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Search for "isomerization" in Full Text gives 417 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Synthesis of N-acetyl diazocine derivatives via cross-coupling reaction

  • Thomas Brandt,
  • Pascal Lentes,
  • Jeremy Rudtke,
  • Michael Hösgen,
  • Christian Näther and
  • Rainer Herges

Beilstein J. Org. Chem. 2025, 21, 490–499, doi:10.3762/bjoc.21.36

Graphical Abstract
  • subsequently activated with light at the site of illness with high spatiotemporal resolution. Thus, collateral damage in the surrounding healthy tissue can be avoided. In addition, the quantitative thermal back-isomerization from the active E to the inactive Z configuration prevents contamination and
  • efficiency. In any case the light-induced geometry change via isomerization should selectively control the interaction between the inhibitor and the receptor [21]. Currently there is only one example reported in the literature for the incorporation of N-acetyl diazocines into biologically active molecules
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Published 04 Mar 2025

New tandem Ugi/intramolecular Diels–Alder reaction based on vinylfuran and 1,3-butadienylfuran derivatives

  • Yuriy I. Horak,
  • Roman Z. Lytvyn,
  • Andrii R. Vakhula,
  • Yuriy V. Homza,
  • Nazariy T. Pokhodylo and
  • Mykola D. Obushak

Beilstein J. Org. Chem. 2025, 21, 444–450, doi:10.3762/bjoc.21.31

Graphical Abstract
  •  2). However, if maleic acid was used instead of its monoanilide, then an aromatic furan product was obtained (Scheme 3). Most likely, the presence of a carboxyl group near the hydrogen in the 3-position of the furan ring contributes to its shift and isomerization to a more thermodynamically
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Published 26 Feb 2025

Synthesis, structure, ionochromic and cytotoxic properties of new 2-(indolin-2-yl)-1,3-tropolones

  • Yurii A. Sayapin,
  • Eugeny A. Gusakov,
  • Inna O. Tupaeva,
  • Alexander D. Dubonosov,
  • Igor V. Dorogan,
  • Valery V. Tkachev,
  • Anna S. Goncharova,
  • Gennady V. Shilov,
  • Natalia S. Kuznetsova,
  • Svetlana Y. Filippova,
  • Tatyana A. Krasnikova,
  • Yanis A. Boumber,
  • Alexey Y. Maksimov,
  • Sergey M. Aldoshin and
  • Vladimir I. Minkin

Beilstein J. Org. Chem. 2025, 21, 358–368, doi:10.3762/bjoc.21.26

Graphical Abstract
  • reactions of 2-methylquinolines with 3,5-di-(tert-butyl)-1,2-benzoquinone [1] and benzophenones with o-chloranil [15]. The norcaradiene derivatives 5, formed in the next step by the intramolecular cyclization reaction of 4, undergo thermal isomerization into 2,3-dihydrotropolones 6. The formation of 2
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Published 17 Feb 2025

Molecular diversity of the reactions of MBH carbonates of isatins and various nucleophiles

  • Zi-Ying Xiao,
  • Jing Sun and
  • Chao-Guo Yan

Beilstein J. Org. Chem. 2025, 21, 286–295, doi:10.3762/bjoc.21.21

Graphical Abstract
  • have been obtained by DABCO-catalyzed dimerization of MBH carbonates of isatin in ODCB at high temperature (150 °C), which could be converted to bisspirooxindole derivatives via the isomerization of the double bond and a sequential thermal 6π-electrocyclic ring-closure process [30]. Here, the novel
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Published 06 Feb 2025

Effect of substitution position of aryl groups on the thermal back reactivity of aza-diarylethene photoswitches and prediction by density functional theory

  • Misato Suganuma,
  • Daichi Kitagawa,
  • Shota Hamatani and
  • Seiya Kobatake

Beilstein J. Org. Chem. 2025, 21, 242–252, doi:10.3762/bjoc.21.16

Graphical Abstract
  • -withdrawing substituents on the N-aryl moieties enhanced the thermal stability of the Z-isomers while maintaining the advantageous photoswitching properties upon irradiation with red light [52]. The effect of substituents on the thermal cis–trans isomerization of azobenzenes has also been widely studied, and
  • time scale [54]. Langton and co-workers demonstrated that the thermal isomerization rate of azobenzenes can be tuned over a time scale spanning 107 seconds by introducing appropriate chalcogens and halogens at the ortho-position of the benzene rings [55]. Thus, investigation of the strategies to
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Published 31 Jan 2025

Streamlined modular synthesis of saframycin substructure via copper-catalyzed three-component assembly and gold-promoted 6-endo cyclization

  • Asahi Kanno,
  • Ryo Tanifuji,
  • Satoshi Yoshida,
  • Sota Sato,
  • Saori Maki-Yonekura,
  • Kiyofumi Takaba,
  • Jungmin Kang,
  • Kensuke Tono,
  • Koji Yonekura and
  • Hiroki Oguri

Beilstein J. Org. Chem. 2025, 21, 226–233, doi:10.3762/bjoc.21.14

Graphical Abstract
  • reaction involves an in situ generation of the iminium cation A followed by isomerization to the thermodynamically more stable iminium cation B. Subsequent nucleophilic attack of a copper acetylide enabled regioselective C–C bond formation at the C11 position. After removal of the cyclic acetal, the
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Published 28 Jan 2025

Dioxazolones as electrophilic amide sources in copper-catalyzed and -mediated transformations

  • Seungmin Lee,
  • Minsuk Kim,
  • Hyewon Han and
  • Jongwoo Son

Beilstein J. Org. Chem. 2025, 21, 200–216, doi:10.3762/bjoc.21.12

Graphical Abstract
  • dioxazolone 7. Subsequently, nitrene insertion of INT-12 into the Cu–C bond, forms INT-13, which then undergoes isomerization and protodemetalation, followed by catalyst regeneration, as suggested by the DFT calculations. Finally, the nucleophilic addition of the amine to the electrophilic intermediate INT-15
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Published 22 Jan 2025

Cu(OTf)2-catalyzed multicomponent reactions

  • Sara Colombo,
  • Camilla Loro,
  • Egle M. Beccalli,
  • Gianluigi Broggini and
  • Marta Papis

Beilstein J. Org. Chem. 2025, 21, 122–145, doi:10.3762/bjoc.21.7

Graphical Abstract
  • formation releasing Cu(OTf)2. The final bicyclic product 33 arises from isomerization and water elimination. Recently, Singh's research group developed a cascade process to access imidazo[1,2-a]pyridines-linked isoxazoles 35. Isoxazole carbaldehydes treated with 2-aminopyridines and isonitriles in the
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Published 14 Jan 2025

Recent advances in organocatalytic atroposelective reactions

  • Henrich Szabados and
  • Radovan Šebesta

Beilstein J. Org. Chem. 2025, 21, 55–121, doi:10.3762/bjoc.21.6

Graphical Abstract
  • activation of propargylic aldehydes with catalyst Int-1. Another critical feature was the ability of the organocatalyst to promote the Z-selective isomerization of Int-2 to Int-3. In a related fashion, Wang and co-workers developed an atroposelective heterocycloaddition [19]. The iminium-activated alkynals 4
  • reaction pathway was proposed [56]. The first step is a CPA C27-catalyzed condensation giving rise to the imine intermediate followed by isomerization to the enamine stabilized by CPA. An enantioselective intramolecular cyclization followed by dehydration then afford the aromatic ring and desired product
  • consists of isomerization and another catalyst activation promoting an intramolecular Michael addition. The organocatalyst is freed, and cyclization product Int-62 undergoes racemization to form Int-64. The identical intermediate Int-64 is formed by catalyst activation and direct nucleophilic addition. In
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Published 09 Jan 2025

Emerging trends in the optimization of organic synthesis through high-throughput tools and machine learning

  • Pablo Quijano Velasco,
  • Kedar Hippalgaonkar and
  • Balamurugan Ramalingam

Beilstein J. Org. Chem. 2025, 21, 10–38, doi:10.3762/bjoc.21.3

Graphical Abstract
  • four-step process involves allylation, Claisen rearrangement, isomerization, and oxidative dimerization. Each reaction step was optimized independently by using either online HPLC or in-line benchtop NMR spectroscopy to afford an overall yield of 67% in 66 iterative experiments over four linear
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Published 06 Jan 2025

Non-covalent organocatalyzed enantioselective cyclization reactions of α,β-unsaturated imines

  • Sergio Torres-Oya and
  • Mercedes Zurro

Beilstein J. Org. Chem. 2024, 20, 3221–3255, doi:10.3762/bjoc.20.268

Graphical Abstract
  • acid activates both the enol form of the azlactone and the α,β-unsaturated imine, facilitating the asymmetric [4 + 2] cyclization reaction. The authors proposed the formation of intermediate B which subsequently undergoes an isomerization to give the chiral dihydropyridinone derivative 49. An
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Published 10 Dec 2024

Synthesis of 2H-azirine-2,2-dicarboxylic acids and their derivatives

  • Anastasiya V. Agafonova,
  • Mikhail S. Novikov and
  • Alexander F. Khlebnikov

Beilstein J. Org. Chem. 2024, 20, 3191–3197, doi:10.3762/bjoc.20.264

Graphical Abstract
  • their amides, esters, and azides by FeCl2-catalyzed isomerization of 3-aryl-5-chloroisoxazole-4-carbonyl chlorides into 3-aryl-2H-azirine-2,2-dicarbonyl dichlorides followed by their reaction with nucleophiles are reported. Two approaches to the preparation of 3-aryl-5-chloroisoxazole-4-carbonyl
  • chlorides have been developed. Keywords: azirine-2,2-dicarboxamides; azirine-2,2-dicarboxylic acids; isomerization; isoxazoles; Introduction The isomerization of isoxazoles, containing a heteroatomic substituent at C5, to 2H-azirines is a powerful method for the preparation of 2H-azirine-2-carboxylic acid
  • derivatives [1]. In particular, the catalytic isomerization of 5-chloroisoxazoles allows the generation of azirine-2-carbonyl chlorides, which can be easily converted into a variety of azirine-2-carboxylic acid derivatives by reactions with nucleophilic reagents. Using this approach, numerous 2-(1H-pyrazol-1
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Published 05 Dec 2024

Synthesis of extended fluorinated tripeptides based on the tetrahydropyridazine scaffold

  • Thierry Milcent,
  • Pascal Retailleau,
  • Benoit Crousse and
  • Sandrine Ongeri

Beilstein J. Org. Chem. 2024, 20, 3174–3181, doi:10.3762/bjoc.20.262

Graphical Abstract
  • hydrazine [36], allowed the expected compounds 6e and 6f to be obtained in good yields. This methodology was applied to the previous hydrazides 5a–d giving the corresponding compounds 6a–d in similar yields. As expected, no isomerization occurred during the oxidation, leading exclusively to the imine and
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Published 04 Dec 2024

Enantioselective regiospecific addition of propargyltrichlorosilane to aldehydes catalyzed by biisoquinoline N,N’-dioxide

  • Noble Brako,
  • Sreerag Moorkkannur Narayanan,
  • Amber Burns,
  • Layla Auter,
  • Valentino Cesiliano,
  • Rajeev Prabhakar and
  • Norito Takenaka

Beilstein J. Org. Chem. 2024, 20, 3069–3076, doi:10.3762/bjoc.20.255

Graphical Abstract
  • % yield with 61:39–92:8 enantiomeric ratios. Furthermore, possible mechanisms of propargyl–allenyl isomerization of propargyltrichlorosilane were computationally investigated. Keywords: α-allenic alcohol; computational chemistry; Lewis base catalysis; organocatalysis; propargyltrichlorosilane
  • significantly suppressed the isomerization [46]. In this study, however, we could not prepare isomerically pure propargyltrichlorosilane on a preparative scale from propargyl chloride and CuCl by following Kobayashi’s protocol [45] (propargyltrichlorosilane/allenyltrichlorosilane = 10:1) while we fully
  • inherently present in chlorosilane reagents. Given our observation regarding propargyl–allenyl isomerization as discussed above, we wanted to avoid its use. Thus, we briefly tested whether 1) it is necessary for achieving a reasonable reaction rate, and 2) if it could be substituted with 4 Å molecular sieves
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Published 25 Nov 2024

Extension of the π-system of monoaryl-substituted norbornadienes with acetylene bridges: influence on the photochemical conversion and storage of light energy

  • Robin Schulte,
  • Dustin Schade,
  • Thomas Paululat,
  • Till J. B. Zähringer,
  • Christoph Kerzig and
  • Heiko Ihmels

Beilstein J. Org. Chem. 2024, 20, 3061–3068, doi:10.3762/bjoc.20.254

Graphical Abstract
  • )2 and the corresponding arylnorbornadienes without an acetylene bridge, such as 1o, leading to efficient and quantitative conversion to the quadricylanes (Scheme 4) [38]. Hence, we assumed that triplet-sensitized isomerization of the mono-, bis-, and tris-norbornadiene derivatives with an
  • by 1H NMR spectroscopy. Initially, all derivatives showed the isomerization reactions to the corresponding quadricyclane derivatives, as identified by the characteristic 1H NMR signal pattern of the quadricyclane fragment with five multiplets at around 1.6 ppm, 1.7 ppm, 1.8 ppm, 2.1 ppm, and 2.2 ppm
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Published 21 Nov 2024
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  • (Figure 5A) [56]. In the structure, α-CD was located on the trans-azobenzene moiety before ultraviolet (UV) irradiation, after which it moved to the methylene moiety based on the cis-isomerization of the azobenzene by UV irradiation. After the azobenzene moiety was moved back to the trans-isomer via
  • α-CD-based rotaxane comprising a stilbene axle that was synthesized by the Suzuki coupling reaction to light irradiation (Figure 6, right) [58]. In this structure, α-CD was first located on the trans-stilbene moiety, after which it moved to the benzene ring moiety via the cis-isomerization of the
  • stilbene framework by 335 nm light irradiation before returning to the stilbene moiety via trans-isomerization induced by the 280 nm light irradiation; this system is also reversible. The change in the local position of CD is significantly reflected in the ICD behavior of this system. Kodaka and co-workers
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Published 19 Nov 2024

N-Glycosides of indigo, indirubin, and isoindigo: blue, red, and yellow sugars and their cancerostatic activity

  • Peter Langer

Beilstein J. Org. Chem. 2024, 20, 2840–2869, doi:10.3762/bjoc.20.240

Graphical Abstract
  • in case of the oxoindirubins 41 seems to decrease this unfavorable dipol situation in case of the E-configured isomers. It is likely, that an E/Z isomerization takes place under acidic conditions. The barrier of this equilibrium is most likely lowered by the presence of the ring oxygen as it
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Published 08 Nov 2024

Copper-catalyzed yne-allylic substitutions: concept and recent developments

  • Shuang Yang and
  • Xinqiang Fang

Beilstein J. Org. Chem. 2024, 20, 2739–2775, doi:10.3762/bjoc.20.232

Graphical Abstract
  • formal [4 + 1] and [4 + 2] cyclizations were carried out through substitution by an alkynyl copper-driven dearomatization/rearomatization/cyclization/isomerization process (Scheme 40). Li, Yu and Liu et al. [78] achieved the asymmetric catalyzed dearomative [4 + 1] spiroannulation of nonfunctionalized 1
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Published 31 Oct 2024

Natural resorcylic lactones derived from alternariol

  • Joachim Podlech

Beilstein J. Org. Chem. 2024, 20, 2171–2207, doi:10.3762/bjoc.20.187

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Published 30 Aug 2024

Efficacy of radical reactions of isocyanides with heteroatom radicals in organic synthesis

  • Akiya Ogawa and
  • Yuki Yamamoto

Beilstein J. Org. Chem. 2024, 20, 2114–2128, doi:10.3762/bjoc.20.182

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  • lack of geometrical isomerization of the C–N double bond of the dithiolation products [32]. The thioselenation product 6’, an imine derivative, can be converted to a β-lactam derivative by [2 + 2] cycloaddition with ketene generated in situ. For example, thioselenation of RNC (R = (EtO)2P(O)–CH2) gave
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Perspective
Published 26 Aug 2024

Understanding X-ray-induced isomerisation in photoswitchable surfactant assemblies

  • Beatrice E. Jones,
  • Camille Blayo,
  • Jake L. Greenfield,
  • Matthew J. Fuchter,
  • Nathan Cowieson and
  • Rachel C. Evans

Beilstein J. Org. Chem. 2024, 20, 2005–2015, doi:10.3762/bjoc.20.176

Graphical Abstract
  • molecules to create photosurfactants (PS), whose molecular shape and polarity can be modified using light [4][5][6]. Of the PS studied, most use an azobenzene (Azo) photoswitch that undergoes trans-to-cis (E-to-Z) isomerization on irradiation with UV light, typically forming a photostationary state (PSS
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Published 14 Aug 2024

Harnessing the versatility of hydrazones through electrosynthetic oxidative transformations

  • Aurélie Claraz

Beilstein J. Org. Chem. 2024, 20, 1988–2004, doi:10.3762/bjoc.20.175

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  • perchlorate as electrolyte. It is interesting to notice that the isomerization of the product and subsequent ring closure discussed above (see Scheme 17) did not occur under these conditions (Scheme 24) [73]. In 2023, Hajra et al. provided an electrochemical method for the C(sp2)–H sulfonylation of aromatic
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Published 14 Aug 2024

1,2-Difluoroethylene (HFO-1132): synthesis and chemistry

  • Liubov V. Sokolenko,
  • Taras M. Sokolenko and
  • Yurii L. Yagupolskii

Beilstein J. Org. Chem. 2024, 20, 1955–1966, doi:10.3762/bjoc.20.171

Graphical Abstract
  • ], respectively, while reference [68] provides UV-spectral data of both isomers. 1H, 19F, and 13C NMR data [69][70] are given in Table 2. Chemistry of HFO-1132 Isomerization Iodine-catalyzed cis–trans isomerization of 1,2-difluoroethylene and corresponding equilibrium measurements were described in the 1960s [47
  • ]. Along with this, photoisomerization is described in patent literature [71][72][73][74]. It was shown that the experimentally observed enthalpy of isomerization (0.928 kcal/mol [47]) is in agreement with the calculated difference in the total energy of the two isomers (0.959 kcal/mol [65][75]). Cis-1,2
  • required 2–3 weeks at the same temperature. In this case, sufficient E–Z isomerization of the starting olefin occurred during the reaction, and the major product was 5,6-endo,endo-difluoro-1,2,3,4,7,7-hexachlorobicyclo[2.2.1]-2-heptene, which was formed from (Z)-1,2-difluoroethylene (Scheme 20). Both
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Published 12 Aug 2024

The Groebke–Blackburn–Bienaymé reaction in its maturity: innovation and improvements since its 21st birthday (2019–2023)

  • Cristina Martini,
  • Muhammad Idham Darussalam Mardjan and
  • Andrea Basso

Beilstein J. Org. Chem. 2024, 20, 1839–1879, doi:10.3762/bjoc.20.162

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Published 01 Aug 2024

A fiber-optic spectroscopic setup for isomerization quantum yield determination

  • Anouk Volker,
  • Jorn D. Steen and
  • Stefano Crespi

Beilstein J. Org. Chem. 2024, 20, 1684–1692, doi:10.3762/bjoc.20.150

Graphical Abstract
  • setup for isomerization quantum yield determination is reported. The setup combines fiber-coupled LEDs, a commercially calibrated thermopile detector for measurement of the photon flux, and a fiber-coupled UV–vis spectrometer. By solving the rate equations numerically, isomerization quantum yields can
  • actinometry, thus demonstrating the reliability of our setup. Keywords: isomerization; molecular photoswitches; photochemistry; photon flux; UV–vis spectroscopy; Introduction Photoswitches are molecules that can undergo a light-driven structural rearrangement to populate a metastable state of the initial
  • reactant. This isomerization can be reversed by light of a different wavelength or thermal stimuli. Depending on the nature of the reactant, different classes of photoreactions can be utilized: double bond isomerizations, electrocyclization, cycloadditions, and electron-, hydrogen-, or group transfer [1
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Published 22 Jul 2024
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