Beyond symmetric self-assembly and effective molarity: unlocking functional enzyme mimics with robust organic cages

• Keith G. Andrews

Beilstein J. Org. Chem. 2025, 21, 421–443, doi:10.3762/bjoc.21.30

• methods in materials discovery are unlikely to discover solution-phase sensors or catalysts without a rational starting point to build from. Instead, new receptors [413] and catalysts [414][415][416] will likely arise from improvements in computational rationalization of experimental data [415][417

Emerging trends in the optimization of organic synthesis through high-throughput tools and machine learning

• Pablo Quijano Velasco,
• Kedar Hippalgaonkar and
• Balamurugan Ramalingam

Beilstein J. Org. Chem. 2025, 21, 10–38, doi:10.3762/bjoc.21.3

• , each comprising 650 µL within a slug flow reactor [48]. This innovative system features precise monitoring of the reaction slug through a dedicated array of phase sensors and an algorithm designed for detecting its passage. As a result, the workflow delivers a notable boost in productivity, surpassing

Efficient synthesis of fluorinated triphenylenes with enhanced arene–perfluoroarene interactions in columnar mesophases

• Yang Chen,
• Jiao He,
• Hang Lin,
• Hai-Feng Wang,
• Ping Hu,
• Bi-Qin Wang,
• Ke-Qing Zhao and
• Bertrand Donnio

Beilstein J. Org. Chem. 2024, 20, 3263–3273, doi:10.3762/bjoc.20.270

• tuneability of the optical and electronic properties, which can potentially be exploited for advanced applications in display technologies, photonic devices, sensors, and organic electronics. We recently successfully reported the straightforward synthesis of several mesogens containing four lateral aliphatic

Investigation of a bimetallic terbium(III)/copper(II) chemosensor for the detection of aqueous hydrogen sulfide

• Parvathy Mini,
• Michael R. Grace,
• Genevieve H. Dennison and
• Kellie L. Tuck

Beilstein J. Org. Chem. 2024, 20, 2818–2826, doi:10.3762/bjoc.20.237

• Parvathy Mini Michael R. Grace Genevieve H. Dennison Kellie L. Tuck School of Chemistry, Monash University, Clayton, Victoria 3800, Australia CBRN Defence, Sensors and Effectors Division, Defence Science and Technology Group, Edinburgh, SA, 5111, and Fishermans Bend, VIC, 3207, Australia 10.3762

• − in the aqueous state at a pH of 7.4 due to its weak acidic nature and high solubility in water (80 mM at 37 °C) [6]. Elevated levels of H2S in groundwater pose high risks to both human health and aquatic ecosystems [7], compelling rigorous monitoring of water sources. Even though sensors for

• fluorescent-based sensors; notable features include large Stokes shifts, extended luminescent lifetimes, and precisely defined emission bands [15]. Typically lasting in the order of milliseconds, their extended luminescent lifetimes enable the implementation of time-gated detection methods, effectively

Efficient modification of peroxydisulfate oxidation reactions of nitrogen-containing heterocycles 6-methyluracil and pyridine

• Alfiya R. Gimadieva,
• Yuliya Z. Khazimullina,
• Aigiza A. Gilimkhanova and
• Akhat G. Mustafin

Beilstein J. Org. Chem. 2024, 20, 2599–2607, doi:10.3762/bjoc.20.219

• classes. Experimental 1H and 13C NMR spectra were recorded on a Bruker Avance III 500 MHz spectrometer at 500.13 MHz (1H) and 125.73 MHz (13C) with 5 mm QNP sensors at a constant sample temperature of 298 K. The solvents were DMSO-d6, D2O, CDCl3 and the internal standard was SiMe4. Chemical shifts in the

Synthesis and reactivity of the di(9-anthryl)methyl radical

• Tomohiko Nishiuchi,
• Kazuma Takahashi,
• Yuta Makihara and
• Takashi Kubo

Beilstein J. Org. Chem. 2024, 20, 2254–2260, doi:10.3762/bjoc.20.193

• state yields the monomer radical [16][17][18]. Therefore, aromatic hydrocarbon radicals with Ant units possess both stability and reactivity depending on the conditions, giving them high potential for use as reactive catalysts [22][23] and stimuli-responsive sensors [24][25]. To further investigate this

A new platform for the synthesis of diketopyrrolopyrrole derivatives via nucleophilic aromatic substitution reactions

• Vitor A. S. Almodovar and
• Augusto C. Tomé

Beilstein J. Org. Chem. 2024, 20, 1933–1939, doi:10.3762/bjoc.20.169

• fluorescence quantum yields, ranging from 0.66 to 0.83, confirming their potential applications in fluorescence imaging, sensors, and optoelectronic devices. A comprehensive discussion of the potential uses of these fluorescent substances in areas such as materials science, biology, or chemistry may provide a

Activity assays of NnlA homologs suggest the natural product N-nitroglycine is degraded by diverse bacteria

• Kara A. Strickland,
• Brenda Martinez Rodriguez,
• Ashley A. Holland,
• Shelby Wagner,
• Michelle Luna-Alva,
• David E. Graham and
• Jonathan D. Caranto

Beilstein J. Org. Chem. 2024, 20, 830–840, doi:10.3762/bjoc.20.75

• (Scheme 1) [20][21]. Vs NnlA contains a Per-Arnt-Sim (PAS) domain – protein domains that often bind heme and function as gas or redox sensors [20]. Indeed, Vs NnlA was shown to contain a heme cofactor [21]. Mutagenesis of a predicted histidine ligand to this heme resulted in loss of the heme and the

Methodology for awakening the potential secondary metabolic capacity in actinomycetes

• Shun Saito and
• Midori A. Arai

Beilstein J. Org. Chem. 2024, 20, 753–766, doi:10.3762/bjoc.20.69

• is regulated by such heat shock sensors. Although long-term high-temperature culture experiments are employed in this study, reactive oxygen species (ROS) may exert a stronger effect than high temperature. In actinomycetes, several sensor proteins for ROS have been reported (e.g., SoxR and OxyR

Possible bi-stable structures of pyrenebutanoic acid-linked protein molecules adsorbed on graphene: theoretical study

• Yasuhiro Oishi,
• Motoharu Kitatani and
• Koichi Kusakabe

Beilstein J. Org. Chem. 2024, 20, 570–577, doi:10.3762/bjoc.20.49

• graphene. We discuss the expected protein sensors when this type of energy surface appears and provide a guideline for improving the sensitivity, especially as an oscillator-type biosensor. Keywords: biosensor; DFT; PASE; protein; surface adsorption; Introduction Consideration of the atomic-scale motion

• can be expected for proteins immobilized on graphene. As a result, we propose a strategy for improving the accuracy of the sensing process in elastic wave measurement sensors through antigen/antibody reactions. Results and Discussion PASE and PASE-derivatives on graphene Among pyrene derivatives, PASE

• ]. Various biosensors have already been developed, many of which require immobilization of antibody proteins on graphene surface. Therefore, protein capture by linkers is used in a relatively large number of sensors. In the elastic wave measurement system, elastic waves are generated by laser irradiation and

Synthesis of photo- and ionochromic N-acylated 2-(aminomethylene)benzo[b]thiophene-3(2Н)-ones with a terminal phenanthroline group

• Vladimir P. Rybalkin,
• Sofiya Yu. Zmeeva,
• Lidiya L. Popova,
• Irina V. Dubonosova,
• Olga Yu. Karlutova,
• Oleg P. Demidov,
• Alexander D. Dubonosov and
• Vladimir A. Bren

Beilstein J. Org. Chem. 2024, 20, 552–560, doi:10.3762/bjoc.20.47

• change depending on the intensity of sunlight), photochromic tags for biological research and optical sensors [15][16][17][18][19][20][21]. To develop new dual-mode molecular switches capable of efficient modulation of optical and fluorescent properties, both upon irradiation with visible light and upon

Switchable molecular tweezers: design and applications

• Pablo Msellem,
• Maksym Dekthiarenko,
• Nihal Hadj Seyd and
• Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

• direction since the beginning of the 21st century concomitantly with the growth of the field [11][18]. Because of their ability to respond to chemical stimuli, coordination-responsive switchable tweezers have the potential to be used in many applications including but not limited to supramolecular sensors

• fullerene complexation. Other halides (Br− and F−) also allowed C60 and C70 complexation while tetrabutylammonium cations inhibited the fullerenes' complexation by competing for the cavity of the calix [72]. These calixpyrrole-based tweezers provide a good example of ON/OFF molecular sensors for neutral

Photochromic derivatives of indigo: historical overview of development, challenges and applications

• Gökhan Kaplan,
• Zeynel Seferoğlu and
• Daria V. Berdnikova

Beilstein J. Org. Chem. 2024, 20, 228–242, doi:10.3762/bjoc.20.23

• soft materials. A possibility to apply photochromic mono-arylated indigo derivatives as water sensors with high sensitivity was demonstrated by Dube and co-workers in 2018 [66]. The detection principle relied on a remarkable acceleration (up to 300 times) of the thermal Z–E relaxation of compound 20b

Charge carrier transport in perylene-based and pyrene-based columnar liquid crystals

• Alessandro L. Alves,
• Simone V. Bernardino,
• Carlos H. Stadtlober,
• Edivandro Girotto,
• Giliandro Farias,
• Rodney M. do Nascimento,
• Sergio F. Curcio,
• Thiago Cazati,
• Marta E. R. Dotto,
• Juliana Eccher,
• Leonardo N. Furini,
• Hugo Gallardo,
• Harald Bock and
• Ivan H. Bechtold

Beilstein J. Org. Chem. 2023, 19, 1755–1765, doi:10.3762/bjoc.19.128

• ), organic light-emitting diodes (OLEDs) and sensors [1][2]. Columnar liquid crystals are attractive due to their solution processability and their self-organization in highly anisotropic supramolecular architectures, which favors the mainly one-dimensional migration of charge carriers with an anisotropy of

Trifluoromethylated hydrazones and acylhydrazones as potent nitrogen-containing fluorinated building blocks

• Zhang Dongxu

Beilstein J. Org. Chem. 2023, 19, 1741–1754, doi:10.3762/bjoc.19.127

• of several diseases [28][29][30]. They have also been applied in the field of materials science, especially for the synthesis of metal and covalent organic frameworks, dyes, hole-transporting materials and sensors, and in dynamic combinatorial chemistry [31], indicating a wide applicability

Unprecedented synthesis of a 14-membered hexaazamacrocycle

• Anastasia A. Fesenko and
• Anatoly D. Shutalev

Beilstein J. Org. Chem. 2023, 19, 1728–1740, doi:10.3762/bjoc.19.126

• agents for magnetic resonance imaging, radiopharmaceuticals, sensors, NMR shift reagents, luminescent materials, catalysis, etc. To date, a large variety of PAMs with various ring sizes, number and location of nitrogen atoms, levels of unsaturation, etc. have been prepared and studied. Nevertheless, the

Quinoxaline derivatives as attractive electron-transporting materials

• Zeeshan Abid,
• Liaqat Ali,
• Sughra Gulzar,
• Faiza Wahad,
• Raja Shahid Ashraf and
• Christian B. Nielsen

Beilstein J. Org. Chem. 2023, 19, 1694–1712, doi:10.3762/bjoc.19.124

• devices is discussed in detail. Additionally, their significance as thermally activated delayed fluorescence emitters and chromophores for OLEDs, sensors and electrochromic devices is explored. The review emphasizes the remarkable characteristics and versatility of quinoxaline derivatives in electron

• chromophores in the development of organic light-emitting diodes (OLEDs), sensors, and electrochromic devices [8][13][14]. In this review, we have comprehensively examined the recent advancements of Qx-derived ETMs in various applications within the organic semiconductor device field over the past five to six

• electronic characteristics. To enhance their performance in sensors and electrochromic devices, researchers have concentrated on manipulating their electron transport properties. By tailoring the strength of electron acceptors, fine-tuning the electronic nature of functional groups, incorporating additional

Tying a knot between crown ethers and porphyrins

• Maksym Matviyishyn and
• Bartosz Szyszko

Beilstein J. Org. Chem. 2023, 19, 1630–1650, doi:10.3762/bjoc.19.120

• the possible future directions. Keywords: crown ethers; porphyrinoids; self-assembly; sensors; supramolecular chemistry; Introduction Many areas of modern supramolecular chemistry, organic, inorganic, materials and coordination chemistry, are based upon macrocyclic compounds of specifically-designed

• porphyrins as multitopic receptors, sensors, and supramolecular hosts, with applications in ion transport, catalysis, and polymeric materials [22][40][41][42][43][44][45]. In 1984 Lehn, Sessler and co-workers developed double-side-strapped crowned porphyrins, which served as tritopic and tetratopic receptors

• ether systems, where the catechol unit of the crown ether was fused to two β-pyrrolic positions of the porphyrin periphery. The systems presented intriguing intramolecular electron-transfer properties. Additionally, they were investigated as fluorescent sensors for various organic and metal cations [51

Organic thermally activated delayed fluorescence material with strained benzoguanidine donor

• Alexander C. Brannan,
• Elvie F. P. Beaumont,
• Nguyen Le Phuoc,
• George F. S. Whitehead,
• Mikko Linnolahti and
• Alexander S. Romanov

Beilstein J. Org. Chem. 2023, 19, 1289–1298, doi:10.3762/bjoc.19.95

• fluorescence [1][2][3]. Organic TADF emitters have gained substantial attention in recent years for their prospective application in organic light-emitting diodes (OLEDs), photocatalysis, bioimaging, and sensors [4][5][6]. The ability to harvest both singlet and triplet excitons enable organic TADF emitters to

CuAAC-inspired synthesis of 1,2,3-triazole-bridged porphyrin conjugates: an overview

• Dileep Kumar Singh

Beilstein J. Org. Chem. 2023, 19, 349–379, doi:10.3762/bjoc.19.29

• well as optical properties. Moreover, the versatility of coumarin hybrids finds numerous applications including fluorescent brightening agents [16], optical sensors [17], organic light emitting diodes [18][19], light harvesting materials [20] and fluorescent probes in biological imaging [21]. Therefore

A study of the DIBAL-promoted selective debenzylation of α-cyclodextrin protected with two different benzyl groups

• Naser-Abdul Yousefi,
• Morten L. Zimmermann and
• Mikael Bols

Beilstein J. Org. Chem. 2022, 18, 1553–1559, doi:10.3762/bjoc.18.165

• substances such as pharmaceuticals or fragrances is exploited since it is cheap, harmless and biodegradable [4]. It is also a useful building block for sensors and/or capture devices, advanced materials, and even artificial enzymes. Most such uses require that compound 1 can be chemically modified so that

1,4,6,10-Tetraazaadamantanes (TAADs) with N-amino groups: synthesis and formation of boron chelates and host–guest complexes

• Artem N. Semakin,
• Ivan S. Golovanov,
• Yulia V. Nelyubina and
• Alexey Yu. Sukhorukov

Beilstein J. Org. Chem. 2022, 18, 1424–1434, doi:10.3762/bjoc.18.148

• Tripodal molecules are widely used as chelating ligands for transition metal catalysis [1][2][3], sensors for ions and small molecules [4][5], reagents for surface grafting [6], building blocks for the construction of supramolecular structures [7], polycyclic cage molecules [8], and porous materials [9

Thermally activated delayed fluorescence (TADF) emitters: sensing and boosting spin-flipping by aggregation

• Ashish Kumar Mazumdar,
• Gyana Prakash Nanda,
• Nisha Yadav,
• Upasana Deori,
• Upasha Acharyya,
• Bahadur Sk and
• Pachaiyappan Rajamalli

Beilstein J. Org. Chem. 2022, 18, 1177–1187, doi:10.3762/bjoc.18.122

• detecting organic acid vapor at ambient conditions is challenging for solid-state detectors. Therefore, developing a solid-state emitter with reversible switching of the optical properties by external stimuli, such as acid and base vapors, is important. As per the recent literature, such sensors are being

• disruption of the molecular conjugation or ICT interactions upon protonation or deprotonation would lead to switching of the optical properties. While there are many reports on acid–based sensors, TADF emitter-based sensors are rare in the literature. In this context, we chose the D–A molecular design to

Synthesis, optical and electrochemical properties of (D–π)₂-type and (D–π)₂Ph-type fluorescent dyes

• Kosuke Takemura,
• Kazuki Ohira,
• Taiki Higashino,
• Keiichi Imato and
• Yousuke Ooyama

Beilstein J. Org. Chem. 2022, 18, 1047–1054, doi:10.3762/bjoc.18.106

• ][16][17][18][19][20][21][22], as well as fluorescent probes [23][24][25][26][27][28] for bioimaging and fluorescent sensors for specific target species [29][30][31][32]. Among many kinds of organic fluorescent dyes, much efforts have been made on the development of donor–π–acceptor (D–π–A)-type

Syntheses of novel pyridine-based low-molecular-weight luminogens possessing aggregation-induced emission enhancement (AIEE) properties

• Masayori Hagimori,
• Tatsusada Yoshida,
• Yasuhisa Nishimura,
• Yukiko Ogawa and
• Keitaro Tanaka

Beilstein J. Org. Chem. 2022, 18, 580–587, doi:10.3762/bjoc.18.60

• have been reported [7][8][9][10]. Because the aggregated state of AIEE-based compounds is affected by the external environment, these compounds have found use in clinical applications as chemical sensors or fluorescent probes [7][8][9][10]. Pyridine is a nitrogen-containing heterocyclic compound found