A toolbox of molecular photoswitches to modulate the CXCR3 chemokine receptor with light

• Xavier Gómez-Santacana,
• Sabrina M. de Munnik,
• Tamara A. M. Mocking,
• Niels J. Hauwert,
• Shanliang Sun,
• Prashanna Vijayachandran,
• Iwan J. P. de Esch,
• Henry F. Vischer,
• Maikel Wijtmans and
• Rob Leurs

Beilstein J. Org. Chem. 2019, 15, 2509–2523, doi:10.3762/bjoc.15.244

• advanced intermediate 28b (Scheme 3), which was subjected to an aromatic nucleophilic substitution with potassium phthalimide prepared in situ from 29 and K2CO3. Presumably due to the alkaline medium, the phthalimide ring was partially opened as detected by HPLC–MS. Upon attempted re-closing under reflux

Synthesis of a dihalogenated pyridinyl silicon rhodamine for mitochondrial imaging by a halogen dance rearrangement

• Jessica Matthias,
• Thines Kanagasundaram,
• Klaus Kopka and
• Carsten S. Kramer

Beilstein J. Org. Chem. 2019, 15, 2333–2343, doi:10.3762/bjoc.15.226

• at the bromine via a nucleophilic substitution, we explored also if the ester analogue tert-butyl 5-bromo-6-chloronicotinate could undergo a HD reaction with subsequent xanthone addition. The reaction did not lead to any product, neither with n-BuLi nor with t-BuLi. However, it is noteworthy that no

Fluorescent phosphorus dendrimers excited by two photons: synthesis, two-photon absorption properties and biological uses

• Anne-Marie Caminade,
• Artem Zibarov,
• Eduardo Cueto Diaz,
• Aurélien Hameau,
• Maxime Klausen,
• Kathleen Moineau-Chane Ching,
• Jean-Pierre Majoral,
• Jean-Baptiste Verlhac,
• Olivier Mongin and
• Mireille Blanchard-Desce

Beilstein J. Org. Chem. 2019, 15, 2287–2303, doi:10.3762/bjoc.15.221

• N3P3Cl6 [33], the first step is the nucleophilic substitution with 4-hydroxybenzaldehyde in basic conditions. The second step comprises the condensation reaction of the aldehyde terminal functions with the phosphorhydrazide H2NNMeP(S)Cl2. This reaction affords the first generation (G1) dendrimer, having

1,2,3-Triazolium macrocycles in supramolecular chemistry

• Mastaneh Safarnejad Shad,
• Pulikkal Veettil Santhini and
• Wim Dehaen

Beilstein J. Org. Chem. 2019, 15, 2142–2155, doi:10.3762/bjoc.15.211

• -position of the triazoles (triazolium), and nucleophilic substitution of halogen can be used to introduce chalcogens (Se, Te). Thus, the corresponding triazolium macrocycles can take advantage respectively of halogen and chalcogen bonding as part of the molecular recognition (vide infra). In this review

Synthesis and properties of sulfur-functionalized triarylmethylium, acridinium and triangulenium dyes

• Marco Santella,
• Eduardo Della Pia,
• Jakob Kryger Sørensen and
• Bo W. Laursen

Beilstein J. Org. Chem. 2019, 15, 2133–2141, doi:10.3762/bjoc.15.210

• functionalities were synthesized and their optical properties were studied. The sulfur functionalities were introduced by aromatic nucleophilic substitution of methoxy groups in triarylmethylium cations with ethanethiol followed by partial or full ring closure of the ortho positions with nitrogen or oxygen

• of the ethylthiol substituents. For the triangulenium derivatives significant fluorescence was observed (Φf = 0.1 to Φf = 0.3). Keywords: acridinium dyes; aromatic nucleophilic substitution; fluorescent dyes; sulfur-functionalized dyes; triangulenium dyes; triarylmethylium; Introduction The design

• -substituted triarylmethylium salts as simple precursors allowing both introduction of dialkylamino donor groups and formation of the heterocyclic triangulenium ring systems. These characteristic types of aromatic nucleophilic substitution (SNAr) reactions are exemplified by the synthesis of A3-ADOTA+ (Figure

Recent advances on the transition-metal-catalyzed synthesis of imidazopyridines: an updated coverage

• Gagandeep Kour Reen,
• Ashok Kumar and
• Pratibha Sharma

Beilstein J. Org. Chem. 2019, 15, 1612–1704, doi:10.3762/bjoc.15.165

• ) [119]. In this reaction, iodine promoted the formation of iodo-intermediate 98 with a carbonyl compound that underwent nucleophilic substitution with 2-AP 3. CuO played multiple roles in this reaction. Firstly it acts as an oxidizing agent to convert molecular iodine to the reactive iodonium ion (I

Synthesis of 9-O-arylated berberines via copper-catalyzed C_Ar–O coupling reactions

• Qiaoqiao Teng,
• Xinhui Zhu,
• Qianqian Guo,
• Weihua Jiang,
• Jiang Liu and
• Qi Meng

Beilstein J. Org. Chem. 2019, 15, 1575–1580, doi:10.3762/bjoc.15.161

• temperature, during which 9-O-methyl cleavage occurs. The resulting berberrubine (BBRB) then acts as a good precursor to 9-O-substituted derivatives through nucleophilic substitution reactions with alkyl halides (Scheme 1). By this route, not only long-chain alkyl substituents were installed, but also more

Synthesis of ([1,2,4]triazolo[4,3-a]pyridin-3-ylmethyl)phosphonates and their benzo derivatives via 5-exo-dig cyclization

• Aleksandr S. Krylov,
• Artem A. Petrosian,
• Julia L. Piterskaya,
• Nataly I. Svintsitskaya and
• Albina V. Dogadina

Beilstein J. Org. Chem. 2019, 15, 1563–1568, doi:10.3762/bjoc.15.159

• ; Introduction Due to the high polarization of the push–pull triple bond, haloacetylenes show high reactivity in nucleophilic substitution reactions. Our systematic studies of the reactions of chloroethynylphosphonates with various nucleophilic reagents have recently revealed a new direction of this reaction

• nucleophilic substitution of chlorine in the chloroethynylphosphonate to form ynamine intermediate A, isomerization of which provides ketenimine B. Further formation of the imine tautomer C enables an intramolecular 5-exo-dig cyclization to furnish the title [1,2,4]triazolo[4,3-a]pyridines (Scheme 6

Multicomponent reactions (MCRs): a useful access to the synthesis of benzo-fused γ-lactams

• Edorta Martínez de Marigorta,
• Jesús M. de Los Santos,
• Ana M. Ochoa de Retana,
• Javier Vicario and
• Francisco Palacios

Beilstein J. Org. Chem. 2019, 15, 1065–1085, doi:10.3762/bjoc.15.104

• similar way to that described in Scheme 3. In this case, the coupled alkyne moiety is again activated by Cu(I) and then base-promoted cyclization occurs. A new copper complex formation with the alkene analogue to 13 (see Scheme 3) facilitates the aromatic nucleophilic substitution by indole or pyrrole

Stereo- and regioselective hydroboration of 1-exo-methylene pyranoses: discovery of aryltriazolylmethyl C-galactopyranosides as selective galectin-1 inhibitors

• Alexander Dahlqvist,
• Axel Furevi,
• Niklas Warlin,
• Hakon Leffler and
• Ulf J. Nilsson

Beilstein J. Org. Chem. 2019, 15, 1046–1060, doi:10.3762/bjoc.15.102

• mesyl chloride in pyridine at 0 °C to give 2-deoxy-1-mesylgalactoheptulose 8 (91%), followed by a nucleophilic substitution reaction with sodium azide in dimethylformamide to give the azide 9 in good yield (90%) [26]. The azide 9 was reacted with a panel of substituted ethynyl arenes to give

Azologization of serotonin 5-HT₃ receptor antagonists

• Karin Rustler,
• Galyna Maleeva,
• Piotr Bregestovski and
• Burkhard König

Beilstein J. Org. Chem. 2019, 15, 780–788, doi:10.3762/bjoc.15.74

• . Scheme 5 reflects the synthesis of the azo-extended thiomethylpurine 23 starting with the synthesis of hydroxymethylazobenzene 19 [72] in a Baeyer [62]–Mills [63] reaction and subsequent nucleophilic substitution using cyanuric chloride (20) [73] providing chloromethyl azobenzene 21. The introduction of

• photochromic derivatives with varying electronic and thus photochromic properties. The respective arylamines 13a–c were converted into their corresponding hydrazines 14a–c via diazonium-salt formation using sodium nitrite and subsequent reduction using tin(II) chloride [70]. The following nucleophilic

• substitution at a chloro-substituted purine (15a,b) or thienopyrimidine (15c), respectively, and subsequent oxidation of the hydrazine moiety afforded the corresponding azobenzene derivatives 16a–d [71]. Synthesis of azobenzene-extended thiopurine derivatives To further tune the photochromism and compare the

Homo- and hetero-difunctionalized β-cyclodextrins: Short direct synthesis in gram scale and analysis of regiochemistry

• Gábor Benkovics,
• Mihály Bálint,
• Éva Fenyvesi,
• Erzsébet Varga,
• Szabolcs Béni,
• Konstantina Yannakopoulou and
• Milo Malanga

Beilstein J. Org. Chem. 2019, 15, 710–720, doi:10.3762/bjoc.15.66

• developed by Fujita et al. by introducing customized capping reagents for β-CD [10]. Tabushi and co-workers developed a series of capping agents providing 6A,6B-, 6A,6C-, or 6A,6D-selectivity on β-CD (Scheme 1) [11][12]. The cap could be subsequently removed by a suitable nucleophilic substitution to afford

Study on the regioselectivity of the N-ethylation reaction of N-benzyl-4-oxo-1,4-dihydroquinoline-3-carboxamide

• Pedro N. Batalha,
• Luana da S. M. Forezi,
• Maria Clara R. Freitas,
• Nathalia M. de C. Tolentino,
• Ednilsom Orestes,
• José Walkimar de M. Carneiro,
• Fernanda da C. S. Boechat and
• Maria Cecília B. V. de Souza

Beilstein J. Org. Chem. 2019, 15, 388–400, doi:10.3762/bjoc.15.35

• -4-oxoquinoline derivative, the aliphatic nucleophilic substitution reaction can be employed, in which the 4-oxoquinoline nucleus acts as an azanucleophile, reacting with different alkyl halides. This reaction leads to products with high yields, and no byproducts are isolated. In this paper we

• and Discussion Synthesis Intermediate 6 was synthesized through the Gould–Jacobs method [24][25][26] and was first subjected to the carbonyl nucleophilic substitution reaction with benzylamine, according to a procedure already described in the literature [15][16]. The isolated carboxamide 5 was then

• verification is, for example, justified by the analysis of the electronic effects, as shown in the Scheme 5. Precisely because it is more unstable, the carboxamide conjugate base is a more reactive nucleophile and, therefore, associated with a lower energy barrier for the nucleophilic substitution reaction

Metal-free C–H mercaptalization of benzothiazoles and benzoxazoles using 1,3-propanedithiol as thiol source

• Yan Xiao,
• Bing Jing,
• Xiaoxia Liu,
• Hongyu Xue and
• Yajun Liu

Beilstein J. Org. Chem. 2019, 15, 279–284, doi:10.3762/bjoc.15.24

• activity against Candida albicans and Candida tropicalis [8] and 2-mercapto-1,3-benzothiol and its derivatives exhibit inhibitory effects against thyroid peroxidase [9]. (Hetero)aryl thiols are often prepared from the corresponding halides through direct nucleophilic substitution [10][11][12] or metal

• three-component reaction of o-iodoanilines and K2S in DMSO [20]. Another way to prepare 2-mercaptobenzothiazoles and 2-mercaptobenzoxazoles is the nucleophilic substitution of 2-halo-substituted benzothiazoles and benzoxazoles with sulfur-containing reagents including sodium thiosulfate [21], thiourea

• coupling product 6 [40]. As our previous work shows [23], (hetero)arylthioalkylthiols are easily converted to the corresponding (hetero)arylthiols in the presence of KOH and DMSO through an intramolecular nucleophilic substitution. Conclusion In this work, we developed a facile protocol for the direct

Silanediol versus chlorosilanol: hydrolyses and hydrogen-bonding catalyses with fenchole-based silanes

• Falco Fox,
• Jörg M. Neudörfl and
• Bernd Goldfuss

Beilstein J. Org. Chem. 2019, 15, 167–186, doi:10.3762/bjoc.15.17

• Nucleophilic substitution at silicon is already discussed with SN2 mechanism, following a backside attack opposite of the leaving group, as well as a front side attack near the leaving group [62][63][64][65][66][67][68]. A backside attack at the silicon in dichlorosilane 7 and monochlorosilanol 8 is blocked by

• . TIPS: triisopropylsilane. TBDMS: tert-butyldimethylsilane). Hydrogen-bond-catalyzed nucleophilic substitution of 18 with BIFOXSi(OH)2 (9) and nucleophile silyl ketene acetals 11. 18 and 9 form an activated electrophile ion pair complex which yields C–C coupling product 19 (Table 10). Nucleophilic

• substitution of 20 with BIFOXSi(OH)2 (9) and nucleophile silyl ketene acetals 11, 20 and 9 form an activated electrophile ion pair complex which yields C–C coupling product 22 (Table 11). Hydrolysis of BIFOXSiCl2 (7) to BIFOXSi(OH)2 (9) (Scheme 3) in different solvent mixtures, with or without KOH at different

Synthesis of mono-functionalized S-diazocines via intramolecular Baeyer–Mills reactions

• Miriam Schehr,
• Daniel Hugenbusch,
• Tobias Moje,
• Christian Näther and
• Rainer Herges

Beilstein J. Org. Chem. 2018, 14, 2799–2804, doi:10.3762/bjoc.14.257

• precursors for the incorporation in photopharmacophores using cross-coupling, peptide coupling or further functionalization methods such as nucleophilic substitution reaction of the benzyl alcohol 5. The yield determining steps prior to the Baeyer–Mills reaction are the formation of the hydroxylamine with

Transition metal-free oxidative and deoxygenative C–H/C–Li cross-couplings of 2H-imidazole 1-oxides with carboranyl lithium as an efficient synthetic approach to azaheterocyclic carboranes

• Lidia A. Smyshliaeva,
• Mikhail V. Varaksin,
• Pavel A. Slepukhin,
• Oleg N. Chupakhin and
• Valery N. Charushin

Beilstein J. Org. Chem. 2018, 14, 2618–2626, doi:10.3762/bjoc.14.240

• 10.3762/bjoc.14.240 Abstract The direct C–H functionalization methodology has first been applied to perform transition metal-free C–H/C–Li cross-couplings of 2H-imidazole 1-oxides with carboranyllithium. This atom- and step-economical approach, based on one-pot reactions of nucleophilic substitution of

• 1-oxide; nucleophilic substitution of hydrogen (SNH); Introduction Dicarbadodecaboranes (carboranes) are known to be 3D polyhedral clusters with a special type of structural organization, relative thermal and chemical stabilities, as well as unique physicochemical properties [1][2][3]. The

• substrates [39][40][41][42], which can be carried out by using SNH reactions (nucleophilic substitution of hydrogen) [43][44][45][46][47][48]. The SNH methodology corresponds to the basic principles of green chemistry [49][50][51][52][53], and it is now considered to be one of the most valuable approaches to

Synthesis of a water-soluble 2,2′-biphen[4]arene and its efficient complexation and sensitive fluorescence enhancement towards palmatine and berberine

• Xiayang Huang,
• Xinghua Zhang,
• Tianxin Qian,
• Junwei Ma,
• Lei Cui and
• Chunju Li

Beilstein J. Org. Chem. 2018, 14, 2236–2241, doi:10.3762/bjoc.14.198

• reaction sites was quantitatively prepared by the deprotection of 2,2’-OEtBP4 using excess BBr3. The nucleophilic substitution reaction of 2,2’-OHBP4 and ethyl bromoacetate, K2CO3 as the base, afforded 2,2’-COOEtBP4 in 88% yield. The hydrolysis of 2,2’-COOEtBP4 in NaOH solution and then acidification with

Synthesis and post-functionalization of alternate-linked-meta-para-[2ⁿ.1ⁿ]thiacyclophanes

• Wout De Leger,
• Koen Adriaensen,
• Koen Robeyns,
• Luc Van Meervelt,
• Joice Thomas,
• Björn Meijers,
• Mario Smet and
• Wim Dehaen

Beilstein J. Org. Chem. 2018, 14, 2190–2197, doi:10.3762/bjoc.14.192

• ][6][7][8][9]. Our group has experience in the synthesis of homothiacalix[n]arenes, a subclass of the thiacalix[n]arenes that has so far received little attention compared to other homoheteracalix[n]arenes [10][11]. Homothiacalix[4]arenes were successfully synthesized via nucleophilic substitution and

Hypervalent iodine compounds for anti-Markovnikov-type iodo-oxyimidation of vinylarenes

• Igor B. Krylov,
• Stanislav A. Paveliev,
• Mikhail A. Syroeshkin,
• Alexander A. Korlyukov,
• Pavel V. Dorovatovskii,
• Yan V. Zubavichus,
• Gennady I. Nikishin and
• Alexander O. Terent’ev

Beilstein J. Org. Chem. 2018, 14, 2146–2155, doi:10.3762/bjoc.14.188

• benzenesulfinate results in the nucleophilic substitution of both the iodine atom and the oxyphthalimide moiety to form a vicinal disulfone 4b. Conclusion Iodo-oxyimidation of vinylarenes using N-hydroxyphthalimide and N-hydroxysuccinimide was developed. PhI(OAc)2 was the best oxidant for the synthesis of the

Synthesis of new p-tert-butylcalix[4]arene-based polyammonium triazolyl amphiphiles and their binding with nucleoside phosphates

• Vladimir A. Burilov,
• Guzaliya A. Fatikhova,
• Mariya N. Dokuchaeva,
• Ramil I. Nugmanov,
• Diana A. Mironova,
• Pavel V. Dorovatovskii,
• Victor N. Khrustalev,
• Svetlana E. Solovieva and
• Igor S. Antipin

Beilstein J. Org. Chem. 2018, 14, 1980–1993, doi:10.3762/bjoc.14.173

• highly explosive [29]. Usually azide groups are installed in the upper rim of the macrocycle by a chloromethylation reaction and subsequent nucleophilic substitution by azide anions [30][31] forming rather flexible azidomethyl fragments. In this investigation more rigid arylazide calixarene derivatives

Assessing the possibilities of designing a unified multistep continuous flow synthesis platform

• Mrityunjay K. Sharma,
• Roopashri B. Acharya,
• Chinmay A. Shukla and
• Amol A. Kulkarni

Beilstein J. Org. Chem. 2018, 14, 1917–1936, doi:10.3762/bjoc.14.166

• ) condensation b) aromatic nucleophilic substitution reaction, c) deprotection and d) formation of lactate salt. Details of the same are given below: Condensation: Condensation takes place in a first reactor TR1 between the nitrile and hydrazine at high temperature and under pressure. Here, the nitrile was

• using pump P13. Aromatic nucleophilic substitution: The nucleophilic substitution reaction takes place between the pyrazole and N-ethylmorpholine. Pyrazole of step 1 in the extractor was pumped through P13 and N-ethylmorpholine through P3 into the reactor TR2 to form the arylated product of the pyrazole

Recent advances in hypervalent iodine(III)-catalyzed functionalization of alkenes

• Xiang Li,
• Pinhong Chen and
• Guosheng Liu

Beilstein J. Org. Chem. 2018, 14, 1813–1825, doi:10.3762/bjoc.14.154

• . Compared to the diverse reactivity profiles of transition metal-catalyzed functionalization of alkenes, hypervalent iodine (III)-mediated reactions are limited to nucleophilic substitution processes. Recently, Liu and co-workers reported a novel cooperative strategy by combining palladium catalysis and

Synthesis and photophysical studies of a multivalent photoreactive Ru^II-calix[4]arene complex bearing RGD-containing cyclopentapeptides

• Sofia Kajouj,
• Lionel Marcelis,
• Alice Mattiuzzi,
• Adrien Grassin,
• Damien Dufour,
• Pierre Van Antwerpen,
• Didier Boturyn,
• Eric Defrancq,
• Mathieu Surin,
• Julien De Winter,
• Pascal Gerbaux,
• Ivan Jabin and
• Cécile Moucheron

Beilstein J. Org. Chem. 2018, 14, 1758–1768, doi:10.3762/bjoc.14.150

• % yield. Diazotation followed by nucleophilic substitution with sodium azide gave the desired tetra-azido compound 4 in 56% overall yield from 3. It is noteworthy that the introduction of the azido groups on the calix[4]arene scaffold was clearly confirmed by the presence of an intense band at 2108 cm−1

An amine protecting group deprotectable under nearly neutral oxidative conditions

• Shahien Shahsavari,
• Chase McNamara,
• Mark Sylvester,
• Emily Bromley,
• Savannah Joslin,
• Bao-Yuan Lu and
• Shiyue Fang

Beilstein J. Org. Chem. 2018, 14, 1750–1757, doi:10.3762/bjoc.14.149

• , the dM-Dmoc group is expected to be more stable under nucleophilic conditions, which will allow many transformations including base hydrolysis of esters and amides, hydride reduction of carbonyl compounds, and a wide range of nucleophilic substitution reactions to be carried out without losing the