Synthesis of fluorinated acid-functionalized, electron-rich nickel porphyrins

• Mike Brockmann,
• Jonas Lobbel,
• Lara Unterriker and
• Rainer Herges

Beilstein J. Org. Chem. 2024, 20, 2954–2958, doi:10.3762/bjoc.20.248

• -substituted Ni porphyrins 29 (78%), 30 (97%), and 31 (57%). The latter were treated with LiOH and HCl to give the free acids 32 (94%), 33 (39%), and 34 (45%). The HPLC–ESIMS analysis of 32, 33, and 34 revealed that two major atropisomers of each porphyrin had formed. In 32 both atropisomers exhibit a roughly

C–C Coupling in sterically demanding porphyrin environments

• Liam Cribbin,
• Brendan Twamley,
• Nicolae Buga,
• John E. O’ Brien,
• Raphael Bühler,
• Roland A. Fischer and
• Mathias O. Senge

Beilstein J. Org. Chem. 2024, 20, 2784–2798, doi:10.3762/bjoc.20.234

• explored, or further changes in the pH of the solution. Enrichment to the αβαβ-atropisomer may also be favorable [50], as to alleviate the steric hindrance caused by the short distances (4.3–4.4 Å) between bromines in the α2β2-atropisomers (cf., Figure 5). Borylation and further coupling of

• previously, enrichment to the αβαβ, isomer may be necessary to remove the impact of opposing bromine atoms on the coupling reaction. Separation of the four individual atropisomers (αβαβ, α2β2, α3β, α4) has been accomplished before in dodecasubstituted porphyrins through Ni(II) metalation [15]. The core

• metalation effect prevents inner core N–H tautomerism [64] and thus increases the structural symmetry of the macrocycle [65][66], leading to more facile atropisomeric separation. However, in the case of compound 11 the atropisomers could not be separated due to low rotational barriers and similar polarities

Copper-catalyzed yne-allylic substitutions: concept and recent developments

• Shuang Yang and
• Xinqiang Fang

Beilstein J. Org. Chem. 2024, 20, 2739–2775, doi:10.3762/bjoc.20.232

• . Through control experiment, they have proposed a reaction mechanism where the formation of copper vinyl allenylidene and Conia-ene reaction are pivotal steps in the process (Scheme 48). Crafting atropisomers, particularly for those with 1,2-diaxes, poses a formidable task owing to the intricate interplay

Computation-guided scaffold exploration of 2E,6E-1,10-trans/cis-eunicellanes

• Zining Li,
• Sana Jindani,
• Volga Kojasoy,
• Teresa Ortega,
• Erin M. Marshall,
• Khalil A. Abboud,
• Sandra Loesgen,
• Dean J. Tantillo and
• Jeffrey D. Rudolf

Beilstein J. Org. Chem. 2024, 20, 1320–1326, doi:10.3762/bjoc.20.115

• easily undergoes Cope rearrangement at 90 °C to generate the stereospecific 6/6-bicyclic product 10 in 96% yield (Figure 3A) [10]. This Cope rearrangement product was found as two inseparable atropisomers (10a/10b) at room temperature, which coalesced into a single conformer at 130 °C [10]. We

• identified what appeared to be an oxy-Cope product (13a/13b), which would logically originate from a 5-hydroxyalbireticulene analog (11, Figure 3A). Because this product was isolated directly from the producing bacterium as inseparable atropisomers (i.e., no heat was applied), we speculated that a lower

• ]. In regard to the atropisomerism of 10a/10b, the two atropisomers are approximately equivalent in energy (0.5 kcal mol−1 difference) and require at least 17.4 kcal mol−1 to undergo conversion (Figure 3C). Interestingly, rotation in different directions requires barriers that differ by 2 kcal mol−1

Perspectives on push–pull chromophores derived from click-type [2 + 2] cycloaddition–retroelectrocyclization reactions of electron-rich alkynes and electron-deficient alkenes

• Michio Yamada

Beilstein J. Org. Chem. 2024, 20, 125–154, doi:10.3762/bjoc.20.13

• determined the absolute configurations of these atropisomers through the X-ray crystallographic analyses of (Sa)-59 and (Ra)-60. Surprisingly, heating the enantiomers of 69 and 60 at 80 °C for 3 h resulted in negligible thermally induced racemization. Meanwhile, in O2-free toluene solution under illumination

Unexpected chiral vicinal tetrasubstituted diamines via borylcopper-mediated homocoupling of isatin imines

• Marco Manenti,
• Leonardo Lo Presti,
• Giorgio Molteni and
• Alessandra Silvani

Beilstein J. Org. Chem. 2022, 18, 303–308, doi:10.3762/bjoc.18.34

• diffraction analysis and proved to be single diastereoisomers and atropisomers. A plausible mechanism for the one-pot Cu(II)-catalyzed Bpin addition to the isatin-derived ketimine substrate and subsequent homocoupling is described. Keywords: atropoisomer; bis(pinacolato)diboron; 3,3′-bisoxindole; N-tert

Peptide stapling by late-stage Suzuki–Miyaura cross-coupling

• Hendrik Gruß,
• Rebecca C. Feiner,
• Ridhiwan Mseya,
• David C. Schröder,
• Michał Jewgiński,
• Kristian M. Müller,
• Rafał Latajka,
• Antoine Marion and
• Norbert Sewald

Beilstein J. Org. Chem. 2022, 18, 1–12, doi:10.3762/bjoc.18.1

• diastereomers, i.e. cis/trans isomers or conformers with a high interconversion barrier. For complestatin-based macrocyclic peptides, the existence of biaryl atropisomers caused by the indole of tryptophan has been reported [82]. Recently, the occurrence of isomers was also observed in our group for SMC

• cyclised RGD peptides. It could be proven that an isomerisation is not caused by the cross-coupling but by the presence of stable isomers/conformers. Molecular dynamics (MD) simulations verified the appearance of stable, distinct conformers or atropisomers, which were in accordance with the experimental

Recent advances in the asymmetric phosphoric acid-catalyzed synthesis of axially chiral compounds

• Alemayehu Gashaw Woldegiorgis and
• Xufeng Lin

Beilstein J. Org. Chem. 2021, 17, 2729–2764, doi:10.3762/bjoc.17.185

• (Brønsted acidity/basicity, hydrogen-bonding units, and counter-anions toward metals) [48][49]. In 2019, Shi, Lin, and co-workers achieved an enantioselective synthesis of axially chiral quinoline-derived biaryl atropisomers via Pd-catalyzed C–H olefination of 8-phenylquinoline (11) using a novel chiral

• of axially chiral N-arylindole atropisomers from azonaphthalene 54 and indole substrates 59 in the presence of chiral phosphoric acid CPA 17. The atropisomeric adducts were obtained in moderate to good yields (up to 93%) with good to excellent enantioselectivity (up to >99% ee, Scheme 20b). Therefore

• restricted rotation around an N–C single bond. There are few strategies for the catalytic atroposelective construction of N–C nonbiaryl atropisomers, which mainly consist of enantioselective cyclization [35], N-functionalization [93], and desymmetrization [94] of the existing achiral N–C bond. In this

A cyclopeptide and three oligomycin-class polyketides produced by an underexplored actinomycete of the genus Pseudosporangium

• Shun Saito,
• Kota Atsumi,
• Tao Zhou,
• Keisuke Fukaya,
• Daisuke Urabe,
• Naoya Oku,
• Md. Rokon Ul Karim,
• Hisayuki Komaki and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2020, 16, 1100–1110, doi:10.3762/bjoc.16.97

• comparison of experimental and simulated ECD spectra [26][27]. Quite interestingly, the DFT calculation suggested that 1a and 1b would possess the opposite axial chirality around the biaryl bond between C-6 and C-7'': Ra for 1a and Sa for 1b as dominant atropisomers (Figure 4). This conformational difference

Arylisoquinoline-derived organoboron dyes with a triaryl skeleton show dual fluorescence

• Vânia F. Pais,
• Tristan Neumann,
• Ignacio Vayá,
• M. Consuelo Jiménez,
• Abel Ros and
• Uwe Pischel

Beilstein J. Org. Chem. 2019, 15, 2612–2622, doi:10.3762/bjoc.15.254

• the syn and anti atropisomers because of the slow rotation around the chiral axis at this temperature. Free rotation around the C–C bond was observed at 80 °C and hence, variable-temperature 1H NMR studies showed coalescence of the signals to give an average spectrum (see Supporting Information File 1

• (toluene/EtOAc 7:1), 16 was obtained as a light-yellow foam (70 mg, 62% yield). NMR spectra recorded at 25 °C showed a ca. 0.45:0.55 diastereomeric mixture of atropisomers. To simplify the spectra the measurements were undertaken at 80 °C. 1H NMR (400 MHz, C6D6, 80 °C) δ 8.80 (d, J = 5.6 Hz, 0.5H), 8.78 (d

• borylation starting from 13 (95 mg, 0.25 mmol) and after flash chromatography on silica gel (n-hexane/EtOAc 4:1), 17 was obtained as light-yellow foam (105 mg, 83% yield). NMR spectra recorded at 25 °C showed a ca. 0.45:0.55 diastereomeric mixture of atropisomers. To simplify the spectra the measurements

Self-assembled coordination thioether silver(I) macrocyclic complexes for homogeneous catalysis

• Zhen Cao,
• Aline Lacoudre,
• Cybille Rossy and
• Brigitte Bibal

Beilstein J. Org. Chem. 2019, 15, 2465–2472, doi:10.3762/bjoc.15.239

• bis-alkylaryl thioether ligand to control the directionality and spatial orientation of its coordination to silver(I). Besides, 9,10-diphenylanthracenes (DPA) with ortho-substituted 9- and 10-aryl groups can exist as syn- or anti-atropisomers whose rotational barrier [46][47] ranges from 21 (ortho-H

• ) to 25–29 kcal/mol (ortho-CH3). A few ortho-substituted DPA atropisomers have been described as potent molecular switches [48][49], building-blocks for self-assembled capsules [50][51] or optical materials [52][53][54]. However, due to their partially frozen structure, syn-isomers of DPA are ideal

Catalytic asymmetric oxo-Diels–Alder reactions with chiral atropisomeric biphenyl diols

• Chi-Tung Yeung,
• Wesley Ting Kwok Chan,
• Wai-Sum Lo,
• Ga-Lai Law and
• Wing-Tak Wong

Beilstein J. Org. Chem. 2019, 15, 955–962, doi:10.3762/bjoc.15.92

• highest reactivity and enantioselectivity with trimethylacetaldehyde as a substrate. Opposite absolute configurations of the catalytic products of benzaldehyde from atropisomers of 5 showed that axial chirality contributes significantly to high enantioselectivities. Further works on organocatalyst

Some mechanistic aspects regarding the Suzuki–Miyaura reaction between selected ortho-substituted phenylboronic acids and 3,4,5-tribromo-2,6-dimethylpyridine

• Piotr Pomarański,
• Piotr Roszkowski,
• Jan K. Maurin,
• Armand Budzianowski and
• Zbigniew Czarnocki

Beilstein J. Org. Chem. 2018, 14, 2384–2393, doi:10.3762/bjoc.14.214

• , Poland 10.3762/bjoc.14.214 Abstract Background: Atropisomers are very interesting stereoisomers having axial chirality resulting from restricted rotation around single bonds and are found in various classes of compounds. ortho-Substituted arylpyridines are an important group of them. A regio- and

• conclusions about the order of substitution. Also, the observed selectivity in the case of ortho-methoxyphenylboronic acid suggested an additional metal O-chelation effect in the transition state, apparently not present in the ortho-chloro analogues. The rotational barrier in selected atropisomers was

• determined on the basis of HT NMR and thermal epimerisation experiments. The structure of most presented atropisomeric derivatives of 2,6-dimethylpyridine was confirmed by single-crystal X-ray analysis. Racemic chiral, differently substituted atropisomers were also examined by 1H NMR spectroscopy in the

Conjugate addition–enantioselective protonation reactions

• James P. Phelan and
• Jonathan A. Ellman

Beilstein J. Org. Chem. 2016, 12, 1203–1228, doi:10.3762/bjoc.12.116

• er) (Scheme 23b) [46]. This enantioselective addition process could be applied to a racemic mixture of axially chiral N-(2-tert-butylphenyl)itaconimide (98), furnishing atropisomers 99a and 99b as a stable and separable 1:1 mixture. A higher enantioselectivity was observed for the anti-diastereomer

A convenient route to symmetrically and unsymmetrically substituted 3,5-diaryl-2,4,6-trimethylpyridines via Suzuki–Miyaura cross-coupling reaction

• Dariusz Błachut,
• Joanna Szawkało and
• Zbigniew Czarnocki

Beilstein J. Org. Chem. 2016, 12, 835–845, doi:10.3762/bjoc.12.82

• the phenyl rings (or naphthalene ring for 26) with three methyl groups of the pyridine ring. Consequently, the inhibited rotation of the phenyl rings led to the formation of stable diastereomeric atropisomers which could be detected in NMR spectroscopy. The interconversion barrier is probably

• remarkably high in 3,5-bis(2-trifluromethylphenyl)-2,4,6-trimethylpyridine [79], since both atropisomers of this compound could be observed during GC–MS analysis as a pair of well-separated Gaussian peaks at the temperature of elution approaching 290 °C. A similar phenomenon was observed for pyridine 8 and

• efficient techniques (preparative HPLC). The library of synthesized compounds will be used as a reference standard during our study on impurity markers in illegally produced amphetamine analogues. In several cases of ortho-aryl-substituted pyridines, stable atropisomers were observed and this phenomenon

Organocatalytic asymmetric Henry reaction of 1H-pyrrole-2,3-diones with bifunctional amine-thiourea catalysts bearing multiple hydrogen-bond donors

• Ming-Liang Zhang,
• Deng-Feng Yue,
• Zhen-Hua Wang,
• Yuan Luo,
• Xiao-Ying Xu,
• Xiao-Mei Zhang and
• Wei-Cheng Yuan

Beilstein J. Org. Chem. 2016, 12, 295–300, doi:10.3762/bjoc.12.31

• and position of the substituents on the phenyl ring (Table 3, entries 3–10). When the substituent was in the ortho-position of the phenyl ring of the R2 group, a diastereoselectivity was observed that may be due to the steric hindrance of ortho substituents led to the atropisomers (Table 3, entry 3

Chemistry of polyhalogenated nitrobutadienes, 14: Efficient synthesis of functionalized (Z)-2-allylidenethiazolidin-4-ones

• Viktor A. Zapol’skii,
• Jan C. Namyslo,
• Mimoza Gjikaj and
• Dieter E. Kaufmann

Beilstein J. Org. Chem. 2014, 10, 1638–1644, doi:10.3762/bjoc.10.170

• for their application in optoelectronics. Keywords: atropisomers; cyclization; 2-nitroperchlorobutadiene; 1H-pyrazoles; thiazolidin-4-ones; Introduction Preliminary studies in the field of polyhalogenated nitrobutadienes have already shown the enormous potential of pentachloro-2-nitro-1,3-butadiene

• -substituted anilines 16–18 two atropisomers were generated. This phenomenon is due to a less hindered rotation of the C–N bond of the former anilines (Figure 1). The steric hindrance is additionally forcing by the s-cis conformation of the nitrobutadiene moiety (cf. Figure 2). A DFT calculation of the energy

• thiazolidinone atropisomers, due to hindered rotation between the trichlorovinyl and the arylamino groups. X-ray analysis proved the Z-configuration of the nitrovinylidene group of 11. Subsequent reactions of the thiazolidinones, such as the SNVin thiolation in 2-position of the allylidene backbone, Knoevenagel

Isocyanide-based multicomponent reactions towards cyclic constrained peptidomimetics

• Gijs Koopmanschap,
• Eelco Ruijter and
• Romano V.A. Orru

Beilstein J. Org. Chem. 2014, 10, 544–598, doi:10.3762/bjoc.10.50

On the control of secondary carbanion structure utilising ligand effects during directed metallation

• Andrew E. H. Wheatley,
• Jonathan Clayden,
• Ian H. Hillier,
• Alison Campbell Smith,
• Mark A. Vincent,
• Laurence J. Taylor and
• Joanna Haywood

Beilstein J. Org. Chem. 2012, 8, 50–60, doi:10.3762/bjoc.8.5

• single ortho substituent [25]. At ambient temperature, amides with this substitution pattern are conformationally mobile about their aryl–CO bond [26] on a timescale of seconds or less, and hence, inseparable into atropisomers [27]. However, at the temperatures commonly used to effect lithiation

• reactions, they should exist as chiral, racemic atropisomers. The stepwise lateral ethylation/ortho methylation of 3-H and lateral methylation/ortho methylation of 6-H [17] prior to warming returned conformationally rigid but oppositely configured amides with diastereomeric ratios >9:1; establishing that

Carbamate-directed benzylic lithiation for the diastereo- and enantioselective synthesis of diaryl ether atropisomers

• Abigail Page and
• Jonathan Clayden

Beilstein J. Org. Chem. 2011, 7, 1327–1333, doi:10.3762/bjoc.7.156

• for the synthesis of “nonstandard” atropisomer structures containing rigid fragments joined by a hindered single bond, but which are different from the typically well-studied biaryl compounds [4][5]. These non-biaryl atropisomers have included aromatic amides [6][7][8], ureas [9], ethers [10][11][12

• rotation [19]. Several of the classes of atropisomers we have studied contain functional groups which are excellent directors of lithiation [20], and indeed our original interest in lithiation stemmed from the need to build these atropisomeric structures rapidly and efficiently [21]. We recently reported

• obtained, suggested that they are insufficiently hindered to exist as stable atropisomers and they interconvert on a relatively short timescale, of seconds to minutes, at room temperature. In order to enhance the ease of metallation of the substrates (6 gives low yield at −78 °C unless sparteine is present

Synthesis of 5-(2-methoxy-1-naphthyl)- and 5-[2-(methoxymethyl)-1-naphthyl]-11H-benzo[b]fluorene as 2,2'-disubstituted 1,1'-binaphthyls via benzannulated enyne–allenes

• Yu-Hsuan Wang,
• Joshua F. Bailey,
• Jeffrey L. Petersen and
• Kung K. Wang

Beilstein J. Org. Chem. 2011, 7, 496–502, doi:10.3762/bjoc.7.58

• sensitive to the steric requirement of the substituent at the alkynyl terminus. The benzannulated enediyne 1b with a sterically demanding 2,6-dibromophenyl substituent was also smoothly converted to 3b [6]. With 1c having a 1,1'-binaphthyl substituent, a 1:1 mixture of the syn and the anti atropisomers of

Molecular recognition of organic ammonium ions in solution using synthetic receptors

• Andreas Späth and
• Burkhard König

Beilstein J. Org. Chem. 2010, 6, No. 32, doi:10.3762/bjoc.6.32

Asymmetric synthesis of biaryl atropisomers by dynamic resolution on condensation of biaryl aldehydes with (−)-ephedrine or a proline- derived diamine

• Ann Bracegirdle,
• Jonathan Clayden and
• Lai Wah Lai

Beilstein J. Org. Chem. 2008, 4, No. 47, doi:10.3762/bjoc.4.47

• ][8][9]. In view of the thermal instability inherent in a stereogenic bond (rather than a centre) dynamic methods appear particularly suited to the stereoselective synthesis of atropisomers [10][11]. In connection with our work on non-biaryl atropisomers such as amides [12][13][14][15][16], ethers [17