Unprecedented visible light-initiated topochemical [2 + 2] cycloaddition in a functionalized bimane dye

• Metodej Dvoracek,
• Brendan Twamley,
• Mathias O. Senge and
• Mikhail A. Filatov

Beilstein J. Org. Chem. 2025, 21, 500–509, doi:10.3762/bjoc.21.37

• crystallography, was irradiated, resulting in Cl2B (C), which showed approximately 18% dimer formation, while no dimerization was observed in the Me2B and Me4B (C) samples (see experimental section for details). The initial presence of the [2 + 2] dimer in the Cl2B (A) sample can be attributed to improper

• shielding from light, and unavoidable light exposure during crystal selection, and the X-ray measurement itself. As an additional test, the compounds were prepared as NMR samples in DMSO-d6 and irradiated with 405 nm LED. Irradiation in the solution phase did not result in any dimerization; the respective

Photomechanochemistry: harnessing mechanical forces to enhance photochemical reactions

• Francesco Mele,
• Ana M. Constantin,
• Andrea Porcheddu,
• Raimondo Maggi,
• Giovanni Maestri,
• Nicola Della Ca’ and
• Luca Capaldo

Beilstein J. Org. Chem. 2025, 21, 458–472, doi:10.3762/bjoc.21.33

• adhesion on the vial walls. Thus, the reactor was operated at 17.7 Hz for 20 h and the dimerization to 9.2 occurred in 96% 1H NMR yield with a 6:94 anti/syn selectivity. A different selectivity was observed when crystals were first ground, and then irradiated under argon without applying forces (65% yield

• ://creativecommons.org/licenses/by/4.0). Photomechanochemical control over stereoselectivity in the [2 + 2] dimerization of acenaphthylene. The photo in Scheme 9 was republished with permission of The Royal Society of Chemistry, from [75] (“Photomechanochemical control over stereoselectivity in the [2 + 2

Identification and removal of a cryptic impurity in pomalidomide-PEG based PROTAC

• Bingnan Wang,
• Yong Lu and
• Chuo Chen

Beilstein J. Org. Chem. 2025, 21, 407–411, doi:10.3762/bjoc.21.28

• Bingnan Wang Yong Lu Chuo Chen Department of Biochemistry, UT Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9038, USA 10.3762/bjoc.21.28 Abstract Chemically induced dimerization is a powerful tool for studying protein function, wherein the IMiD (the “immunomodulatory

• contamination. Keywords: glutarimide; IMiD; impurity; nucleophilic acyl substitution; PROTAC; Introduction Targeted protein degradation capitalizing on the concept of chemically induced dimerization has emerged as a new therapeutic approach recently [1]. In particular, the modularity of proteolysis targeting

Molecular diversity of the reactions of MBH carbonates of isatins and various nucleophiles

• Zi-Ying Xiao,
• Jing Sun and
• Chao-Guo Yan

Beilstein J. Org. Chem. 2025, 21, 286–295, doi:10.3762/bjoc.21.21

• . Diverse functionalized 3-substituted oxindole derivatives were successfully prepared in satisfactory yields and with high diastereoselectivity. In addition, the base-promoted dimerization of MBH carbonates of isatin afforded the ethylene-bridged bis(3-methylene)oxindole derivatives with nearly 4:1

• diastereomeric ratios. The relative configurations of the various polycyclic compounds were clearly elucidated by determination of several single crystal structures. Keywords: allylic SN2 reaction; dimerization; isatin; MBH carbonate; 3-methyleneoxindole; Introduction Isatins (indoline-2,3-diones) possessing

• have been obtained by DABCO-catalyzed dimerization of MBH carbonates of isatin in ODCB at high temperature (150 °C), which could be converted to bisspirooxindole derivatives via the isomerization of the double bond and a sequential thermal 6π-electrocyclic ring-closure process [30]. Here, the novel

Oxidation of [3]naphthylenes to cations and dications converts local paratropicity into global diatropicity

• Abel Cárdenas,
• Zexin Jin,
• Yong Ni,
• Jishan Wu,
• Yan Xia,
• Francisco Javier Ramírez and
• Juan Casado

Beilstein J. Org. Chem. 2025, 21, 277–285, doi:10.3762/bjoc.21.20

• pentacenes, are relatively stable molecules under ambient conditions, longer acenes undergo spontaneous dimerization and react with oxygen [5][6], owing to the rising diradical character. This behavior was also observed in the oxidized species of shorter acenes [7]. Surprisingly, Bettinger and Einholz [5

• ] reported a stable heptacene dication in concentrated sulfuric acid, a stability attributed to the intermolecular Coulomb repulsion between the charged molecules, which prevents the dimerization of the acene. This exciting finding suggests possible modes of kinetic stabilization of oxidized species of π

Synthesis of disulfides and 3-sulfenylchromones from sodium sulfinates catalyzed by TBAI

• Zhenlei Zhang,
• Ying Wang,
• Xingxing Pan,
• Manqi Zhang,
• Wei Zhao,
• Meng Li and
• Hao Zhang

Beilstein J. Org. Chem. 2025, 21, 253–261, doi:10.3762/bjoc.21.17

• not give the product, suggesting that conversion of sodium 4-methylbenzenesulfinate to 4-methylbenzenesulfinic acid was required. Several solvents were tested and found to produce the disulfide in low yield (Table 1, entries 6–11), except for dimethylacetamide (DMA). Given the dimerization nature of

Hydrogen-bonded macrocycle-mediated dimerization for orthogonal supramolecular polymerization

• Wentao Yu,
• Zhiyao Yang,
• Chengkan Yu,
• Xiaowei Li and
• Lihua Yuan

Beilstein J. Org. Chem. 2025, 21, 179–188, doi:10.3762/bjoc.21.10

• covalently linked polymers. So far, the design of such monomers has relied heavily on three-dimensional macrocycles, and the use of two-dimensional shape-persistent macrocycles for this purpose remains rather rare. Here, we demonstrate a dimerization motif based on a hydrogen-bonded macrocycle that can be

• polymerization concentration of 17 μM. These polymers were highly concentration-dependent. Establishing this new dimerization motif with shape-persistent H-bonded macrocycles widens the scope of noncovalent building blocks for supramolecular polymers and augurs well for the future development of functional

• capable of dimerization by binding to a macrocycle in a 2:2 stoichiometry [22][23]. Such binding motifs are intriguing for macrocycle-mediated supramolecular dimerization since they may enable multiple modes of noncovalent connectivity through combination with other noninterfering interactions (e.g

Recent advances in electrochemical copper catalysis for modern organic synthesis

• Yemin Kim and
• Won Jun Jang

Beilstein J. Org. Chem. 2025, 21, 155–178, doi:10.3762/bjoc.21.9

• reactions, particularly in controlling the high reactivity and selectivity of radical intermediates [13][14]. Early studies on copper-mediated radical reactions, such as Julia’s work on radical cyclization reaction [15], along with advancements in dimerization [16][17], oxidative cleavage [18][19], and

Emerging trends in the optimization of organic synthesis through high-throughput tools and machine learning

• Pablo Quijano Velasco,
• Kedar Hippalgaonkar and
• Balamurugan Ramalingam

Beilstein J. Org. Chem. 2025, 21, 10–38, doi:10.3762/bjoc.21.3

• four-step process involves allylation, Claisen rearrangement, isomerization, and oxidative dimerization. Each reaction step was optimized independently by using either online HPLC or in-line benchtop NMR spectroscopy to afford an overall yield of 67% in 66 iterative experiments over four linear

• convenient methodology for global optimization, eliminating the necessity of a theoretical model. A reconfigurable automated flow platform integrating online HPLC monitoring was used for the cobalt-catalyzed aerobic oxidative dimerization of desmethoxycarpacine (6) to carpanone (7) in the presence of oxygen

Controlled oligomerization of [1.1.1]propellane through radical polarity matching: selective synthesis of SF₅- and CF₃SF₄-containing [2]staffanes

• Jón Atiba Buldt,
• Wang-Yeuk Kong,
• Yannick Kraemer,
• Masiel M. Belsuzarri,
• Ansh Hiten Patel,
• James C. Fettinger,
• Dean J. Tantillo and
• Cody Ross Pitts

Beilstein J. Org. Chem. 2024, 20, 3134–3143, doi:10.3762/bjoc.20.259

• in the medicinal chemistry arena, in stark contrast to single BCP units over the past 12 years [20][21][22][23][24]. One plausible explanation for the paucity of applications of [n]staffanes in materials or biological settings is a synthetic accessibility issue. For instance, dimerization of

Advances in radical peroxidation with hydroperoxides

• Oleg V. Bityukov,
• Pavel Yu. Serdyuchenko,
• Andrey S. Kirillov,
• Gennady I. Nikishin,
• Vera A. Vil’ and
• Alexander O. Terent’ev

Beilstein J. Org. Chem. 2024, 20, 2959–3006, doi:10.3762/bjoc.20.249

• final peroxide 157: recombination of radical C with tert-butylperoxy radical D or oxidation of radical C to carbocation E, which is nucleophilically attacked by TBHP. β-Peroxy ketones 159 were synthesized via oxidative dimerization of styrenes 158 using the Cu(I)/TBHP system (Scheme 50) [42]. The

N-Glycosides of indigo, indirubin, and isoindigo: blue, red, and yellow sugars and their cancerostatic activity

• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 2840–2869, doi:10.3762/bjoc.20.240

• material in Europe (Scheme 1). It is obtained by extraction and isolation of the colorless indole-O-glycoside indicane which is then hydrolyzed to give indoxyl. The latter undergoes oxidative dimerization to provide indigo. In the 19th century, syntheses of indigo were developed which made the pigment

• precursors. The base-mediated reaction of 5-chloroanthranilic acid (8a) with chloroacetic acid afforded 8b (Scheme 5) [20]. Acetylation and base-mediated cyclization gave indoxyl 9a which was transformed to indigo 1c by oxidative dimerization. Benzylation finally afforded 1d. 4,6-Benzylidenation of ᴅ

• ‘-diglycosides In our group, the synthesis of N,N’-diglycosylated isoindigos was studied. In contrast to isatin-N-glycosides, oxindole-N-glycosides are not readily available. Therefore, reductive dimerization of isatin-N-glycosides was considered as a strategy for the synthesis of the target compounds. Isatin-N

Mechanochemical difluoromethylations of ketones

• Jinbo Ke,
• Pit van Bonn and
• Carsten Bolm

Beilstein J. Org. Chem. 2024, 20, 2799–2805, doi:10.3762/bjoc.20.235

• difluorocarbene typically requires harsh conditions and involves toxic precursors, alongside with the risk of dimerization to tetrafluoroethylene [31]. Although this dimerization can be mitigated by controlling the concentration and reaction environment, as longer half-lives are observed for difluorocarbenes in

The scent gland composition of the Mangshan pit viper, Protobothrops mangshanensis

• Jonas Holste,
• Paul Weldon,
• Donald Boyer and
• Stefan Schulz

Beilstein J. Org. Chem. 2024, 20, 2644–2654, doi:10.3762/bjoc.20.222

• -diastereomers [34]. Unfortunately, the absolute configuration of these compounds could not be determined due to the small amounts available. Diketopiperazines can be formed either enzymatically or non-enzymatically, e.g., by heat dimerization of amino acids [35]. Both antibacterial and antifungal activities

Synthesis and reactivity of the di(9-anthryl)methyl radical

• Tomohiko Nishiuchi,
• Kazuma Takahashi,
• Yuta Makihara and
• Takashi Kubo

Beilstein J. Org. Chem. 2024, 20, 2254–2260, doi:10.3762/bjoc.20.193

• dimerization in solution, the radical still remains even at 190 K due to the bulky nature of the two anthryl groups. Interestingly, upon exposure to air, the purple color of the radical solution quickly fades to orange, resulting in decomposition to give 9-anthryl aldehyde and anthroxyl radical derivatives

• . Keywords: anthracene; cation; dimerization; radical; reactivity; Introduction Organic radicals have garnered significant attention in various research fields, including catalysis [1][2][3][4], chromophores [5][6][7][8], and as agents in dynamic nuclear polarization [9][10][11][12]. Recently, highly stable

• site, head-to-head σ-dimerization of the DAntM radical could yield 1,1,2,2-tetra(9-anthryl)ethane, which is a new anthracene embedded ethane [30] and would be a good candidate for the synthesis of overcrowded ethylene [31][32][33][34][35][36]. Herein, we report the synthesis and properties of the DAntM

Metal-free double azide addition to strained alkynes of an octadehydrodibenzo[12]annulene derivative with electron-withdrawing substituents

• Naoki Takeda,
• Shuichi Akasaka,
• Susumu Kawauchi and
• Tsuyoshi Michinobu

Beilstein J. Org. Chem. 2024, 20, 2234–2241, doi:10.3762/bjoc.20.191

• %. Silyl deprotection with (n-C4H9)4NF in THF followed by acetylenic oxidative dimerization under Hay conditions produced the desired DBA 5 in 12.7% yield. It should be noted that a thermodynamically more stable trimeric macrocycle was also formed in 17.7%, but it was not isolated and purified because it

Efficacy of radical reactions of isocyanides with heteroatom radicals in organic synthesis

• Akiya Ogawa and
• Yuki Yamamoto

Beilstein J. Org. Chem. 2024, 20, 2114–2128, doi:10.3762/bjoc.20.182

• can add to isocyanides to form the imidoyl radicals. In this reaction, telluro radicals (ArTe•) also forms in situ, but the relative reactivity of them toward isocyanides might be very low. In addition, dimerization of ArTe• to (ArTe)2 is very fast, and therefore, the ArTe-substituted imidoyl radical

• groups on boron are 1,2-shifted to the isocyanide carbon, yielding the compounds (H2B-C(=NR)-H or R'2B-C(=NR)-R') with the isocyanide inserted between the B–H or B–alkyl bond [45][46]. The insertion products easily underwent dimerization to afford 2,5-diboradihydropyrazine derivatives 16 (Scheme 10a

Chemo-enzymatic total synthesis: current approaches toward the integration of chemical and enzymatic transformations

• Ryo Tanifuji and
• Hiroki Oguri

Beilstein J. Org. Chem. 2024, 20, 1693–1712, doi:10.3762/bjoc.20.151

• pathway of these natural products involves late-stage skeletal diversification triggered by enzymatic oxidative dearomatization (Scheme 4A). Specifically, FAD-dependent monooxygenase catalyzes the oxidative dearomatization of the aromatic intermediate, leading to subsequent homo- and hetero-dimerization

• synthesized 33 generated the highly reactive intermediate 34 in aqueous solvents under mild conditions [37][42]. In this process, the co-solvent (cs) allowed control of the dimerization modes via either Michael addition or Diels–Alder reactions, facilitating the systematic total synthesis of the

• recombinant SorbC enantioselectively introduced a hydroxy group to generate the reactive intermediate (S)-34 [34]. Cyclohexadienone (S)-34 was relatively stable in aqueous reaction solvents, however, quenching the enzymatic reaction by the addition of organic solvents led to homo-dimerization. Based on these

Phenotellurazine redox catalysts: elements of design for radical cross-dehydrogenative coupling reactions

• Alina Paffen,
• Christopher Cremer and
• Frederic W. Patureau

Beilstein J. Org. Chem. 2024, 20, 1292–1297, doi:10.3762/bjoc.20.112

• simple oxygen atmosphere (Scheme 1a) [30][31][32]. Most recently, we also showed that phenotellurazines could catalyze the oxidative dimerization of indoles, likewise under a simple oxygen atmosphere. 2-Methoxyphenotellurazine PTeZ2 proved to be the optimal catalyst in the latter case (Scheme 1b) [33

• -substrate interaction. Phenotellurazine-catalyzed cross-dehydrogenative couplings. Screening of new Te(II)-catalyst candidates. ODCB: ortho-dichlorobenzene. Phenotellurazine-catalyzed cross-dehydrogenative indole dimerization. Supporting Information Supporting Information File 84: Experimental section and

Chemoenzymatic synthesis of macrocyclic peptides and polyketides via thioesterase-catalyzed macrocyclization

• Senze Qiao,
• Zhongyu Cheng and
• Fuzhuo Li

Beilstein J. Org. Chem. 2024, 20, 721–733, doi:10.3762/bjoc.20.66

• gramicidin S synthetase GrsB [44]. Combined with the peptidyl carrier protein, GrsB PCP-TE was tested by using corresponding pentapeptides NAC thioester and thiophenol thioester, which led to the formation of the desired cyclic decapeptide lactam gramicidin S (9) through a sequential dimerization and

Switchable molecular tweezers: design and applications

• Pablo Msellem,
• Maksym Dekthiarenko,
• Nihal Hadj Seyd and
• Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

Mechanisms for radical reactions initiating from N-hydroxyphthalimide esters

• Carlos R. Azpilcueta-Nicolas and
• Jean-Philip Lumb

Beilstein J. Org. Chem. 2024, 20, 346–378, doi:10.3762/bjoc.20.35

• dimerization of radical 76. Reaction between radical 9 and species 78 affords boronic ester 79 while returning boryl radical 76. Finally, chain propagation takes place via reaction of 76 with another equivalent of the NHPI ester 3. The Baran lab has recently published a complementary electrochemical method

Synthesis of π-conjugated polycyclic compounds by late-stage extrusion of chalcogen fragments

• Aissam Okba,
• Pablo Simón Marqués,
• Kyohei Matsuo,
• Naoki Aratani,
• Hiroko Yamada,
• Gwénaël Rapenne and
• Claire Kammerer

Beilstein J. Org. Chem. 2024, 20, 287–305, doi:10.3762/bjoc.20.30

• this situation. Acenes are a class of aromatic compounds composed of linearly fused benzene rings, which can be regarded as the narrowest graphene nanoribbons. They are highly promising p-type organic semiconductors, but suffer from insolubility and instability leading to dimerization and/or

Electron-beam-promoted fullerene dimerization in nanotubes: insights from DFT computations

• Laura Abella,
• Gerard Novell-Leruth,
• Josep M. Ricart,
• Josep M. Poblet and
• Antonio Rodríguez-Fortea

Beilstein J. Org. Chem. 2024, 20, 92–100, doi:10.3762/bjoc.20.10

• (CIIAE), FUNDECYT-PCTEx, Polytechnic School of Caceres Building, Office CIIAE-C7, Av. Universidad s/n, 10003 Cáceres, Spain 10.3762/bjoc.20.10 Abstract Fullerene dimerization inside a peapod is analyzed at DFT level by characterizing the stationary points and deriving the energy profile of the initial

• metadynamics simulations provide hints on structures for the initial steps of the irreversible phase 2 where bond formation and breaking lead to important structural reorganizations within the coalescence process. Keywords: DFT; dimerization; fullerene; molecular dynamics; peapods; Introduction Transmission

• have been published that record the dynamic behavior of a wide range of molecules and chemical reactions. One such process was the dimerization of C60 fullerene in a carbon nanotube peapod, i.e., hybrid structures consisting of fullerene molecules encapsulated in single-walled carbon nanotubes (SWCNT

Multi-redox indenofluorene chromophores incorporating dithiafulvene donor and ene/enediyne acceptor units

• Christina Schøttler,
• Kasper Lund-Rasmussen,
• Line Broløs,
• Philip Vinterberg,
• Ema Bazikova,
• Viktor B. R. Pedersen and
• Mogens Brøndsted Nielsen

Beilstein J. Org. Chem. 2024, 20, 59–73, doi:10.3762/bjoc.20.8

• pyrrole unit to one of the dithiole rings of an IF-TTF, allowing for dimerization of extended TTFs via the nitrogen atom by different linkers [14]. Donor–acceptor chromophores can be obtained by replacing one of the dithiafulvene (DTF) rings of the IF-TTF by an electron acceptor. Cyclic and acyclic