Supramolecular assembly of hypervalent iodine macrocycles and alkali metals

• Krishna Pandey,
• Lucas X. Orton,
• Grayson Venus,
• Waseem A. Hussain,
• Toby Woods,
• Lichang Wang and
• Kyle N. Plunkett

Beilstein J. Org. Chem. 2025, 21, 1095–1103, doi:10.3762/bjoc.21.87

• Krishna Pandey Lucas X. Orton Grayson Venus Waseem A. Hussain Toby Woods Lichang Wang Kyle N. Plunkett School of Chemical and Biomolecular Sciences, Southern Illinois University, Carbondale, IL 62901, United States George L. Clark X-ray Facility and 3M Materials Laboratory, University of Illinois

• NaBArF24. Supporting Information Supporting Information File 29: Detailed experimental procedures, NMR spectra, and X-ray crystallography details. Supporting Information File 30: Crystallographic Information Files for 1/LiBArF20 and 1/NaBArF24. Funding We thank the National Science Foundation (#2003654

Recent total synthesis of natural products leveraging a strategy of enamide cyclization

• Chun-Yu Mi,
• Jia-Yuan Zhai and
• Xiao-Ming Zhang

Beilstein J. Org. Chem. 2025, 21, 999–1009, doi:10.3762/bjoc.21.81

• cyclization to form products in high yields and excellent enantioselectivities. Notably, only a single diastereomer was produced in each case. The single-crystal X-ray crystallography revealed a cis-configuration for both the alkene and ketone substituents on the enamide, indicating that the intramolecular

Studies on the syntheses of β-carboline alkaloids brevicarine and brevicolline

• Benedek Batizi,
• Patrik Pollák,
• András Dancsó,
• Péter Keglevich,
• Gyula Simig,
• Balázs Volk and
• Mátyás Milen

Beilstein J. Org. Chem. 2025, 21, 955–963, doi:10.3762/bjoc.21.79

• catalyst, overreduced product 31, i.e., the tetrahydro derivative of racemic brevicolline ((±)-1) was obtained in 91% yield. Structure determination of 31 was supported by single-crystal X-ray diffraction, as well (Figure 2). Changing the catalyst [Pd(OH)2, Ru, Rh], did not alter the course of the reaction

• -carbolines. Some surprising reactions were also observed, such as the unexpected formation of racemic tetrahydrobrevicolline and the trifluoroethylation of the pyrrole moiety, which can also serve as favorable starting points for further research. The structure of brevicolline ((S)-1) and brevicarine (2). X

• -ray structure of compound 31. Synthesis of racemic brevicolline ((±)-1) starting from 1-methyl-9H-β-carbolin-4-yl trifluoromethanesulfonate (3). Synthesis of brevicarine (2) from brevicolline ((S)-1). First total synthesis of brevicarine (2). Multistep synthesis of brevicarine (2) starting from

Harnessing tethered nitreniums for diastereoselective amino-sulfonoxylation of alkenes

• Shyam Sathyamoorthi,
• Appasaheb K. Nirpal,
• Dnyaneshwar A. Gorve and
• Steven P. Kelley

Beilstein J. Org. Chem. 2025, 21, 947–954, doi:10.3762/bjoc.21.78

• diacetate was necessary for product formation (Table 3, products 20 and 25–28). X-ray crystallographic analysis of 20 (CCDC 2391529) allowed us to unambiguously determine its identity and relative stereochemistry, and we have assigned other products by analogy. A variety of carbamate substrates were

• functional group compatibility. Supporting Information Supporting Information File 2: Additional experimental details including reaction procedures, X-ray crystallographic data, and NMR spectra of synthesized compounds. Acknowledgements Justin Douglas and Sarah Neuenswander (KU NMR Lab) are acknowledged

A convergent synthetic approach to the tetracyclic core framework of khayanolide-type limonoids

• Zhiyang Zhang,
• Jialei Hu,
• Hanfeng Ding,
• Li Zhang and
• Peirong Rao

Beilstein J. Org. Chem. 2025, 21, 926–934, doi:10.3762/bjoc.21.75

• tricyclo[4.2.110,30.11,4]decane ring system. Additionally, krishnolides A and C contain 9–11 stereogenic centers and exhibit diverse oxidation patterns. Their relative and absolute configurations were determined through NMR, HRESIMS and ECD experiments, as well as single crystal X-ray diffraction analysis

• 10 was unequivocally determined through X-ray crystallographic analysis (ORTEP drawing, Scheme 4). Further optimization by elevating the reaction temperature did not noticeably alter the ratio of 32 and 33 (Table 1, entries 8 and 9). Moreover, attempts to apply interrupted Nazarov cyclization with

• ). Construction of α-iodoenone 13. Construction of aldehyde 14. Synthesis of the advanced intermediate 10 (in the X ray structure of 10 solvent molecule is omitted for clarity). Optimization of the interrupted Nazarov cyclization.a Supporting Information Deposition number 2406738 contains the supplementary

Silver(I) triflate-catalyzed post-Ugi synthesis of pyrazolodiazepines

• Muhammad Hasan,
• Anatoly A. Peshkov,
• Syed Anis Ali Shah,
• Andrey Belyaev,
• Chang-Keun Lim,
• Shunyi Wang and
• Vsevolod A. Peshkov

Beilstein J. Org. Chem. 2025, 21, 915–925, doi:10.3762/bjoc.21.74

• trifluoromethyl and nitro groups. Furthermore, substrates 15m–o derived from aliphatic amines, also performed well, furnishing pyrazolodiazepines 16m–o in up to 89% yield. The structure of 16m, a representative compound of this series, was confirmed through single-crystal X-ray diffraction (scXRD) analysis

Dicarboxylate recognition based on ultracycle hosts through cooperative hydrogen bonding and anion–π interactions

• Wen-Hui Mi,
• Teng-Yu Huang,
• Xu-Dong Wang,
• Yu-Fei Ao,
• Qi-Qiang Wang and
• De-Xian Wang

Beilstein J. Org. Chem. 2025, 21, 884–889, doi:10.3762/bjoc.21.72

• . Synthesis of ultracycles. Supporting Information Supporting Information File 4: Experimental details and characterization data (including 1H NMR, 13C NMR, IR, and HRMS of precursor compounds and ultracycles, X-ray data for B4aH, theoretical calculations, and NMR titration data). Funding Financial support

Data accessibility in the chemical sciences: an analysis of recent practice in organic chemistry journals

• Sally Bloodworth,
• Cerys Willoughby and
• Simon J. Coles

Beilstein J. Org. Chem. 2025, 21, 864–876, doi:10.3762/bjoc.21.70

• ., b.p., elemental analysis, optical rotation), thermochemical data, computational data, structure information, cell culture and bioassay data; and excludes X-ray crystallography. ‘NMR’ refers to those examples where a distinct policy for NMR spectroscopic data is available, in addition to the ‘All data

Unraveling cooperative interactions between complexed ions in dual-host strategy for cesium salt separation

• Zhihua Liu,
• Ya-Zhi Chen,
• Ji Wang,
• Qingling Nie,
• Wei Zhao and
• Biao Wu

Beilstein J. Org. Chem. 2025, 21, 845–853, doi:10.3762/bjoc.21.68

• by the joint Cambridge Crystallographic Data Centre and Fachinformationszentrum Karlsruhe Access Structures service via https://www.ccdc.cam.ac.uk/. Supporting Information File 50: Nuclear magnetic resonance (NMR), mass and X-ray diffraction data. Acknowledgements We thank support from Analysis

4-(1-Methylamino)ethylidene-1,5-disubstituted pyrrolidine-2,3-diones: synthesis, anti-inflammatory effect and in silico approaches

• Nguyen Tran Nguyen,
• Vo Viet Dai,
• Luc Van Meervelt,
• Do Thi Thao and
• Nguyen Minh Thong

Beilstein J. Org. Chem. 2025, 21, 817–829, doi:10.3762/bjoc.21.65

• spectroscopy, the structure of 4-(1-methylamino)ethylidene-1,5-diphenylpyrrolidine-2,3-dione (5a) was also verified through single-crystal X-ray diffraction. Furthermore, the synthesized molecules were evaluated for compliance with established drug-likeness rules (Lipinski, Veber, Ghose, Egan, and Muegge), as

• single-crystal X-ray diffraction [19]. According to a previous publication, the condensation between pyrrolidine-2,3-diones and an amine as nucleophile normally occurred at the 3-position of nitrogen-containing heterocyclic ring which results in the corresponding enamine product [18]. However, the

• the weaker base, 4-methoxybenzylamine. X-ray study of 4-(1-methylamino)ethylidene-1,5-diphenylpyrrolidine-2,3-dione (5a) Compound 5a crystallizes in the triclinic space group P−1, with one molecule in the asymmetric unit (Figure 2). The pyrrolidine ring is planar (r.m.s. deviation = 0.004 Å) and forms

Acyclic cucurbit[n]uril bearing alkyl sulfate ionic groups

• Christian Akakpo,
• Peter Y. Zavalij and
• Lyle Isaacs

Beilstein J. Org. Chem. 2025, 21, 717–726, doi:10.3762/bjoc.21.55

• alkyl sulfate ionic groups. The X-ray crystal structure of the C1·Me6CHDA complex is reported. Host C1 is significantly less soluble in water (4 mM) compared to the analogous acyclic CB[n] host M1 which features sulfonate ionic groups (346 mM). Host C1 does not undergo significant self-association

• specific guest. C1 binds more tightly to quaternary ammonium guests compared to the corresponding primary ammonium ions. Keywords: cucurbituril; host–guest chemistry; isothermal titration calorimetry; molecular container; X-ray crystallography; Introduction Molecular recognition interactions are key

• spectroscopic characterization of C1 along with determination of its inherent aqueous solubility and self-association properties. Next, we present the X-ray crystal structure of C1 as its C1·Me6CHDA complex. Subsequently, we describe a qualitative investigation of C1·guest and M1·guest complexation by 1H NMR

Origami with small molecules: exploiting the C–F bond as a conformational tool

• Patrick Ryan,
• Ramsha Iftikhar and
• Luke Hunter

Beilstein J. Org. Chem. 2025, 21, 680–716, doi:10.3762/bjoc.21.54

Photochemically assisted synthesis of phenacenes fluorinated at the terminal benzene rings and their electronic spectra

• Yuuki Ishii,
• Minoru Yamaji,
• Fumito Tani,
• Kenta Goto,
• Yoshihiro Kubozono and
• Hideki Okamoto

Beilstein J. Org. Chem. 2025, 21, 670–679, doi:10.3762/bjoc.21.53

• -phenacenes for clarifying the different solid-fluorescence behavior between the parent and fluorinated phenacenes. Although we have extensively examined crystallization of F8-phenacenes, no single crystal suitable for an X-ray diffraction analysis was obtained. The crystalline structural analysis is still

Recent advances in allylation of chiral secondary alkylcopper species

• Minjae Kim,
• Gwanggyun Kim,
• Doyoon Kim,
• Jun Hee Lee and
• Seung Hwan Cho

Beilstein J. Org. Chem. 2025, 21, 639–658, doi:10.3762/bjoc.21.51

• transfer, X-ray crystallographic analysis of the (tert-butyl)(adamantyl)Bpin·Li(THF)2 complex revealed that the B–(adamantyl) bond is shorter than the B–(tert-butyl) bond (1.673 vs 1.692 Å). DFT calculations further illuminated the underlying mechanism by comparing two distinct transition states: TS1

Entry to 2-aminoprolines via electrochemical decarboxylative amidation of N‑acetylamino malonic acid monoesters

• Olesja Koleda,
• Janis Sadauskis,
• Darja Antonenko,
• Edvards Janis Treijs,
• Raivis Davis Steberis and
• Edgars Suna

Beilstein J. Org. Chem. 2025, 21, 630–638, doi:10.3762/bjoc.21.50

• NMR methods, and all attempts to obtain crystals suitable for X-ray crystallographic analysis were unsuccessful. N-Protected 2-aminoproline derivatives 6 are relatively stable under basic conditions as evidenced by successful hydrolysis of the ester moiety in 6a,d,e using aqueous LiOH to provide acids

Photocatalyzed elaboration of antibody-based bioconjugates

• Marine Le Stum,
• Eugénie Romero and
• Gary A. Molander

Beilstein J. Org. Chem. 2025, 21, 616–629, doi:10.3762/bjoc.21.49

• such methods are generally reported with a heterogeneous DAR, the group developed a site-specific approach leading to a homogeneous DAR 2, thanks to a photoreactive Fc-binding peptide derivative (pFcBP) containing a photoleucine (pLeu) [46]. By analyzing the X-ray crystal structure of IgG, the

Study of the interaction of 2H-furo[3,2-b]pyran-2-ones with nitrogen-containing nucleophiles

• Constantine V. Milyutin,
• Andrey N. Komogortsev and
• Boris V. Lichitsky

Beilstein J. Org. Chem. 2025, 21, 556–563, doi:10.3762/bjoc.21.44

• unambiguously confirmed by X-ray diffraction. Keywords: allomaltol; enamines; 2H-furo[3,2-b]pyran-2-ones; pyrazol-3-ones; recyclization; Introduction Substituted furan-2(5H)-ones (butenolides) are widely used as precursors for the preparation of diverse types of heterocyclic compounds possessing various

• % yield. Based on X-ray analysis data the synthesized compound 4a is 2H-furo[3,2-b]pyran-2,7(3H)-dione bearing an enamine fragment at the furanone ring (Scheme 2b). It’s interesting to note that prepared product 4a exists in form of the Z-isomer. This configuration is apparently stabilized by an

• established by X-ray analysis. The proposed mechanism of the considered processes is outlined at Scheme 8. Initially, the free nitrogen nucleophile is reversibly generated from the corresponding hydrochloride or acetate. Next, acid-catalyzed addition of the amine component to the carbon atom of the aroyl

Vinylogous functionalization of 4-alkylidene-5-aminopyrazoles with methyl trifluoropyruvates

• Judit Hostalet-Romero,
• Laura Carceller-Ferrer,
• Gonzalo Blay,
• Amparo Sanz-Marco,
• José R. Pedro and
• Carlos Vila

Beilstein J. Org. Chem. 2025, 21, 533–540, doi:10.3762/bjoc.21.41

• to determine the role of the squaramide. The relative configuration of the stereogenic centres in compound 5aca was determined by X-ray crystallographic analysis (Scheme 3) [33]; the relative configurations of the other compounds 5 were assigned on the assumption of a uniform mechanistic pathway

• chromatography. Diastereoisomeric ratio (dr) determined by 1H NMR of the crude reaction mixture. Plausible mechanism and X-ray structure of compound 5aca. Optimization of the reaction conditions.a Supporting Information Supporting Information File 14: Detailed experimental procedures, characterization data, and

• copies of 1H NMR and 13C NMR spectra. Acknowledgements Access to NMR, MS, and X-ray facilities from the Servei Central de Suport a la Investigació Experimental (SCSIE)-UV and the NMR U26 facility of ICTS “NANBIOSIS” is acknowledged. Funding L.C.-F. thanks the Universitat de València for a predoctoral

Cryptophycin unit B analogues

• Thomas Schachtsiek,
• Jona Voss,
• Maren Hamsen,
• Beate Neumann,
• Hans-Georg Stammler and
• Norbert Sewald

Beilstein J. Org. Chem. 2025, 21, 526–532, doi:10.3762/bjoc.21.40

• control of equivalents and pH, or Leuckart–Wallach-like reaction with ammonium formate and Pd/C [25] provided monomethylaniline 7 in 37% and 35% yield, respectively. The absolute structure of monomethylaniline 7 was confirmed by single-crystal X-ray diffraction measurements (Figure 2). Compound 7

• conjugation handles in unit B. IC50 values given against (a) CCRF-CEM [20] and (b) KB-3-1 [21] cell lines. C: Cryptophycin-52 derivatives synthesised in this work. Molecular structure of Boc-ᴅ-Phe(4-NHMe)-OMe 7 as determined by single-crystal X-ray diffraction measurements. Thermal ellipsoids depicted at 50

Deep-blue emitting 9,10-bis(perfluorobenzyl)anthracene

• Long K. San,
• Sebastian Balser,
• Brian J. Reeves,
• Tyler T. Clikeman,
• Yu-Sheng Chen,
• Steven H. Strauss and
• Olga V. Boltalina

Beilstein J. Org. Chem. 2025, 21, 515–525, doi:10.3762/bjoc.21.39

• photochemical reaction. Its structure was elucidated by NMR spectroscopy and single crystal X-ray diffractometry. The latter revealed no π–π interaction between neighboring ANTH cores. A combination of high photoluminescence quantum yield (PLQY) of 0.85 for 9,10-ANTH(BnF)2, its significantly improved

• ratio was found to be 1.74 (theoretical = 1.75), confirming the composition to be ANTH(BnF)2. Slow evaporation of a CH2Cl2 solution of 9,10-ANTH(BnF)2 at 2 °C afforded off-white plates suitable for X-ray diffraction. The structure shown in Figure 2 (top panel) confirmed the 9,10-substitution pattern

• concentrations used for ANTH, 9,10-ANTH(BnF)2, and quinine sulfate were 1.89, 1.14, and 1.94 (10−5 M), respectively. Relative quantum yields were calculated using the following equation referenced to quinine sulfate (Φf = 0.55 in 0.1 M H2SO4): X-ray crystallography The diffraction-quality single crystals of 9

Unprecedented visible light-initiated topochemical [2 + 2] cycloaddition in a functionalized bimane dye

• Metodej Dvoracek,
• Brendan Twamley,
• Mathias O. Senge and
• Mikhail A. Filatov

Beilstein J. Org. Chem. 2025, 21, 500–509, doi:10.3762/bjoc.21.37

• promising strategy for synthesizing substituted cyclobutanes without the need for ultraviolet irradiation. Keywords: bimane; [2 + 2] cycloaddition; fluorescence; topochemical polymerization; X-ray crystallography; Introduction Topochemical polymerizations refer to polymerization reactions occurring in the

• Figure 2b. We hypothesized that this reaction occurred in the solid state, and further investigations confirmed this. To validate our findings, we employed single-crystal X-ray diffraction, which revealed the packing mode in the crystal and identified any photoproducts formed. Two additional compounds

• included two additional bimane samples, Me2B and Me4B. These samples were crystallized from a MeOH–DCM 1:1 (v/v) mixture which was left to slowly evaporate over the course of several days at room temperature, followed by single-crystal X-ray diffraction to determine their structure (Figure 4) and crystal

Synthesis of N-acetyl diazocine derivatives via cross-coupling reaction

• Thomas Brandt,
• Pascal Lentes,
• Jeremy Rudtke,
• Michael Hösgen,
• Christian Näther and
• Rainer Herges

Beilstein J. Org. Chem. 2025, 21, 490–499, doi:10.3762/bjoc.21.36

• -substituted diazocines were prepared via Stille, Suzuki, and Buchwald–Hartwig reactions. X-ray structures are presented for derivatives 1, 2 and 7. Keywords: cross-coupling; diazocine; N-acetyl diazocine; photoisomerization; photoswitch; thermal relaxation; Introduction Diazocines are frequently used

• /data_request/cif. Cambridge CB2 1EZ, UK; fax: +44 1223 336033. Supporting Information File 14: Synthetic procedures, UV–vis and NMR switching experiments, copies of UV–vis and NMR spectra, and X-ray crystallographic data. Funding The authors thankfully acknowledge financial support by the Deutsche

Photomechanochemistry: harnessing mechanical forces to enhance photochemical reactions

• Francesco Mele,
• Ana M. Constantin,
• Andrea Porcheddu,
• Raimondo Maggi,
• Giovanni Maestri,
• Nicola Della Ca’ and
• Luca Capaldo

Beilstein J. Org. Chem. 2025, 21, 458–472, doi:10.3762/bjoc.21.33

• technique for high-throughput experimentation [83]. A further area of development would be the possibility of integrating options for the in-situ monitoring of reactions, such as X-ray and Raman techniques [47][48][84][85][86][87]. In conclusion, in recognizing that both photochemistry and mechanochemistry

Electrochemical synthesis of cyclic biaryl λ³-bromanes from 2,2’-dibromobiphenyls

• Andrejs Savkins and
• Igors Sokolovs

Beilstein J. Org. Chem. 2025, 21, 451–457, doi:10.3762/bjoc.21.32

• extractive workup followed by reversed-phase chromatography and its structure was unambiguously confirmed by X-ray crystallography (Table 1, graphic). Gratifyingly, a two-fold increase in the yield was achieved by a slight reduction of the current density to j = 8 mA·cm−2 (entry 2 vs entry 1 in Table 1). A

• Cambridge Crystallographic Data Centre and allocated the deposition number CCDC 2404146. Supporting Information File 6: Experimental procedures, analytical and spectroscopic data for new compounds, copies of NMR spectra, and X-ray crystallographic data. Acknowledgements The authors thank Dr. Sergey

• Belyakov from the Latvian Institute of Organic Synthesis (LIOS) for X-ray crystallographic analysis. We also thank Prof. Edgars Suna (LIOS) for helpful discussions and assistance in preparing the manuscript. Funding This work was financially supported by Latvian Science Council grant LZP-2021/1-0595.

The effect of neighbouring group participation and possible long range remote group participation in O-glycosylation

• Rituparna Das and
• Balaram Mukhopadhyay

Beilstein J. Org. Chem. 2025, 21, 369–406, doi:10.3762/bjoc.21.27