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Search for "scaffolds" in Full Text gives 585 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Thiazolidinones: novel insights from microwave synthesis, computational studies, and potentially bioactive hybrids

  • Luan A. Martinho,
  • Victor H. J. G. Praciano,
  • Guilherme D. R. Matos,
  • Claudia C. Gatto and
  • Carlos Kleber Z. Andrade

Beilstein J. Org. Chem. 2025, 21, 2618–2636, doi:10.3762/bjoc.21.203

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  • scaffolds for several synthetic or natural compounds [5]. Five-membered heterocycles include the thiazolidinone nucleus, characterized by two heteroatoms and a carbonyl group on the fourth carbon, as seen in compounds like rhodanine and thiazolidine-2,4-dione derivatives (Figure 1). These privileged
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Published 28 Nov 2025

Visible-light-driven NHC and organophotoredox dual catalysis for the synthesis of carbonyl compounds

  • Vasudevan Dhayalan

Beilstein J. Org. Chem. 2025, 21, 2584–2603, doi:10.3762/bjoc.21.200

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  • transformations. Previous reports displayed various research groups successfully designed and prepared a variety of triazolium-based NHCs, eventually leading to the development of chiral NHC scaffolds by Knight and Leeper [17], followed by the remarkable contributions of Bode [18], Rovis [19], Glorius [20
  • production of ketone scaffolds, including drug moieties. The organocatalyzed acylation proceeds with excellent site selectivity and broad functional group tolerance of alkanes such as F, Cl, Br, I, CN, CF3, Me, and OMe. The reaction was achieved between acyl fluoride 4 and highly substituted alkane 7 in the
  • existing metal-catalyzed C–H bond functionalization methods (Scheme 3) [53]. Recently, Scheidt et al. discovered an NHC/organic photoredox-catalyzed three-component coupling reaction for the efficient and novel preparation of γ-aryloxy ketone scaffolds 12. This transformation builds on the emerging field
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Published 21 Nov 2025

Synthesis and characterization of a isothiouronium-calix[4]arene derivative: self-assembly and anticancer activity

  • Giuseppe Granata,
  • Loredana Ferreri,
  • Claudia Giovanna Leotta,
  • Giovanni Mario Pitari and
  • Grazia Maria Letizia Consoli

Beilstein J. Org. Chem. 2025, 21, 2535–2541, doi:10.3762/bjoc.21.195

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  • and precise than current treatments. Numerous multivalent constructs have been reported in literature, both as compounds with intrinsic anticancer activity [4] and nanocarriers for anticancer drug delivery [5][6]. In the development of multivalent compounds, macrocyclic scaffolds such as cyclodextrins
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Published 14 Nov 2025

Isoorotamide-based peptide nucleic acid nucleobases with extended linkers aimed at distal base recognition of adenosine in double helical RNA

  • Grant D. Walby,
  • Brandon R. Tessier,
  • Tristan L. Mabee,
  • Jennah M. Hoke,
  • Hallie M. Bleam,
  • Angelina Giglio-Tos,
  • Emily E. Harding,
  • Vladislavs Baskevics,
  • Martins Katkevics,
  • Eriks Rozners and
  • James A. MacKay

Beilstein J. Org. Chem. 2025, 21, 2513–2523, doi:10.3762/bjoc.21.193

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  • was comparable to the selectivity of E and these scaffolds may present a lead for future nucleobase designs. The study further demonstrated a conflict between linker flexibility and triplex formation. However, the results point to the importance of entropy and related pre-organization of PNA bases for
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Published 12 Nov 2025

Palladium-catalyzed regioselective C1-selective nitration of carbazoles

  • Vikash Kumar,
  • Jyothis Dharaniyedath,
  • Aiswarya T P,
  • Sk Ariyan,
  • Chitrothu Venkatesh and
  • Parthasarathy Gandeepan

Beilstein J. Org. Chem. 2025, 21, 2479–2488, doi:10.3762/bjoc.21.190

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  • are ubiquitous and privileged heterocyclic scaffolds in various functional organic materials and naturally occurring products. Although extensive efforts have focused on developing synthetic strategies toward carbazole derivatives, direct regioselective functionalization of the carbazole core remains
  • functionalization of carbazoles via C–H activation [48][49][50][51][52][53][54][55][56][57][58][59][60][61]. Among the variously substituted carbazole scaffolds, nitro-substituted carbazoles exhibit a diverse range of medicinal properties and serve as key starting materials for the synthesis of bioactive compounds
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Published 10 Nov 2025

The high potential of methyl laurate as a recyclable competitor to conventional toxic solvents in [3 + 2] cycloaddition reactions

  • Ayhan Yıldırım and
  • Mustafa Göker

Beilstein J. Org. Chem. 2025, 21, 2389–2415, doi:10.3762/bjoc.21.184

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  • scaffolds. From the standpoint of organic chemistry, it is evident that these compounds can be efficiently converted into a variety of versatile organic intermediates through the application of ring-opening reactions [49][50][51][52]. In addition to the aforementioned useful properties, the current methods
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Published 05 Nov 2025

Recent advances in Norrish–Yang cyclization and dicarbonyl photoredox reactions for natural product synthesis

  • Peng-Xi Luo,
  • Jin-Xuan Yang,
  • Shao-Min Fu and
  • Bo Liu

Beilstein J. Org. Chem. 2025, 21, 2315–2333, doi:10.3762/bjoc.21.177

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  • reactivity modes and expand the structural diversity of accessible natural product scaffolds. Additionally, the highly reactive strained four-membered rings generated from these reactions present exciting opportunities for further functionalization. Studying their downstream transformations – particularly
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Published 30 Oct 2025

Pathway economy in cyclization of 1,n-enynes

  • Hezhen Han,
  • Wenjie Mao,
  • Bin Lin,
  • Maosheng Cheng,
  • Lu Yang and
  • Yongxiang Liu

Beilstein J. Org. Chem. 2025, 21, 2260–2282, doi:10.3762/bjoc.21.173

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  • synthetic intermediates, and used to successfully modify diverse bioactive scaffolds via late-stage functionalization, collectively demonstrating the method’s synthetic utility. In 2025, the Das group developed a palladium-catalyzed cycloisomerization of 2-alkynylbenzoate-cyclohexadienone that enables
  • derivatives 31 (Scheme 7, path b). This work provided a novel approach for constructing substituted naphthalene and indene frameworks via gold-catalyzed cycloisomerization of 1,5-enynes. In 2016, Liu et al. achieved the stereoselective syntheses of furofuran and furopyran scaffolds from propargyl vinyl ethers
  • heterocyclic scaffolds, which established a versatile platform for synthesizing structurally diverse indoline frameworks. Ligand-controlled cyclization of 1,n-enynes The core function of catalyst ligands lies in their ability to precisely modulate catalyst performance through electronic and steric effects. The
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Published 27 Oct 2025

Synthesis of triazolo- and tetrazolo-fused 1,4-benzodiazepines via one-pot Ugi–azide and Cu-free click reactions

  • Xiaoming Ma,
  • Zijie Gao,
  • Jiawei Niu,
  • Wentao Shao,
  • Shenghu Yan,
  • Sai Zhang and
  • Wei Zhang

Beilstein J. Org. Chem. 2025, 21, 2202–2210, doi:10.3762/bjoc.21.167

Graphical Abstract
  • heterocyclic scaffolds to obtain biologically interesting compounds (Scheme 1) [35][36][37][38][39][40][41]. The development of methods for the synthesis of triazole, tetrazole, piperazinone, and 1,4-benzodiazepine motifs are attractive from both synthetic and medicinal chemistry considerations [42][43][44][45
  • scaffolds in a highly efficient manner. It was found that brominated azides do not undergo lactamization under the current conditions which presents an opportunity for further optimization of reaction conditions to expand the scope. Experimental General procedure for synthesis of analogs 7 and 8 A solution
  • of compounds 6a (red) and 8a (blue). Ugi–azide reaction for the synthesis of 1,5-DS-T-containing heterocycles. Proposed Ugi–azide-initiated synthesis of polyheterocyclic scaffolds 7 and 8. 4-CR vs stepwise Ugi–azide reactions for the synthesis of 7a. Synthesis of benzodiazepines 7a–k. Reaction
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Published 17 Oct 2025

C2 to C6 biobased carbonyl platforms for fine chemistry

  • Jingjing Jiang,
  • Muhammad Noman Haider Tariq,
  • Florence Popowycz,
  • Yanlong Gu and
  • Yves Queneau

Beilstein J. Org. Chem. 2025, 21, 2103–2172, doi:10.3762/bjoc.21.165

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Published 15 Oct 2025

Discovery of cytotoxic indolo[1,2-c]quinazoline derivatives through scaffold-based design

  • Daniil V. Khabarov,
  • Valeria A. Litvinova,
  • Lyubov G. Dezhenkova,
  • Dmitry N. Kaluzhny,
  • Alexander S. Tikhomirov and
  • Andrey E. Shchekotikhin

Beilstein J. Org. Chem. 2025, 21, 2062–2071, doi:10.3762/bjoc.21.161

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  • heterocyclic scaffolds are widely used in the treatment of various diseases, making them a common focus of research [1]. A substantial part of these compounds incorporate five- or six-membered nitrogen heterocycles. The indole and quinazoline cores represent two pharmacologically significant heterocyclic
  • systems, exhibiting a wide range of biological activity, high level of druglikeness and broad opportunities for derivatizations, that make them privileged scaffolds in drug discovery [2][3]. The pharmaceutical significance of indole and quinazoline rings is evident by numerous FDA-approved drugs across
  • structural fusion of indole and quinazoline pharmacophores offers exceptional opportunities for designing new therapeutic agents, combining the proven bioactivities of both privileged scaffolds. Chemical ways for the synthesis of indolo[1,2-c]quinazolines (Figure 1, top) are numerous and cover different
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Published 13 Oct 2025

Measuring the stereogenic remoteness in non-central chirality: a stereocontrol connectivity index for asymmetric reactions

  • Ivan Keng Wee On,
  • Yu Kun Choo,
  • Sambhav Baid and
  • Ye Zhu

Beilstein J. Org. Chem. 2025, 21, 1995–2006, doi:10.3762/bjoc.21.155

Graphical Abstract
  • important in pharmaceuticals, catalysts, and advanced materials due to their unique stereogenic scaffolds and associated properties. Consequently, synthetic chemists have been pursuing molecules featuring these forms of non-central chirality, where the stereogenic elements are not localized on a single
  • within three-dimensional molecular frameworks that restrict conformational freedom. The geometric scaffolds can be a central atom, an axis, or a plane, and the combination and spatial arrangement of chemically distinct substituents establish the stereogenicity. Therefore, despite the apparent differences
  • among these scaffolds, the various types of chirality are permutations of substituents on diverse stereogenic elements (Scheme 1C). Although this analysis offers a unified view of chirality, the realization of these chiral systems through asymmetric synthesis is far from trivial. Stereogenic compounds
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Published 30 Sep 2025

Rhodium-catalysed connective synthesis of diverse reactive probes bearing S(VI) electrophilic warheads

  • Scott Rice,
  • Julian Chesti,
  • William R. T. Mosedale,
  • Megan H. Wright,
  • Stephen P. Marsden,
  • Terry K. Smith and
  • Adam Nelson

Beilstein J. Org. Chem. 2025, 21, 1924–1931, doi:10.3762/bjoc.21.150

Graphical Abstract
  • Collins and Stuart Warriner for their support and assistance in this work. This work is based on the doctoral theses of Scott Rice (“Synthesis of Novel Polyfunctional 3D Scaffolds for Drug Discovery”, University of Leeds, 2021) and Julian Chesti (“Modular Synthesis and Biological Evaluation of
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Published 17 Sep 2025

Stereoselective electrochemical intramolecular imino-pinacol reaction: a straightforward entry to enantiopure piperazines

  • Margherita Gazzotti,
  • Fabrizio Medici,
  • Valerio Chiroli,
  • Laura Raimondi,
  • Sergio Rossi and
  • Maurizio Benaglia

Beilstein J. Org. Chem. 2025, 21, 1897–1908, doi:10.3762/bjoc.21.147

Graphical Abstract
  • scaffolds that are commonly used as chiral ligands. In this context we report the development of a more sustainable method – which avoids the use of lead bromide or lead electrodes – employing an undivided cell with two glassy carbon electrodes for the electroreductive intramolecular coupling of aromatic
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Published 12 Sep 2025

Chiral phosphoric acid-catalyzed asymmetric synthesis of helically chiral, planarly chiral and inherently chiral molecules

  • Wei Liu and
  • Xiaoyu Yang

Beilstein J. Org. Chem. 2025, 21, 1864–1889, doi:10.3762/bjoc.21.145

Graphical Abstract
  • framework of the diol precursors, predominantly axially chiral structures such as BINOL, H8-BINOL, SPINOL and VAPOL scaffolds, which are widely used in the development of CPA catalysts. Furthermore, the ortho-aryl substitutions of the CPA catalyst can efficiently modulate the stereochemical and electronic
  • versatility of this method in the asymmetric synthesis of diverse chiral molecular structures. Substituted [2.2]paracyclophanes represent another class of conformationally rigid, planarly chiral molecules, which have emerged as versatile scaffolds for developing chiral catalysts, ligands and functional
  • synthesis of helically chiral, planarly chiral and inherently chiral molecules. General structure of CPAs and selected CPAs with various chiral scaffolds. Representative elements of molecular chirality. CPA-catalyzed asymmetric synthesis of azahelicenes via Fischer indole synthesis. CPA-catalyzed asymmetric
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Published 10 Sep 2025

Systematic pore lipophilization to enhance the efficiency of an amine-based MOF catalyst in the solvent-free Knoevenagel reaction

  • Pricilla Matseketsa,
  • Margret Kumbirayi Ruwimbo Pagare and
  • Tendai Gadzikwa

Beilstein J. Org. Chem. 2025, 21, 1854–1863, doi:10.3762/bjoc.21.144

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  • functional groups are isolated together in confined space [7][8][9]. In the solid state, the generation of such multifunctional cavities has been pursued upon nanoporous scaffolds that include polymers of intrinsic microporosity (PIMs) [10][11][12][13], mesoporous silica materials (MSMs) [14][15][16][17
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Published 09 Sep 2025

Fe-catalyzed efficient synthesis of 2,4- and 4-substituted quinolines via C(sp2)–C(sp2) bond scission of styrenes

  • Prafull A. Jagtap,
  • Manish M. Petkar,
  • Vaishnavi R. Sawant and
  • Bhalchandra M. Bhanage

Beilstein J. Org. Chem. 2025, 21, 1799–1807, doi:10.3762/bjoc.21.142

Graphical Abstract
  • hypothesis, we commenced our investigation by employing arylamine 1a and styrene (2a) as model substrates. The optimized reaction conditions are presented in Table 1. Building upon our previous studies, where we investigated how solvent selection can influence the selective formation of quinoline scaffolds
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Published 05 Sep 2025

[3 + 2] Cycloaddition of thioformylium methylide with various arylidene-azolones in the synthesis of 7-thia-3-azaspiro[4.4]nonan-4-ones

  • Daniil I. Rudik,
  • Irina V. Tiushina,
  • Anatoly I. Sokolov,
  • Alexander Yu. Smirnov,
  • Alexander R. Romanenko,
  • Alexander A. Korlyukov,
  • Andrey A. Mikhaylov and
  • Mikhail S. Baranov

Beilstein J. Org. Chem. 2025, 21, 1791–1798, doi:10.3762/bjoc.21.141

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  • would be of help in further drug design of spirocyclic scaffolds. Single crystal X-ray analysis for the compounds 6e (A), 7d (B), 8e (C) and 9e (D). Atoms are shown as thermal ellipsoids at 50% probability. All hydrogen atoms, except the one at the stereogenic center, are omitted for clarity. Synthetic
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Published 05 Sep 2025

Approaches to stereoselective 1,1'-glycosylation

  • Daniele Zucchetta and
  • Alla Zamyatina

Beilstein J. Org. Chem. 2025, 21, 1700–1718, doi:10.3762/bjoc.21.133

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  • -promoted glycosylation reactions with α-lactol acceptors 176 and 178, respectively [123]. These nonreducing disaccharides were employed as scaffolds for the synthesis of immunomodulatory glycolipids – TLR4 agonists with picomolar potency [124]. Conclusion Approaches to 1,1'-glycosylation can be rationally
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Published 27 Aug 2025

Catalytic asymmetric reactions of isocyanides for constructing non-central chirality

  • Jia-Yu Liao

Beilstein J. Org. Chem. 2025, 21, 1648–1660, doi:10.3762/bjoc.21.129

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  • of structurally diverse scaffolds featuring axial, planar, helical, and inherent chirality. Herein, we summarize the exciting achievements in this rapidly evolving field. These elegant examples have been organized and presented based on the reaction type as well as the resulting chirality form
  • attention due to its broad applications in various fields, including but not limited to drug discovery, asymmetric catalysis, and materials science (Figure 1b). Consequently, the development of efficient and stereoselective methods for assembling such scaffolds with respect to structural diversity has
  • cyclization of functionalized phenyl isocyanides, guided by DFT calculations (Scheme 2b) [29]. Three types of isocyanides (10–12) were evaluated in reactions with aryl iodides, affording indole-fused N-heteroaryl scaffolds 13–15, featuring either a C–C or C–N stereogenic axis, in moderate-to-high yields with
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Perspective
Published 19 Aug 2025

Heterologous biosynthesis of cotylenol and concise synthesis of fusicoccane diterpenoids

  • Ye Yuan,
  • Zhenhua Guan,
  • Xue-Jie Zhang,
  • Nanyu Yao,
  • Wenling Yuan,
  • Yonghui Zhang,
  • Ying Ye and
  • Zheng Xiang

Beilstein J. Org. Chem. 2025, 21, 1489–1495, doi:10.3762/bjoc.21.111

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  • enzymatic terpene cyclization and chemical synthesis [30][31][32][33]. Briefly, the carbon scaffolds are forged by terpene cyclases, followed by concise chemical transformations to yield the desired natural products. Here, we describe heterologous biosynthesis of cotylenol by engineering the biosynthetic
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Published 21 Jul 2025

Microwave-enhanced additive-free C–H amination of benzoxazoles catalysed by supported copper

  • Andrei Paraschiv,
  • Valentina Maruzzo,
  • Filippo Pettazzi,
  • Stefano Magliocco,
  • Paolo Inaudi,
  • Daria Brambilla,
  • Gloria Berlier,
  • Giancarlo Cravotto and
  • Katia Martina

Beilstein J. Org. Chem. 2025, 21, 1462–1476, doi:10.3762/bjoc.21.108

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  • -amination of benzoxazoles by transition-metal-catalysed reactions that traditionally involve aryl halide scaffolds [11][12][13][14]. However, these procedures entail disadvantages that need to be overcome if green chemistry criteria are to be met; high temperatures, long reaction times, the need for ligands
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Published 15 Jul 2025

Advances in nitrogen-containing helicenes: synthesis, chiroptical properties, and optoelectronic applications

  • Meng Qiu,
  • Jing Du,
  • Nai-Te Yao,
  • Xin-Yue Wang and
  • Han-Yuan Gong

Beilstein J. Org. Chem. 2025, 21, 1422–1453, doi:10.3762/bjoc.21.106

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  • versatile scaffolds for chiral optoelectronic applications. The incorporation of nitrogen enables precise modulation of electronic structures, redox characteristics, and intermolecular interactions, thereby enhancing performance in circularly polarized luminescence (CPL), thermally activated delayed
  • (MR-TADF) emitters to date. In 2023, the same group introduced the first deep-blue chiral MR-TADF emitters based on heterohelicene scaffolds 41a–c [56]. These compounds exhibited sharp emissions at 440–444 nm in solution and 445–449 nm in doped films, with emission bandwidths as narrow as 23 nm and
  • [5]helicene (compound 57b) by coupling two 12H-benzo[b]phenoxazine (BPO) units and systematically compared it to its N,N-analogue (compound 57a) derived from 13H-dibenzo[b,i]phenoxazine (DBPO) scaffolds [72] (Table 19). Compound 57b was obtained in significantly higher yield and, like compound 57a
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Published 11 Jul 2025

High-pressure activation for the solvent- and catalyst-free syntheses of heterocycles, pharmaceuticals and esters

  • Kelsey Plasse,
  • Valerie Wright,
  • Guoshu Xie,
  • R. Bernadett Vlocskó,
  • Alexander Lazarev and
  • Béla Török

Beilstein J. Org. Chem. 2025, 21, 1374–1387, doi:10.3762/bjoc.21.102

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  • conducting polymers or scaffolds for drug synthesis. Among them, 1,3-dihydrobenzimidazoles are widely found in many materials, drug candidates, and catalysts. For instance, they can be used in organic light-emitting diodes (OLEDs) [38], as water-soluble antitrypanosomatid agents [39], or in the synthesis of
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Published 02 Jul 2025

Recent advances and future challenges in the bottom-up synthesis of azulene-embedded nanographenes

  • Bartłomiej Pigulski

Beilstein J. Org. Chem. 2025, 21, 1272–1305, doi:10.3762/bjoc.21.99

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  • design beyond all-hexagon polycyclic aromatic hydrocarbons (PAHs). Among these, π-conjugated scaffolds featuring embedded azulene units have gained considerable attention due to their unique optical and electronic properties. This review provides an overview of representative azulene-embedded
  • gap, aromaticity of azulene subunit and anti-Kasha’s emission from higher excited states. In such cases, the azulene unit merely acts as a linker within a more complex benzenoid framework. This review covers all types of azulene-embedded molecular scaffolds, regardless of whether they contain a
  • scaffolds of this type. Given the rapid progress in this field, with nearly half of the cited works published since 2020, this review focuses primarily on purely hydrocarbon structures, with less emphasis on heteroatom-containing molecules. Typically, only the final synthetic steps leading to the fused
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Published 26 Jun 2025
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