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Search for "three-dimensional" in Full Text gives 165 result(s) in Beilstein Journal of Organic Chemistry.

Activated carbon as catalyst support: precursors, preparation, modification and characterization

  • Melanie Iwanow,
  • Tobias Gärtner,
  • Volker Sieber and
  • Burkhard König

Beilstein J. Org. Chem. 2020, 16, 1188–1202, doi:10.3762/bjoc.16.104

Graphical Abstract
  • with a production of 1011–1012 tons per year, followed by lignin as second most abundant raw material [16]. Lignin is a three-dimensional phenolic polymer and is responsible for the cementation of cellulose fibres in plants [17]. Hemicelluloses, predominantly xylan, are non-cellulosic polysaccharides
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Published 02 Jun 2020

The charge-assisted hydrogen-bonded organic framework (CAHOF) self-assembled from the conjugated acid of tetrakis(4-aminophenyl)methane and 2,6-naphthalenedisulfonate as a new class of recyclable Brønsted acid catalysts

  • Svetlana A. Kuznetsova,
  • Alexander S. Gak,
  • Yulia V. Nelyubina,
  • Vladimir A. Larionov,
  • Han Li,
  • Michael North,
  • Vladimir P. Zhereb,
  • Alexander F. Smol'yakov,
  • Artem O. Dmitrienko,
  • Michael G. Medvedev,
  • Igor S. Gerasimov,
  • Ashot S. Saghyan and
  • Yuri N. Belokon

Beilstein J. Org. Chem. 2020, 16, 1124–1134, doi:10.3762/bjoc.16.99

Graphical Abstract
  • 2,6-naphthalenedisulfonate (NDS, 2 equivalents) and the tetrahydrochloride salt of tetrakis(4-aminophenyl)methane (TAPM, 1 equivalent) in water gave a novel three-dimensional charge-assisted hydrogen-bonded framework (CAHOF, F-1). The framework F-1 was characterized by X-ray diffraction, TGA
  • Information File 1), so that the resulting three-dimensional network had no macro- or mesopores (Figure S1, Supporting Information File 1). The volume of the unit cell that was potentially accessible to a solvent was only 29.0 Å3, as calculated by PLATON [38]. The same crystal phase (F-1a) was present in F-1
  • (4) Å3. The resulting structure designated as F-1 (F-1a’ phase, Figure 2) had two ammonium cations and four sulfonate dianions in the asymmetric part of the unit cell, with no traces of water molecules. Its three-dimensional network is built by charge-assisted hydrogen bonds between the ions (Table
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Published 26 May 2020

Bipyrrole boomerangs via Pd-mediated tandem cyclization–oxygenation. Controlling reaction selectivity and electronic properties

  • Liliia Moshniaha,
  • Marika Żyła-Karwowska,
  • Joanna Cybińska,
  • Piotr J. Chmielewski,
  • Ludovic Favereau and
  • Marcin Stępień

Beilstein J. Org. Chem. 2020, 16, 895–903, doi:10.3762/bjoc.16.81

Graphical Abstract
  • spectrum is additionally complicated by the partially restricted rotation of the N,N-dimethylamide substituents in the NDA units. In conjunction with the helicity of the ring system, this restriction leads to effective diastereomerism. The three-dimensional structures of all boomerangs were modeled using
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Published 04 May 2020

Diversity-oriented synthesis of 17-spirosteroids

  • Benjamin Laroche,
  • Thomas Bouvarel,
  • Martin Louis-Sylvestre and
  • Bastien Nay

Beilstein J. Org. Chem. 2020, 16, 880–887, doi:10.3762/bjoc.16.79

Graphical Abstract
  • their characteristic 3D geometry [68]. In particular, with 17-spirosteroids [69][70][71][72][73][74][75][76], the three dimensional complexity of the steroid CD-ring system is expected to be substantially affected. Results and Discussion The first goal of this work aimed at synthesizing spirocyclic
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Published 28 Apr 2020

A systematic review on silica-, carbon-, and magnetic materials-supported copper species as efficient heterogeneous nanocatalysts in “click” reactions

  • Pezhman Shiri and
  • Jasem Aboonajmi

Beilstein J. Org. Chem. 2020, 16, 551–586, doi:10.3762/bjoc.16.52

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  • types of carbon nanomaterials, including a) zero-dimensional nanoparticles (NPs), b) one-dimensional nanotubes, c) two-dimensional graphene sheets, and d) three-dimensional mesoporous carbon have been reported in the literature [63]. In this regard, various functionalized carbon nanomaterials were
  • , copper nanoparticles-decorated three-dimensional graphene (3D graphene/Cu nanocomposite 87) was reported as a catalyst to perform Huisgen 1,3‐dipolar cycloadditions. Therein, the GO material was mixed with EDA to produce a stable suspension that was transferred to a teflon‐lined autoclave. After heating
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Published 01 Apr 2020

Synthesis and circularly polarized luminescence properties of BINOL-derived bisbenzofuro[2,3-b:3’,2’-e]pyridines (BBZFPys)

  • Ryo Takishima,
  • Yuji Nishii,
  • Tomoaki Hinoue,
  • Yoshitane Imai and
  • Masahiro Miura

Beilstein J. Org. Chem. 2020, 16, 325–336, doi:10.3762/bjoc.16.32

Graphical Abstract
  • fluorophore unit in certain light-emitting functional materials (Scheme 1) [14]. Meanwhile, organic optoelectronic materials with circularly polarized luminescence (CPL) characteristics have attracted significant research interests in recent years [18][19][20][21] for their potential applications in three
  • -dimensional displays [22], information storage systems [23], molecular photoswitches [24], etc. Among a series of chiral scaffolds for CPL emitting molecules, axially chiral 1,1’-bi-2-naphthol (BINOL) has been frequently adopted for the core structure owing to the availability of both enantiomers as well as
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Published 06 Mar 2020

Combination of multicomponent KA2 and Pauson–Khand reactions: short synthesis of spirocyclic pyrrolocyclopentenones

  • Riccardo Innocenti,
  • Elena Lenci,
  • Gloria Menchi and
  • Andrea Trabocchi

Beilstein J. Org. Chem. 2020, 16, 200–211, doi:10.3762/bjoc.16.23

Graphical Abstract
  • characterization of the newly-synthesized molecules gave evidence about structural and physicochemical properties with respect to a set of blockbuster drugs, and showed that such scaffolds are drug-like but more spherical and three-dimensional in character than the drugs. Keywords: chemical libraries
  • generation of high-quality small molecule collections, taking advantage of the stereochemical diversity, and of their three-dimensional shape and structural bias to develop lead compounds, specifically in the field of protein–protein interactions [3][4][5][6]. Spiranic rings such as spiroketals are present
  • shifting those compounds to a second cluster being positioned in the positive direction for both axes, together with drugs possessing large aromatic content, as benazepril and seroquel. The principal moments of inertia (PMI) analysis was also taken into account for the three-dimensional shape analysis of
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Published 12 Feb 2020

Perspective isomorphs – a new classification of molecular structures based on artistic and chemical concepts

  • Jannis Neumann,
  • Ansgar Schnurr and
  • Hermann A. Wegner

Beilstein J. Org. Chem. 2019, 15, 2319–2326, doi:10.3762/bjoc.15.224

Graphical Abstract
  • restricted to the scale of a molecule and the directionality of its interactions with other molecules. Nevertheless, the three-dimensional structure of a molecule is decisive for its characteristic properties and hence its function in biological systems and materials [2]. In contrast, artistic concepts of
  • Contextualization The understanding of space in chemistry is highly linked to the three-dimensional extensions of molecules and their directionality in chemical bonds, reactions, and processes. In this context, interactions, such as hydrogen-bonds [3], metal-coordination [4] or quadrupole interactions [5][6
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Published 30 Sep 2019

Halide metathesis in overdrive: mechanochemical synthesis of a heterometallic group 1 allyl complex

  • Ross F. Koby,
  • Nicholas R. Rightmire,
  • Nathan D. Schley,
  • Timothy P. Hanusa and
  • William W. Brennessel

Beilstein J. Org. Chem. 2019, 15, 1856–1863, doi:10.3762/bjoc.15.181

Graphical Abstract
  • -tri(tert-butyl)phenolate], for example, a Cs…CH3 contact of 3.596(5) Å contributes to its form as a 1D coordination polymer [33]. In the caesium salt of the gallium metallate [Cs(toluene)2{CN(GaMe3)2}], multiple Cs…CH3 interactions in the range from 3.54–3.64 Å help generate its three-dimensional
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Published 02 Aug 2019

Synthesis and conformational preferences of short analogues of antifreeze glycopeptides (AFGP)

  • Małgorzata Urbańczyk,
  • Michał Jewgiński,
  • Joanna Krzciuk-Gula,
  • Jerzy Góra,
  • Rafał Latajka and
  • Norbert Sewald

Beilstein J. Org. Chem. 2019, 15, 1581–1591, doi:10.3762/bjoc.15.162

Graphical Abstract
  • antifreeze activity, as well as to clarify the influence of hydrogen bonds on the preferred conformation of the molecule. Model AFGP analogues were investigated by NMR in order to elucidate the stereochemical influence of the amino acid configuration on the three-dimensional structure of the glycopeptides. A
  • synthesis, the best yields were achieved for incorporation of natural amino acids into the peptide chain, where 1.2 equiv of glycosylated threonine were applied. NMR measurements were performed in order to elucidate the stereochemical influence of the amino acid configuration on the three-dimensional
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Published 16 Jul 2019

Cyclobutane dication, (CH2)42+: a model for a two-electron four-center (2e-4c) Woodward–Hoffmann frozen transition state

  • G. K. Surya Prakash and
  • Golam Rasul

Beilstein J. Org. Chem. 2019, 15, 1475–1479, doi:10.3762/bjoc.15.148

Graphical Abstract
  • . The various levels of calculations including MP2/6-31G* indicated that the structure vi was not a minimum [11]. The 1,3-dehydro-5,7-adamantanediyl dication (iii) [7] with 2e-4c bonding was generated and identified by 13C NMR spectroscopic and theoretical methods corresponding to a three dimensional
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Published 03 Jul 2019

Photochemical generation of the 2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPO) radical from caged nitroxides by near-infrared two-photon irradiation and its cytocidal effect on lung cancer cells

  • Ayato Yamada,
  • Manabu Abe,
  • Yoshinobu Nishimura,
  • Shoji Ishizaka,
  • Masashi Namba,
  • Taku Nakashima,
  • Kiyofumi Shimoji and
  • Noboru Hattori

Beilstein J. Org. Chem. 2019, 15, 863–873, doi:10.3762/bjoc.15.84

Graphical Abstract
  • issues can be solved by using the NIR-two-photon (TP) excitation technique [44], in which a molecule is electronically excited to the same state generated by one-photon (OP) excitation in the UV–vis region [45]. In addition to the advantages of TP excitation, three-dimensional control of the electronic
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Published 10 Apr 2019

Application of olefin metathesis in the synthesis of functionalized polyhedral oligomeric silsesquioxanes (POSS) and POSS-containing polymeric materials

  • Patrycja Żak and
  • Cezary Pietraszuk

Beilstein J. Org. Chem. 2019, 15, 310–332, doi:10.3762/bjoc.15.28

Graphical Abstract
  • edges, chemically bonded with eight different or similar organic substituents so that it represents a truly hybrid architecture. The cubic silsesquioxane unit is characterized by a three-dimensional nanoscopic size structure with approximate Si–Si distance equal to 0.5 nm and an approximate R–R distance
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Published 04 Feb 2019

Adhesion, forces and the stability of interfaces

  • Robin Guttmann,
  • Johannes Hoja,
  • Christoph Lechner,
  • Reinhard J. Maurer and
  • Alexander F. Sax

Beilstein J. Org. Chem. 2019, 15, 106–129, doi:10.3762/bjoc.15.12

Graphical Abstract
  • metallic nanotubes with easily polarizable electron densities, and they are less frequently found in three-dimensional metals [35][37][38]. Delocalized density fluctuations allow for the induction of large dipoles or higher multipoles that enhance weak molecular interaction: It is characteristic of
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Published 11 Jan 2019

Lectins of Mycobacterium tuberculosis – rarely studied proteins

  • Katharina Kolbe,
  • Sri Kumar Veleti,
  • Norbert Reiling and
  • Thisbe K. Lindhorst

Beilstein J. Org. Chem. 2019, 15, 1–15, doi:10.3762/bjoc.15.1

Graphical Abstract
  • Streptomyces olivaceoviridis) [77][78]. This secreted protein was crystallized in 2010 by Patra et al., however, a three-dimensional structure has yet to be resolved [79]. Recently Nogueira et al. detected high titers of IgG antibodies against sMTL-13 in sera from TB patients, a response found to be diminished
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Published 02 Jan 2019

Ring-opening metathesis of some strained bicyclic systems; stereocontrolled access to diolefinated saturated heterocycles with multiple stereogenic centers

  • Zsanett Benke,
  • Melinda Nonn,
  • Márton Kardos,
  • Santos Fustero and
  • Loránd Kiss

Beilstein J. Org. Chem. 2018, 14, 2698–2707, doi:10.3762/bjoc.14.247

Graphical Abstract
  • of attention in synthetic organic chemistry, affording access to various highly functionalized, alkenylated molecular entities [1][2][3][4][5][6][7][8][9][10]. Highly functionalized three-dimensional organic scaffolds with multiple stereogenic centers as small molecular entities represent an
  • multiple stereogenic centers thus synthesized can be considered interesting scaffolds for further transformations in view of the access of novel three-dimensional functionalized scaffolds through cross-metathesis (CM). An illustrative example is shown on Scheme 7. Divinylated γ-lactam (±)-19 selected as a
  • stereogenic centers. The resulting diolefinated aminolactones, isoxazolines or lactam derivatives with multiple stereogenic centers might be considered to be interesting highly-functionalized three-dimensional compounds for further derivatizations. Extensions of the ROM of various bicyclic, conformationally
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Published 24 Oct 2018

Impact of Pseudomonas aeruginosa quorum sensing signaling molecules on adhesion and inflammatory markers in endothelial cells

  • Carmen Curutiu,
  • Florin Iordache,
  • Veronica Lazar,
  • Aurelia Magdalena Pisoschi,
  • Aneta Pop,
  • Mariana Carmen Chifiriuc and
  • Alina Maria Hoban

Beilstein J. Org. Chem. 2018, 14, 2580–2588, doi:10.3762/bjoc.14.235

Graphical Abstract
  • deficient strains differ in size and stability of the structure, being more flexible due to the production of QS-regulated extracellular DNA [8], which acts as a stabilizer of three-dimensional biofilm structure [8]. In patients with cystic fibrosis, the growth of bacteria in biofilm determines aggravation
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Published 05 Oct 2018

Calixazulenes: azulene-based calixarene analogues – an overview and recent supramolecular complexation studies

  • Paris E. Georghiou,
  • Shofiur Rahman,
  • Abdullah Alodhayb,
  • Hidetaka Nishimura,
  • Jaehyun Lee,
  • Atsushi Wakamiya and
  • Lawrence T. Scott

Beilstein J. Org. Chem. 2018, 14, 2488–2494, doi:10.3762/bjoc.14.225

Graphical Abstract
  • relatively facile and reproducible syntheses of the classical calix[n]arenes 1 in which n = 4, 6 or 8, with phenolic groups linked or bridged via methylene groups to form defined three-dimensional basket-like cavities with “upper” or “lower” rims, were developed by Gutsche and co-workers [4][5][6]. As a
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Published 25 Sep 2018

Nucleoside macrocycles formed by intramolecular click reaction: efficient cyclization of pyrimidine nucleosides decorated with 5'-azido residues and 5-octadiynyl side chains

  • Jiang Liu,
  • Peter Leonard,
  • Sebastian L. Müller,
  • Constantin Daniliuc and
  • Frank Seela

Beilstein J. Org. Chem. 2018, 14, 2404–2410, doi:10.3762/bjoc.14.217

Graphical Abstract
  • = 173°) [48] adopt an anti-conformation [49]. The conformation of the 2’-deoxyribofuranosyl moiety of 8 shows an C3’-endo envelope pucker (4E, N-type) in the solid state with a pseudorotational phase angle P = 50.2(2)° and a maximum amplitude of τm = 38.7(1)°. The extended structure forms a three
  • -dimensional network consisting of a linear unit connected by hydrogen bonds between N3–H and the triazole N3’’ of a second molecule (Figure 3, Supporting Information File 1, Figures S3 and S4). Additionally, the molecules are bridged by water molecules connecting O2 of the base moiety and N2’’ of the triazole
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Published 13 Sep 2018

Synthesis and post-functionalization of alternate-linked-meta-para-[2n.1n]thiacyclophanes

  • Wout De Leger,
  • Koen Adriaensen,
  • Koen Robeyns,
  • Luc Van Meervelt,
  • Joice Thomas,
  • Björn Meijers,
  • Mario Smet and
  • Wim Dehaen

Beilstein J. Org. Chem. 2018, 14, 2190–2197, doi:10.3762/bjoc.14.192

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  • ; Introduction The ability of cyclophanes to form three-dimensional cavities is interesting for various potential applications, e.g., as supramolecular hosts. Synthetic procedures towards novel cyclophanes have attracted much interest in the scientific community [1][2][3][4]. An interesting subclass of
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Published 22 Aug 2018

Evaluation of dispersion type metal···π arene interaction in arylbismuth compounds – an experimental and theoretical study

  • Ana-Maria Preda,
  • Małgorzata Krasowska,
  • Lydia Wrobel,
  • Philipp Kitschke,
  • Phil C. Andrews,
  • Jonathan G. MacLellan,
  • Lutz Mertens,
  • Marcus Korb,
  • Tobias Rüffer,
  • Heinrich Lang,
  • Alexander A. Auer and
  • Michael Mehring

Beilstein J. Org. Chem. 2018, 14, 2125–2145, doi:10.3762/bjoc.14.187

Graphical Abstract
  • of a neighboring molecule in a way that each bismuth atom interacts with three oxygen atoms of different neighbors. In the resulting three-dimensional structure, one molecule of 3 interacts with six other molecules (Figure 6b). Similar Bi···O interactions are also found in tris(2-methoxyphenyl)- and
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Published 15 Aug 2018

A self-assembled photoresponsive gel consisting of chiral nanofibers

  • Lei Zou,
  • Dan Han,
  • Zhiyi Yuan,
  • Dongdong Chang and
  • Xiang Ma

Beilstein J. Org. Chem. 2018, 14, 1994–2001, doi:10.3762/bjoc.14.174

Graphical Abstract
  • by three-dimensional networks through self-assembly have drawn significant attention in the past decades. They are normally fabricated by means of noncovalent intermolecular interactions [3], such as π–π stacking, hydrogen bonding, van der Waals forces, hydrophobic, electrostatic, host–guest and
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Published 01 Aug 2018

Recent applications of chiral calixarenes in asymmetric catalysis

  • Mustafa Durmaz,
  • Erkan Halay and
  • Selahattin Bozkurt

Beilstein J. Org. Chem. 2018, 14, 1389–1412, doi:10.3762/bjoc.14.117

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  • Analysis Technological Application and Research Center (UBATAM), Usak University, Usak, Turkey Vocational School of Health Services, Usak University, 64200 Usak, Turkey 10.3762/bjoc.14.117 Abstract The use of calixarenes in asymmetric catalysis is receiving increasing attention due to their tunable three
  • -dimensional molecular platforms along with their easy syntheses and versatile modification at the upper and lower rims. This review summarizes the recent progress of synthesis and use of chiral calixarenes in asymmetric syntheses which emerged later than 2010. Keywords: asymmetric catalysis; chiral
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Published 08 Jun 2018

Nanoreactors for green catalysis

  • M. Teresa De Martino,
  • Loai K. E. A. Abdelmohsen,
  • Floris P. J. T. Rutjes and
  • Jan C. M. van Hest

Beilstein J. Org. Chem. 2018, 14, 716–733, doi:10.3762/bjoc.14.61

Graphical Abstract
  • tuned by varying their initial molecular components or the number of generations they possess [91][92]. They can assemble in a spherical shape, and within the three-dimensional structure, an interior void is present wherein to accommodate other molecules [93]. Catalysis in dendrimers: The controlled
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Published 29 Mar 2018

Solvent-free copper-catalyzed click chemistry for the synthesis of N-heterocyclic hybrids based on quinoline and 1,2,3-triazole

  • Martina Tireli,
  • Silvija Maračić,
  • Stipe Lukin,
  • Marina Juribašić Kulcsár,
  • Dijana Žilić,
  • Mario Cetina,
  • Ivan Halasz,
  • Silvana Raić-Malić and
  • Krunoslav Užarević

Beilstein J. Org. Chem. 2017, 13, 2352–2363, doi:10.3762/bjoc.13.232

Graphical Abstract
  • notation as R22(18) [54]. Although the same motif formed by the analogous hydrogen bond is observed in other three structures (Table S3, Supporting Information File 1), the final supramolecular structures of 5–8 differ, from one-dimensional chains to three-dimensional network. It should be mentioned that
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Published 06 Nov 2017
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