Selectfluor and alcohol-mediated synthesis of bicyclic oxyfluorination compounds by Wagner–Meerwein rearrangement

• Ziya Dağalan,
• Muhammed Hanifi Çelikoğlu,
• Saffet Çelik,
• Ramazan Koçak and
• Bilal Nişancı

Beilstein J. Org. Chem. 2024, 20, 1462–1467, doi:10.3762/bjoc.20.129

• rearrangement using benzonorbornadiene and the chiral natural compound (+)-camphene as bicyclic alkenes, selectfluor as an electrophilic fluorine source, and water and various alcohols as nucleophile sources. The structure of bicyclic oxy- and alkoxyfluorine compounds was determined by NMR and QTOF-MS analyses

• . Keywords: alkoxyfluorine compounds; bicyclic alkene; oxyfluorination; selectfluor; Wagner–Meerwein rearrangement; Introduction Organofluorines are of great importance in the pharmaceutical and agrochemical industries, as the presence of fluorine has a serious effect on the biological activities of organic

• compounds by changing their metabolic stability, hydrogen bonding ability, lipophilicity, solubility, bioavailability, conformation and general structure [1][2][3][4]. About 20% of commercially available drugs contain fluorine, and this ratio is estimated to increase further [5][6]. Among organofluorines

Predicting bond dissociation energies of cyclic hypervalent halogen reagents using DFT calculations and graph attention network model

• Yingbo Shao,
• Zhiyuan Ren,
• Zhihui Han,
• Li Chen,
• Yao Li and
• Xiao-Song Xue

Beilstein J. Org. Chem. 2024, 20, 1444–1452, doi:10.3762/bjoc.20.127

• Yingbo Shao Zhiyuan Ren Zhihui Han Li Chen Yao Li Xiao-Song Xue State Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Nankai University, Tianjin 300071, P. R. China Key Laboratory of Fluorine and Nitrogen Chemistry and Advanced Materials, Shanghai Institute of Organic Chemistry

Synthesis and physical properties of tunable aryl alkyl ionic liquids based on 1-aryl-4,5-dimethylimidazolium cations

• Stefan Fritsch and
• Thomas Strassner

Beilstein J. Org. Chem. 2024, 20, 1278–1285, doi:10.3762/bjoc.20.110

• unsubstituted aryl moiety. The viscosities of the 4-CF3 and 2,4-F2 TAAILs with butyl chains are very similar, since the viscosity is influenced by π–π and dispersion effects facilitated by the electron-withdrawing effect of the fluorine atoms [46][47]. The 4-OCF3 substituted TAAIL with a butyl chain, however

• shows the influence of the electronegative fluorine atoms on the electrostatic potential of the cation. Conclusion Based on the synthesis of nine different 1-aryl-4,5-dimethyl substituted imidazoles we report a new class of ionic liquids with electron-donating and -withdrawing substituents, three

Domino reactions of chromones with activated carbonyl compounds

• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 1256–1269, doi:10.3762/bjoc.20.108

• steric influence of the fluorine atom and of the substituent R1 might have an influence on the conformation which facilitates the intramolecular aldol reaction at the expense of the nitrile addition. In the case of formation of biphenyls 44, these products were generally obtained in good yields (63–79

Synthesis and optical properties of bis- and tris-alkynyl-2-trifluoromethylquinolines

• Stefan Jopp,
• Franziska Spruner von Mertz,
• Peter Ehlers,
• Alexander Villinger and
• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 1246–1255, doi:10.3762/bjoc.20.107

• ). Fluorine-containing quinolines and quinolinones are of particular interest, since fluorine atoms are known to enhance the pharmacological properties of organic molecules [7][8][9][10][11][12][13][14][15]. Fluorine atoms act as bioisosteres of hydrogen atoms, while CF3 groups are bioisosteres of hydroxy and

• methyl groups and are known to protect from metabolic oxidation [16]. Fluorine-containing arenes are metabolically more stable as compared to non-fluorinated arenes and they show a higher lipophilicity. Known synthetic approaches towards 2-trifluoromethylquinolines include the cyclisation of anilines

Synthesis of 1,4-azaphosphinine nucleosides and evaluation as inhibitors of human cytidine deaminase and APOBEC3A

• Maksim V. Kvach,
• Stefan Harjes,
• Harikrishnan M. Kurup,
• Geoffrey B. Jameson,
• Elena Harjes and
• Vyacheslav V. Filichev

Beilstein J. Org. Chem. 2024, 20, 1088–1098, doi:10.3762/bjoc.20.96

• ) quickly converts into the inactive β-ribopyranosyl form in solution, but substituting hydrogen atoms with fluorine atoms in the 2'-position leads to cedazuridine (Ib), which is stable [53] and now used in clinics as a CDA inhibitor in the liver, extending the lifetime of coadministered decitabine [8]. We

Direct synthesis of acyl fluorides from carboxylic acids using benzothiazolium reagents

• Lilian M. Maas,
• Alex Haswell,
• Rory Hughes and
• Matthew N. Hopkinson

Beilstein J. Org. Chem. 2024, 20, 921–930, doi:10.3762/bjoc.20.82

• to acyl fluorides are inspiring greater interest in these compounds. Various synthetic approaches have been investigated with two main strategies being pursued: fluorine-transfer to acyl radicals and nucleophilic fluorination of acyl electrophiles [15]. The latter approach is the most intensively

(Bio)isosteres of ortho- and meta-substituted benzenes

• H. Erik Diepers and
• Johannes C. L. Walker

Beilstein J. Org. Chem. 2024, 20, 859–890, doi:10.3762/bjoc.20.78

• activity, if not an improvement [1]. Often-used bioisosteres include the tetrazole group for a carboxylic acid [2][3][4][5] and fluorine atoms in place of hydrogens [6][7]. The inclusion of fluorine can alter the polarity of a molecule and can also be used to prevent epimerisation, as seen in

• 109 (Scheme 12A) [58]. The formed products all contained a pendant primary iodide group and the synthesis was additionally shown to be tolerant of functional groups including protected amines (in 110c), protected alcohols (in 110d) and nitriles (in 110e). Grygorenko and co-workers accessed fluorine

• -workers [83]. Fluorine-substituted trisubstitued BCHs were accessed by Mykhailiuk and co-workers by photocatalysed intramolecular crossed [2 + 2] cycloaddition [36]. Glorius and co-workers also investigated the synthesis of polysubstituted 2-oxa-BCHs. Trisubstituted 2-oxa-BCHs were shown to be accessible

Ortho-ester-substituted diaryliodonium salts enabled regioselective arylocyclization of naphthols toward 3,4-benzocoumarins

• Ke Jiang,
• Cheng Pan,
• Limin Wang,
• Hao-Yang Wang and
• Jianwei Han

Beilstein J. Org. Chem. 2024, 20, 841–851, doi:10.3762/bjoc.20.76

• explored the reactivity of ortho-functionalized diaryliodonium salts containing electron-withdrawing groups (EWGs) such as fluorine and nitro groups [29][30]. These ortho-substituted diaryliodonium salts undergo selective benzocyclizations and arylocyclizations with aromatic acids, leading to 3,4

Synthesis of new representatives of A₃B-type carboranylporphyrins based on meso-tetra(pentafluorophenyl)porphyrin transformations

• Victoria M. Alpatova,
• Evgeny G. Rys,
• Elena G. Kononova and
• Valentina A. Ol'shevskaya

Beilstein J. Org. Chem. 2024, 20, 767–776, doi:10.3762/bjoc.20.70

• single pentafluorophenyl ring was prepared through the regioselective nucleophilic aromatic substitution reaction of the p-fluorine atoms in 5,10,15,20-tetrakis(pentafluorophenyl)porphyrin with 9-mercapto-m-carborane. The reaction of this porphyrin with sodium azide led to the selective substitution of

• the p-fluorine atom in the pentafluorophenyl substituent with an azide functionality which upon reduction with SnCl2 resulted in the formation of the corresponding porphyrin with an amino group. Pentafluorophenyl-substituted A3B-porphyrins were studied and transformed to thiol and amino-substituted

• carborane A3B-porphyrin were also synthesized based on the amino-substituted A3B-porphyrin. The structures of the prepared carboranylporphyrins were determined by UV–vis, IR, 1H, 19F, 11B NMR spectroscopic data and MALDI mass spectrometry. Keywords: bioconjugation; carboranes; fluorine; porphyrin; SNAr

SOMOphilic alkyne vs radical-polar crossover approaches: The full story of the azido-alkynylation of alkenes

• Julien Borrel and
• Jerome Waser

Beilstein J. Org. Chem. 2024, 20, 701–713, doi:10.3762/bjoc.20.64

• , entries 1 and 2). Unfortunately, the yield did not increase and only a slightly worse mass balance was observed. Multiple reagents are known to abstract fluorine from trifluoroborate salts to form the corresponding difluoroborate species [57][58][59][60]. This approach has previously been successful to

Synthesis of 2,2-difluoro-1,3-diketone and 2,2-difluoro-1,3-ketoester derivatives using fluorine gas

• Alexander S. Hampton,
• David R. W. Hodgson,
• Graham McDougald,
• Linhua Wang and
• Graham Sandford

Beilstein J. Org. Chem. 2024, 20, 460–469, doi:10.3762/bjoc.20.41

• Swing Road, Greensboro, North Carolina, NC 27409, USA 10.3762/bjoc.20.41 Abstract Solutions of 1,3-diketones and 1,3-ketoester derivatives react with fluorine to give the corresponding 2,2-difluoro-1,3-dicarbonyl derivatives in the presence of quinuclidine. Quinuclidine reacts with fluorine in situ to

• generate a fluoride ion that facilitates limiting enolization processes, and an electrophilic N–F fluorinating agent that is reactive towards neutral enol species. Keywords: difluorination; difluoromethylene; direct fluorination; electrophilic fluorination; organofluorine; Introduction Fluorine is

• present in many agrochemical and pharmaceutical products owing to the beneficial properties imparted such as increased metabolic stability, lipophilicity and bioavailability of the bioactive entity [1][2][3]. In 2018, 30% of FDA approved drugs contained at least one fluorine atom, with an average of 2.7

(E,Z)-1,1,1,4,4,4-Hexafluorobut-2-enes: hydrofluoroolefins halogenation/dehydrohalogenation cascade to reach new fluorinated allene

• Nataliia V. Kirij,
• Andrey A. Filatov,
• Yurii L. Yagupolskii,
• Sheng Peng and
• Lee Sprague

Beilstein J. Org. Chem. 2024, 20, 452–459, doi:10.3762/bjoc.20.40

• compound, but led to the elimination of two fluorine atoms with the formation of 1,1,4,4-tetrafluorobuta-1,3-diene [9]. It was also shown that the reactions of the boron reagent (CAACMe)BH2Li(thf)3 with hydrofluoroolefins, including (Z)-1,1,1,4,4,4-hexafluorobut-2-ene, results in defluoroborylation to form

• defluorosilylation product was obtained [11]. In a related study of the hydrosilylation reaction of olefins 1a,b, it was shown that, depending on the catalyst used, platinum or rhodium compounds, along with the products of the addition of silane to the double bond, the elimination of the fluorine atom occurs with

• fluorine atoms of the CF2 group as doublets of multiplets at δ −66.7 and −70.3 ppm with a coupling constant of 2JFF = 15 Hz. In the 1H NMR spectrum, there was a signal attributed to CH proton at 4.9 ppm as a quartet of multiplets with a coupling constant of 3JHF = 6 Hz. Thus, during the study of reactions

Mono or double Pd-catalyzed C–H bond functionalization for the annulative π-extension of 1,8-dibromonaphthalene: a one pot access to fluoranthene derivatives

• Nahed Ketata,
• Linhao Liu,
• Ridha Ben Salem and
• Henri Doucet

Beilstein J. Org. Chem. 2024, 20, 427–435, doi:10.3762/bjoc.20.37

• by successive palladium-catalyzed intermolecular and intramolecular C–H arylations using arenes activated by fluorine or chlorine substituents, or by combining a palladium-catalyzed intermolecular Suzuki coupling followed by an intramolecular C–H bond arylation, ii) on functional group tolerance for

• cycle involves the oxidative addition of 1,8-dibromonaphthalene. Then, a concerted metalation–deprotonation of the arene, which usually occurs at the ortho-position of an activating group such as a fluorine or a chlorine atom, followed by reductive elimination, gives the corresponding intermediate 1

• -chloro-2-fluorobenzene is known to take place at the C–H bond ortho to the fluorine atom [31]. Consequently, from 1,8-dibromonaphthalene and 1-chloro-2-fluorobenzene, fluoranthene 7 bearing a fluorine substituent at position 7 and a chlorine at position 8 was obtained. 7-Fluorofluoranthene-8-carbonitrile

Copper-catalyzed multicomponent reaction of β-trifluoromethyl β-diazo esters enabling the synthesis of β-trifluoromethyl N,N-diacyl-β-amino esters

• Youlong Du,
• Haibo Mei,
• Ata Makarem,
• Ramin Javahershenas,
• Vadim A. Soloshonok and
• Jianlin Han

Beilstein J. Org. Chem. 2024, 20, 212–219, doi:10.3762/bjoc.20.21

• esters; Introduction The insertion of fluorine-containing components frequently confers desirable physical and biological properties to organic molecules, and the development of fluorine-containing drugs is an important field of research [1][2][3][4][5][6][7][8][9]. It is estimated that 30% of drugs and

• over 50% of agricultural chemicals contain at least one fluorine atom, among which architectural motifs containing fluorine and amino acid residues are a fast-growing segment of modern pharmaceuticals [10][11][12][13]. Fluoroalkyldiazo compounds belong to the most versatile and valuable reagents in

Chiral phosphoric acid-catalyzed transfer hydrogenation of 3,3-difluoro-3H-indoles

• Yumei Wang,
• Guangzhu Wang,
• Yanping Zhu and
• Kaiwu Dong

Beilstein J. Org. Chem. 2024, 20, 205–211, doi:10.3762/bjoc.20.20

• enantioselectivity of the reaction. The role of fluorine and alkyne in the reaction should be close to the gem-dimethyl moiety and the phenyl group in the previous research [32]. Conclusion In summary, we developed a convenient method for the synthesis of chiral difluoroindoline compounds for the first time. With a

Perspectives on push–pull chromophores derived from click-type [2 + 2] cycloaddition–retroelectrocyclization reactions of electron-rich alkynes and electron-deficient alkenes

• Michio Yamada

Beilstein J. Org. Chem. 2024, 20, 125–154, doi:10.3762/bjoc.20.13

• consisted of hydrogen (as in 59) or fluorine (as in 60) atoms [131]. For 59, the emergence of a metastable radical ion-pair state (H12SubPc•+–TCBD•−–aniline) was realized after the generation of the H12SubPc singlet excited state via 550 nm and 458 nm excitations, corresponding to the Q-band of H12SubPc and

Aromatic systems with two and three pyridine-2,6-dicarbazolyl-3,5-dicarbonitrile fragments as electron-transporting organic semiconductors exhibiting long-lived emissions

• Karolis Leitonas,
• Brigita Vigante,
• Dmytro Volyniuk,
• Audrius Bucinskas,
• Pavels Dimitrijevs,
• Sindija Lapcinska,
• Pavel Arsenyan and
• Juozas Vidas Grazulevicius

Beilstein J. Org. Chem. 2023, 19, 1867–1880, doi:10.3762/bjoc.19.139

• the energy required to remove an electron from a solid material. Thin film samples were precisely prepared through vacuum deposition onto cleaned fluorine-doped tin oxide (FTO)-coated glass substrates, maintained at a low pressure of 2 × 10−6 mbar to ensure sample integrity. During the IPPE experiment

Trifluoromethylated hydrazones and acylhydrazones as potent nitrogen-containing fluorinated building blocks

• Zhang Dongxu

Beilstein J. Org. Chem. 2023, 19, 1741–1754, doi:10.3762/bjoc.19.127

• . Keywords: acylhydrazones; difluoromethylation; dihydropyridazine; fluorinated building blocks; hydrazones; imidazolidines; pyrazoles; pyrazolidines; pyrazolines; trifluoromethylation; Introduction The introduction of fluorine into pharmaceuticals, agrochemicals, and materials can significantly enhance

• lipophilicity and metabolic stability compared to nonfluorinated compounds [1][2][3][4][5]. At present, about 300 drug molecules and over 400 pesticides on the market contain at least one fluorine atom [6][7]. Therefore, the development of novel and effective synthetic methodologies for the synthesis of

• building blocks offers another mainstream approach to introducing fluorine. Among these, di/trifluorodiazoethane [19][20][21][22], trifluoromethyl aldimines [23][24][25], trifluoroacetimidoyl halides [26], and fluoroalkyl N-sulfonyl hydrazones [27] have emerged as powerful nitrogen-containing fluorinated

Quinoxaline derivatives as attractive electron-transporting materials

• Zeeshan Abid,
• Liaqat Ali,
• Sughra Gulzar,
• Faiza Wahad,
• Raja Shahid Ashraf and
• Christian B. Nielsen

Beilstein J. Org. Chem. 2023, 19, 1694–1712, doi:10.3762/bjoc.19.124

• ability of NFAs. Huang et al. synthesized noncovalently fused-ring electron acceptors (NFREAs), Qx20 and Qx21, featuring 6,7-difluoro-2,3-diphenylquinoxaline core. The fluorine atoms of the core formed multiple noncovalent bonds (N···H and S···F) thus improving backbone coplanarity. This approach enhanced

• was used to prove that employing the same acceptor unit for both donor and acceptor is an effective approach. This strategy has been shown to be successful in achieving high Voc for benzotriazole materials, and now it has been extended to quinoxaline materials [38]. Ji et al. introduced fluorine atoms

• self-assembled monolayer in devices. The molecular dipole and work function of gold was adjusted by using fluorine and CN as well as dimethylamino substituents on the quinoxaline. Notably, the researchers tuned the work function of gold over a range of 1.0 eV [59]. The study by You et al. quoted in the

Morpholine-mediated defluorinative cycloaddition of gem-difluoroalkenes and organic azides

• Tzu-Yu Huang,
• Mario Djugovski,
• Sweta Adhikari,
• Destinee L. Manning and
• Sudeshna Roy

Beilstein J. Org. Chem. 2023, 19, 1545–1554, doi:10.3762/bjoc.19.111

• , organic azides, and morpholine. Terminal gem-difluoroalkenes exhibit unique reactivity toward nucleophiles. The two σ-withdrawing fluorine atoms at the α-position and the strong polar nature of the double bond make gem-difluoroalkenes susceptible to a nucleophilic attack that is followed by a β-fluoride

Synthesis and biological evaluation of Argemone mexicana-inspired antimicrobials

• Jessica Villegas,
• Bryce C. Ball,
• Katelyn M. Shouse,
• Caleb W. VanArragon,
• Ashley N. Wasserman,
• Hannah E. Bhakta,
• Allen G. Oliver,
• Danielle A. Orozco-Nunnelly and
• Jeffrey M. Pruet

Beilstein J. Org. Chem. 2023, 19, 1511–1524, doi:10.3762/bjoc.19.108

• , followed by cyclization with glyoxal in formic acid. We then wished to slightly perturb the electron density via introduction of fluorine (either at R1 or R3), but it was at this time that an unexpected result was observed. Following the same conditions which produced B1, NMR evaluation of our next product

Cyclization of 1-aryl-4,4,4-trichlorobut-2-en-1-ones into 3-trichloromethylindan-1-ones in triflic acid

• Vladislav A. Sokolov,
• Andrei A. Golushko,
• Irina A. Boyarskaya and
• Aleksander V. Vasilyev

Beilstein J. Org. Chem. 2023, 19, 1460–1470, doi:10.3762/bjoc.19.105

• -protonated forms B is substantially delocalized from the carbonyl group to vinyl carbon C3. For fluorophenyl-substituted compounds and cations 1d and Ad, 2d and Bd, also a large downfield shift of the corresponding fluorine signals is observed in the 19F NMR spectra (∆δ = 25.3–25.7 ppm), which shows a

Synthesis of ether lipids: natural compounds and analogues

• Marco Antônio G. B. Gomes,
• Alicia Bauduin,
• Chloé Le Roux,
• Romain Fouinneteau,
• Wilfried Berthe,
• Mathieu Berchel,
• Hélène Couthon and
• Paul-Alain Jaffrès

Beilstein J. Org. Chem. 2023, 19, 1299–1369, doi:10.3762/bjoc.19.96

Exploring the role of halogen bonding in iodonium ylides: insights into unexpected reactivity and reaction control

• Carlee A. Montgomery and
• Graham K. Murphy

Beilstein J. Org. Chem. 2023, 19, 1171–1190, doi:10.3762/bjoc.19.86

• -holes are playing an important role in the outcomes of (radio)fluorination reactions. Computational evidence suggests an energetic preference for fluorine adducts with the stronger σ-hole, reminiscent of hard/soft acid and base principles, where better electrostatic stabilization is achieved when the

• 63a induced an energetically-disfavoured twist in the fluorine adduct’s conformation (INTA’), raising its energy over that of 63b and decreasing the energy barrier between it and the reductive elimination transition state TSA’. Additionally, the role of the halogen bond acceptor in 61d is also poorly

• fluoroarene. From this, we might infer that adduct equilibration was occurring (e.g., 64b,c) to properly situate the fluorine prior to the reductive elimination event (refer to Figure 14). 2.5 Intramolecular halogen bonding in iodonium ylides Halogen bonding was encountered as numerous intra- and