydroxyphenyl)acetonitrile is biosynthesized from ʟ-tyrosine via 3,5-dibromo-ʟ-tyrosine, based on experiments using 14C- and 15N

• -labeled ʟ-phenylalanine [19]. Therefore, the cyano group in bromotyrosine alkaloids containing the phenylacetonitrile moiety is derived from the α-carbon and amino group of ʟ-tyrosine. On the other hand, the biosynthesis of nitrile with a cyanoformamide moiety remains unclear. Ceratinadin G (1) represents

Recent advances in transition-metal-free arylation reactions involving hypervalent iodine salts

• Ritu Mamgain,
• Kokila Sakthivel and
• Fateh V. Singh

Beilstein J. Org. Chem. 2024, 20, 2891–2920, doi:10.3762/bjoc.20.243

• conditions, the arylation of tyrosine methyl ester was also performed. The resulting compound was arylated at both O- and N-positions. The investigations were continued with the unsymmetric anisyl salts, and the results showed high chemoselectivity for N-arylation. Iodonium salts containing the anisyl

A review of recent advances in electrochemical and photoelectrochemical late-stage functionalization classified by anodic oxidation, cathodic reduction, and paired electrolysis

• Nian Li,
• Ruzal Sitdikov,
• Ajit Prabhakar Kale,
• Joost Steverlynck,
• Bo Li and
• Magnus Rueping

Beilstein J. Org. Chem. 2024, 20, 2500–2566, doi:10.3762/bjoc.20.214

• )–H functionalization C–N coupling reaction by developing an electrochemical method for the bioconjugation of tyrosine in proteins/polypeptides with phenothiazine residues, achieving excellent site- and chemoselectivity (Scheme 4a). This method was inspired by an earlier work from the Gouin group

• , respectively. However, other amino acids such as glycine (Gly), histidine (His), and tyrosine (Try) resulted in much lower yields (Scheme 52). 2 LSF via cathodic

Improved deconvolution of natural products’ protein targets using diagnostic ions from chemical proteomics linkers

• Andreas Wiest and
• Pavel Kielkowski

Beilstein J. Org. Chem. 2024, 20, 2323–2341, doi:10.3762/bjoc.20.199

• study several small molecule probes were used including propargylamine, a glutamine derivative, N6-propargyladenosine and a tyrosine derivative to document the thiotriazole formation during CuAAC. The two selected examples of adenosine and glutamine-derived diagnostic ions are shown in Figure 8E. Since

Natural resorcylic lactones derived from alternariol

• Joachim Podlech

Beilstein J. Org. Chem. 2024, 20, 2171–2207, doi:10.3762/bjoc.20.187

• ring was isolated from Ulocladium botrytis [219] and Microsphaeropsis olivacea [167]. Its structure was unambiguously confirmed by NMR spectroscopy and by total syntheses [44][220]. Ulocladol is a tyrosine kinase (p56lck) inhibitor leading to a reduction of enzyme activity to 7% at 0.02 µg/µL) [219

Regioselective alkylation of a versatile indazole: Electrophile scope and mechanistic insights from density functional theory calculations

• Pengcheng Lu,
• Luis Juarez,
• Paul A. Wiget,
• Weihe Zhang,
• Krishnan Raman and
• Pravin L. Kotian

Beilstein J. Org. Chem. 2024, 20, 1940–1954, doi:10.3762/bjoc.20.170

• the treatment of paroxysmal nocturnal hemoglobinuria, and CPI-637 (2), an inhibitor of both cyclic-AMP response element binding protein (CBP) and adenoviral E1A binding protein [14][15][16]. The N2-substituted indazole analogs pazopanib (3), an FDA-approved tyrosine kinase inhibitor used for the

Chemo-enzymatic total synthesis: current approaches toward the integration of chemical and enzymatic transformations

• Ryo Tanifuji and
• Hiroki Oguri

Beilstein J. Org. Chem. 2024, 20, 1693–1712, doi:10.3762/bjoc.20.151

• vitro enzymatic conversions (Scheme 9) [94]. The biosynthesis of 5 begins with the conversion of ʟ-tyrosine to tyrosine derivative 86 (Tyr*) by peroxygenase SfmD and the methyltransferases, SfmM2 and M3 [95][96]. Concurrently, two non-ribosomal peptide synthetase (NRPS) modules, SfmA and SfmB, catalyze

• to form bicyclic thioester 89 with incorporation of a stereogenic center at C1. The Red domain liberates bicyclic aldehyde 90 by reducing the resulting thioester 89, while the A domain again activates another molecule of tyrosine derivative 86, facilitating its loading onto the PCP domain. In the

• second cycle, the PS domain catalyzes the assembly of the tyrosine derivative and the liberated aldehyde 90 to form tetracyclic thioester 91 bearing an additional chiral center at C11. Subsequent reduction of 91 to aldehyde 92 by the Red domain and spontaneous cyclization would furnish 93, the

Methyltransferases from RiPP pathways: shaping the landscape of natural product chemistry

• Maria-Paula Schröder,
• Isabel P.-M. Pfeiffer and
• Silja Mordhorst

Beilstein J. Org. Chem. 2024, 20, 1652–1670, doi:10.3762/bjoc.20.147

• first RiPP to be isolated from Myxobacteria. It was specifically isolated from Chondromyces crocatus Cm C5. The core peptide is composed of only three amino acids: isoleucine, tyrosine, and tryptophan. It forms a tetracyclic core system that contains a tetrahydropyrroloindoline, which is unprecedented

• the tyrosine and isoleucine side chains, and then N-methylation is installed by UstM on the N-terminal tyrosine residue [91][92]. Another member of the dikaritin family is phomopsin. All phomopsins contain at least one N-methylated tyrosine. In vivo studies have attributed the MT activity to PhonM

Mining raw plant transcriptomic data for new cyclopeptide alkaloids

• Draco Kriger,
• Michael A. Pasquale,
• Brigitte G. Ampolini and
• Jonathan R. Chekan

Beilstein J. Org. Chem. 2024, 20, 1548–1559, doi:10.3762/bjoc.20.138

• . arabica, and Coffea eugenioides (Eugenioides coffee plant) all contained >30 unique transcripts for potential precursor peptides. The core sequences themselves were typically 4 or 5 amino acids in length and most often contained a tyrosine for cyclization. However, a few sequences appeared to have a

• (Figure 3 and Supporting Information File 2). Malvaceae family The Malvaceae family contains Hibiscus syriacus (Rose of Sharon), the only known producer of hibispeptin-type burpitides (Figure 3, hibispeptin B) [24][25]. These molecules contain a C–C linkage between the phenol derived from tyrosine and the

• . jasminoides that directly match this FFFY sequence (Figure 6A). Like other members of the Rubiaceae family [7][34], the tyrosine that forms the ether linkage remains intact, and not oxidatively decarboxylated as seen in members of the Rhamnaceae family. It is also predicted to contain a dimethylation at the N

Bioinformatic prediction of the stereoselectivity of modular polyketide synthase: an update of the sequence motifs in ketoreductase domain

• Changjun Xiang,
• Shunyu Yao,
• Ruoyu Wang and
• Lihan Zhang

Beilstein J. Org. Chem. 2024, 20, 1476–1485, doi:10.3762/bjoc.20.131

• possessed Q at this residue. This substitution can be reasonable, as it serves as a hydrogen bond donor to activate the β-keto moiety of a substrate [31][32]. Additionally, the presence of K (4), which activates the catalytic tyrosine, was more conserved in C2-type KRs. In general, C2-KRs show similarity to

Synthesis of 4-functionalized pyrazoles via oxidative thio- or selenocyanation mediated by PhICl₂ and NH₄SCN/KSeCN

• Jialiang Wu,
• Haofeng Shi,
• Xuemin Li,
• Jiaxin He,
• Chen Zhang,
• Fengxia Sun and
• Yunfei Du

Beilstein J. Org. Chem. 2024, 20, 1453–1461, doi:10.3762/bjoc.20.128

• -ranging biological activities. Specifically, representative examples include fasicularin (IV, Figure 1), which possesses cytotoxic properties [21] and psammaplin B (V, Figure 1), which shows antimicrobial and mild tyrosine kinase inhibition activities [22]. In addition, Se-aspirin (VI, Figure 1) has been

Novel analogues of a nonnucleoside SARS-CoV-2 RdRp inhibitor as potential antivirotics

• Luca Julianna Tóth,
• Kateřina Krejčová,
• Milan Dejmek,
• Eva Žilecká,
• Blanka Klepetářová,
• Lenka Poštová Slavětínská,
• Evžen Bouřa and
• Radim Nencka

Beilstein J. Org. Chem. 2024, 20, 1029–1036, doi:10.3762/bjoc.20.91

• viral replication in cell-based antiviral assays [24]. That study highlighted the beneficial role of the tyrosine residue and the indispensable role of the C-2 substitution. In this work, we report the synthesis and biological evaluation of further analogues of HeE1-2Tyr (1) against the SARS-CoV-2 RdRp

• ], and thus avoiding the use of base, leading to the desired intermediate 14 in good yield. Compound 14 was then coupled with ʟ-tyrosine methyl ester followed by deprotection of the amino acid carboxyl group by LiOH⋅H2O. As in the previous base-mediated saponification, here we also received a product of

Identification of the p-coumaric acid biosynthetic gene cluster in Kutzneria albida: insights into the diazotization-dependent deamination pathway

• Seiji Kawai,
• Akito Yamada,
• Yohei Katsuyama and
• Yasuo Ohnishi

Beilstein J. Org. Chem. 2024, 20, 1–11, doi:10.3762/bjoc.20.1

• intermediate in flavonoid biosynthesis and is much more ubiquitous than avenalumic acid. In general, p-coumaric acid is synthesized by phenylalanine ammonia-lyase and cinnamate 4-hydroxylase from phenylalanine or by a tyrosine ammonia-lyase from tyrosine [26]. However, the Cma system synthesizes p-coumaric

Photoredox catalysis enabling decarboxylative radical cyclization of γ,γ-dimethylallyltryptophan (DMAT) derivatives: formal synthesis of 6,7-secoagroclavine

• Alessio Regni,
• Francesca Bartoccini and
• Giovanni Piersanti

Beilstein J. Org. Chem. 2023, 19, 918–927, doi:10.3762/bjoc.19.70

• carboxylate anion and/or reduction of the corresponding N-hydroxyphthalimide- (NHPI)-derived redox-active ester, although it destroys their stereochemical information [46][47][48][49][50][51]. In addition, the side-chains of aromatic amino acids (mainly electron-rich tryptophan and tyrosine) can be

Eschenmoser coupling reactions starting from primary thioamides. When do they work and when not?

• Lukáš Marek,
• Jiří Váňa,
• Jan Svoboda and
• Jiří Hanusek

Beilstein J. Org. Chem. 2023, 19, 808–819, doi:10.3762/bjoc.19.61

• potential in the synthesis of various tyrosine kinase inhibitors, including hesperadin and the approved drug nintedanib. The key step of the synthesis involves the Eschenmoser coupling reaction (ECR) between a substituted 3-bromooxindole 1 and appropriate primary, secondary or tertiary thioamides which

Combretastatins D series and analogues: from isolation, synthetic challenges and biological activities

• Jorge de Lima Neto and
• Paulo Henrique Menezes

Beilstein J. Org. Chem. 2023, 19, 399–427, doi:10.3762/bjoc.19.31

• elucidate the chemical structures of the isolated compounds [19]. 2 Synthesis 2.1 Biosynthetic pathway In the literature, there are two possible biosynthetic pathways for the formation of these compounds. The first one was proposed by Pettit and co-workers [16][17] based on tyrosine as the starting material

• . An o-phenolic coupling between two units of tyrosine furnishes the intermediate Int-1, which by deamination, selective reduction of one of the carboxylate groups, macrolactonization, and subsequent structural modifications would lead to the aforementioned combretastatins D (Scheme 1). The second

• pathway was proposed by Ponnapalli and co-workers [14] and was initially based on the conversion of phenylalanine into tyrosine by phenylalanine hydroxylase and m-tyrosine via radical hydroxylation (Scheme 2). Subsequent deamination of tyrosine, with concomitant hydroxylation/deamination of m-tyrosine

Combining the best of both worlds: radical-based divergent total synthesis

• Kyriaki Gennaiou,
• Antonios Kelesidis,
• Maria Kourgiantaki and
• Alexandros L. Zografos

Beilstein J. Org. Chem. 2023, 19, 1–26, doi:10.3762/bjoc.19.1

• structure of spirolactam 157 to access the family (Scheme 13). To synthesize it, they conjectured that a tyrosine amino acid, a cyclohexadione derivative, and a nonracemic dehydroalanine derivative could be effectively combined to build the core structure, using an already known iridium-photocatalyzed

• radical reaction [87]. Indeed, when ʟ-tyrosine methyl ester (154), 1,4-cyclohexanedione monoethylene acetal (155), and dehydroalanine derivative 156 were allowed to react in the presence of TFA, molecular sieves, 1 mol % of fac-Ir(ppy)3, and Hantzsch ester under blue LED irradiation at 40 W, this resulted

A new route for the synthesis of 1-deazaguanine and 1-deazahypoxanthine

• Raphael Bereiter,
• Marco Oberlechner and
• Ronald Micura

Beilstein J. Org. Chem. 2022, 18, 1617–1624, doi:10.3762/bjoc.18.172

• , glycogen synthase kinase 3 (GSK-3), leucine-rich repeat kinase 2 (LRRK2), tyrosine phosphorylation-regulated kinase-1A (DYRK1A) and CDC2-like kinase 1 (CLK1), and fatty acid amide hydrolase (FAAH) [4]). Similar properties were ascertained for 1-deazapurine derivatives (imidazo[4,5-b]pyridines) and

Isolation and biosynthesis of daturamycins from Streptomyces sp. KIB-H1544

• Yin Chen,
• Jinqiu Ren,
• Ruimin Yang,
• Jie Li,
• Sheng-Xiong Huang and
• Yijun Yan

Beilstein J. Org. Chem. 2022, 18, 1009–1016, doi:10.3762/bjoc.18.101

• since the 1960s [15][16]. Stable-isotope labeling experiments confirmed that ʟ-tyrosine or ʟ-phenylalanine are involved in the biosynthesis of p-terphenyl as metabolic origin. The precursors undergoing deamination are converted to the corresponding α-keto acid, then a quinone intermediate arises by