Computational toolbox for the analysis of protein–glycan interactions

• Ferran Nieto-Fabregat,
• Maria Pia Lenza,
• Angela Marseglia,
• Cristina Di Carluccio,
• Antonio Molinaro,
• Alba Silipo and
• Roberta Marchetti

Beilstein J. Org. Chem. 2024, 20, 2084–2107, doi:10.3762/bjoc.20.180

Multicomponent syntheses of pyrazoles via (3 + 2)-cyclocondensation and (3 + 2)-cycloaddition key steps

• Ignaz Betcke,
• Alissa C. Götzinger,
• Maryna M. Kornet and
• Thomas J. J. Müller

Beilstein J. Org. Chem. 2024, 20, 2024–2077, doi:10.3762/bjoc.20.178

Diastereoselective synthesis of highly substituted cyclohexanones and tetrahydrochromene-4-ones via conjugate addition of curcumins to arylidenemalonates

• Deepa Nair,
• Abhishek Tiwari,
• Banamali Laha and
• Irishi N. N. Namboothiri

Beilstein J. Org. Chem. 2024, 20, 2016–2023, doi:10.3762/bjoc.20.177

• double Michael addition of γ,δ-unsaturated-β-keto esters or Nazarov reagents with suitable acceptors such as nitroalkenes or alkylideneazalactones [7][8][9][10]. From the perspective of an active methylene containing organic moiety, curcumin and its analogs serve as inexpensive and readily available

• strain destabilizes TSII where R is equatorial. Such a strain is avoided by R adopting axial orientation as in TSI, which is favoured, leading to the observed product 3. This has also been seen in previous cases where nitroalkenes and chalcones have been employed as acceptors in the reaction of curcumins

Harnessing the versatility of hydrazones through electrosynthetic oxidative transformations

• Aurélie Claraz

Beilstein J. Org. Chem. 2024, 20, 1988–2004, doi:10.3762/bjoc.20.175

• asymmetric preparation of chiral amines through the addition of nucleophilic partners [21][22] while the azaenamine character of some aldehyde-derived hydrazones has been demonstrated in the coupling with suitable electrophiles such as Michael acceptors [23][24]. Last but not least, the C=N bond of

• hydrazones can act as radical acceptors for the synthesis of functionalized amines or hydrazones through reductive functionalization [21][25][26] or oxidative C(sp2)–H functionalization [27][28], respectively. Consequently, given their rich reactivity profile, exploring new synthetic transformations of

A new platform for the synthesis of diketopyrrolopyrrole derivatives via nucleophilic aromatic substitution reactions

• Vitor A. S. Almodovar and
• Augusto C. Tomé

Beilstein J. Org. Chem. 2024, 20, 1933–1939, doi:10.3762/bjoc.20.169

• used in a wide range of applications, namely as organic semiconductors [8], acceptors for organic solar cells [9][10], as fluorescent probes [11][12][13], or as photosensitizers for photodynamic therapy and antimicrobial photodynamic therapy [14][15][16][17]. DPP derivatives with improved performance

Synthesis and characterization of 1,2,3,4-naphthalene and anthracene diimides

• Adam D. Bass,
• Daniela Castellanos,
• Xavier A. Calicdan and
• Dennis D. Cao

Beilstein J. Org. Chem. 2024, 20, 1767–1772, doi:10.3762/bjoc.20.155

• described isomers and expand the toolbox of electron-deficient aromatic compounds available to organic materials chemists. Keywords: electron acceptors; organic materials; polycyclic aromatic hydrocarbons; Introduction Aromatic diimides are ubiquitous molecular scaffolds that have served as the basis for

New triazinephosphonate dopants for Nafion proton exchange membranes (PEM)

• Fátima C. Teixeira,
• António P. S. Teixeira and
• C. M. Rangel

Beilstein J. Org. Chem. 2024, 20, 1623–1634, doi:10.3762/bjoc.20.145

• that these dopants can act both as a source of protons and proton acceptors, facilitating the intermolecular proton conduction. The rational of the strategy behind the use of amino- and hydroxyphenyl spacers is twofold: i) their inclusion in the structure separates the bulky phosphonate groups from the

pKalculator: A pK_a predictor for C–H bonds

• Rasmus M. Borup,
• Nicolai Ree and
• Jan H. Jensen

Beilstein J. Org. Chem. 2024, 20, 1614–1622, doi:10.3762/bjoc.20.144

• combination with an ML model to predict a variety of properties. These properties encompass the site of metabolism [31][33], the strengths of hydrogen bond donors and acceptors [34][35][36], and the regioselectivity of electrophilic aromatic substitution reactions [14]. Building on the methodology from

Primary amine-catalyzed enantioselective 1,4-Michael addition reaction of pyrazolin-5-ones to α,β-unsaturated ketones

• Pooja Goyal,
• Akhil K. Dubey,
• Raghunath Chowdhury and
• Amey Wadawale

Beilstein J. Org. Chem. 2024, 20, 1518–1526, doi:10.3762/bjoc.20.136

• -ones to a variety of Michael acceptors has emerged as one of the most powerful strategies to access enantioenriched pyrazole derivatives [10][11][12][13][14][15][16][17][18][19][20][21]. In the majority of these cases, the reactivities of the pyrazolin-5-one derivatives were harnessed under non

A comparison of structure, bonding and non-covalent interactions of aryl halide and diarylhalonium halogen-bond donors

• Nicole Javaly,
• Theresa M. McCormick and
• David R. Stuart

Beilstein J. Org. Chem. 2024, 20, 1428–1435, doi:10.3762/bjoc.20.125

• ) are known. However, ΔG cannot be predicted for halogen-bond acceptors other than chloride and a more general predictive model should include parameters to describe the Lewis basic halogen-bond acceptor. Conclusion In this work, we have compared the characteristics of monovalent, hypervalent, neutral

Generation of alkyl and acyl radicals by visible-light photoredox catalysis: direct activation of C–O bonds in organic transformations

• Mithu Roy,
• Bitan Sardar,
• Itu Mallick and
• Dipankar Srimani

Beilstein J. Org. Chem. 2024, 20, 1348–1375, doi:10.3762/bjoc.20.119

• )], regenerating the [Ir(III)] catalyst and completing the catalytic cycle. Overman and co-workers [50] used tert-alkyl N-phthalimidoyl oxalates to produce alkyl radicals that were further reacted with various Michael acceptors (Scheme 13). The photocatalyst Ru(bpy)32+ and Hantzsch ester were essential for the

• oxalates and Michael acceptors. Visible-light-catalyzed and Ni-mediated syn-alkylarylation of alkynes. 1,2-Alkylarylation of alkenes with aryl halides and alkyl oxalates. Deoxygenative borylation of oxalates. Coupling of N-phthalimidoyl oxalates with various acceptors. Cross-coupling of O-alkyl xanthates

Synthesis of indano[60]fullerene thioketone and its application in organic solar cells

• Yong-Chang Zhai,
• Shimon Oiwa,
• Shinobu Aoyagi,
• Shohei Ohno,
• Tsubasa Mikie,
• Jun-Zhuo Wang,
• Hirofumi Amada,
• Koki Yamanaka,
• Kazuhira Miwa,
• Naoyuki Imai,
• Takeshi Igarashi,
• Itaru Osaka and
• Yutaka Matsuo

Beilstein J. Org. Chem. 2024, 20, 1270–1277, doi:10.3762/bjoc.20.109

• (FIDO, FIDS, C60) as electron-acceptors were compared, and the open-circuit voltage with FIDS was 0.16 V higher than that with C60. Keywords: C60; evaporable fullerene derivatives; organic photovoltaics; organic solar cells; thioketone; Introduction Fullerene is a carbon allotrope that has attracted

• derivatives have played an important role both in OPVs as electron acceptors and in PSCs as electron transport layers (ETLs) by efficiently accepting electrons and hindering the transport of holes [12][13][14]. During the past 10 years, considerable attention has been focused on functional fullerene

• evaporable fullerene derivatives as electron acceptors. FIDO exhibited the best performance, with VOC that was 0.18 V higher compared with C60. Although FIDS showed a lower performance due to its less-desirable BHJ structure in the OPV, it could still potentially be utilized in perovskite solar cells in the

Two-fold addition reaction of silylene to C₆₀: structural and electronic properties of a bis-adduct

• Masahiro Kako,
• Masato Kai,
• Masanori Yasui,
• Michio Yamada,
• Yutaka Maeda and
• Takeshi Akasaka

Beilstein J. Org. Chem. 2024, 20, 1179–1188, doi:10.3762/bjoc.20.100

• with excellent properties as organic photovoltaic materials [9][10][11][12][13][14]. Furthermore, regioisomerically pure bis-functionalized fullerenes function better as electron acceptors in organic thin-film solar cells than mixtures of the corresponding regioisomers do [12][13][14]. Therefore

Structure–property relationships in dicyanopyrazinoquinoxalines and their hydrogen-bonding-capable dihydropyrazinoquinoxalinedione derivatives

• Tural N. Akhmedov,
• Ajeet Kumar,
• Daken J. Starkenburg,
• Kyle J. Chesney,
• Khalil A. Abboud,
• Novruz G. Akhmedov,
• Jiangeng Xue and
• Ronald K. Castellano

Beilstein J. Org. Chem. 2024, 20, 1037–1052, doi:10.3762/bjoc.20.92

• displaying some localization on the dicyanopyrazinopyrazine acceptor. Notably, compound 3a displays the highest orbital density separation between donors and acceptors – an attribute relevant to efficient intramolecular charge transfer processes. This aligns with the observed lower optical HOMO–LUMO gap for

Organic electron transport materials

• Joseph Cameron and
• Peter J. Skabara

Beilstein J. Org. Chem. 2024, 20, 672–674, doi:10.3762/bjoc.20.60

• Joseph Cameron Peter J. Skabara School of Chemistry, University of Glasgow, University Avenue, Glasgow, G12 8QQ, UK 10.3762/bjoc.20.60 Keywords: acceptors; electron transport material; electron-deficient; n-type; organic semiconductors; There has been much interest in developing electron

• react with acceptors to produce reducing radical species, capable of reducing organic electron transport materials with a low electron affinity [4][5]. It is not only in modifying the molecular structure to improve the electron accepting ability that there is innovation in new organic electron transport

Switchable molecular tweezers: design and applications

• Pablo Msellem,
• Maksym Dekthiarenko,
• Nihal Hadj Seyd and
• Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

Mechanisms for radical reactions initiating from N-hydroxyphthalimide esters

• Carlos R. Azpilcueta-Nicolas and
• Jean-Philip Lumb

Beilstein J. Org. Chem. 2024, 20, 346–378, doi:10.3762/bjoc.20.35

• oxyalkylation product 28. Li and co-workers described the activation of NHPI esters towards SET using a Lewis acid catalyst, allowing for the functionalization of styrene radical acceptors with nucleophiles that do not necessarily engage in hydrogen-bonding interactions, such as electron-rich (hetero)arenes [47

Photochromic derivatives of indigo: historical overview of development, challenges and applications

• Gökhan Kaplan,
• Zeynel Seferoğlu and
• Daria V. Berdnikova

Beilstein J. Org. Chem. 2024, 20, 228–242, doi:10.3762/bjoc.20.23

• involved in the main indigo chromophore comprising a C=C double bond substituted by two acceptors and two donor groups (Figure 4) [18]. Notably, the benzene rings make just a small contribution to the chromophore. In other words, the primary chromophore of indigo consists of two intersecting merocyanine

Optimizations of lipid II synthesis: an essential glycolipid precursor in bacterial cell wall synthesis and a validated antibiotic target

• Milandip Karak,
• Cian R. Cloonan,
• Brad R. Baker,
• Rachel V. K. Cochrane and
• Stephen A. Cochrane

Beilstein J. Org. Chem. 2024, 20, 220–227, doi:10.3762/bjoc.20.22

• combinations of protecting groups on glycosyl acceptors and donors, as represented by compounds 1a and 2a in Figure 2, are proficient in the efficient generation of lipid II disaccharide [35][36]. Subsequently, significant endeavors have been directed towards the exploration of glycosyl donors, such as N

• disaccharide synthesis alongside C6-protected acceptors (2a or 2b in Figure 2) [10][11][14][15][37][38]. More recently, an innovative one-pot glycosylation approach using a (2,6-dichloro-4-methoxyphenyl)(2,4-dichlorophenyl)-protected glycosyl acceptor has been developed, demonstrating satisfactory stability

• under Schmidt glycosylation conditions [18]. In general, the outcome of glycosylation hinges on the specific pairing of glycosyl donors and glycosyl acceptors employed in the reaction. Notably, when glycosyl donors such as 1e–g, featuring acyl group protection at the C2 position, are combined with

Comparison of glycosyl donors: a supramer approach

• Anna V. Orlova,
• Nelly N. Malysheva,
• Maria V. Panova,
• Nikita M. Podvalnyy,
• Michael G. Medvedev and
• Leonid O. Kononov

Beilstein J. Org. Chem. 2024, 20, 181–192, doi:10.3762/bjoc.20.18

• acceptors (Aka values) [72]. Surprisingly, as the results obtained in this study suggest, such comparison of results of glycosylation experiments at identical concentrations is not enough to get reliable data on the relative reactivity and stereoselectivity of glycosyl donors even if the structural

Perspectives on push–pull chromophores derived from click-type [2 + 2] cycloaddition–retroelectrocyclization reactions of electron-rich alkynes and electron-deficient alkenes

• Michio Yamada

Beilstein J. Org. Chem. 2024, 20, 125–154, doi:10.3762/bjoc.20.13

• guaranteeing long-lived CS states. Guldi et al. synthesized 16 distinct donor–acceptor conjugated molecules, denoted as 89–104 (Figure 11). These molecules comprised ZnP as an electron donor and push–pull chromophores with varying reduction potentials as electron acceptors interconnected by various rigid

Multi-redox indenofluorene chromophores incorporating dithiafulvene donor and ene/enediyne acceptor units

• Christina Schøttler,
• Kasper Lund-Rasmussen,
• Line Broløs,
• Philip Vinterberg,
• Ema Bazikova,
• Viktor B. R. Pedersen and
• Mogens Brøndsted Nielsen

Beilstein J. Org. Chem. 2024, 20, 59–73, doi:10.3762/bjoc.20.8

• acetylenic scaffolds comprised of enediyne units are known to behave as good electron acceptors [15][16], and we became interested in combining the IF-DTF scaffold with such motifs to generate novel multi-redox systems. For example, the radiaannulene moiety RA shown in Figure 1 (or its truncated counterpart

• other hand, they are stronger acceptors than the acetylenic scaffold 22 containing the DTF donor. We have previously [33] studied a related compound in which all four triisopropylsilylethynyl substituents of 26 are replaced by cyano groups; this compound showed superior acceptor properties, being

Using the phospha-Michael reaction for making phosphonium phenolate zwitterions

• Matthias R. Steiner,
• Max Schmallegger,
• Larissa Donner,
• Johann A. Hlina,
• Christoph Marschner,
• Judith Baumgartner and
• Christian Slugovc

Beilstein J. Org. Chem. 2024, 20, 41–51, doi:10.3762/bjoc.20.6

• University of Technology, Stremayrgasse 9, 8010 Graz, Austria 10.3762/bjoc.20.6 Abstract The reactions of 2,4-di-tert-butyl-6-(diphenylphosphino)phenol and various Michael acceptors (acrylonitrile, acrylamide, methyl vinyl ketone, several acrylates, methyl vinyl sulfone) yield the respective phosphonium

• phenolate zwitterions at room temperature. Nine different zwitterions were synthesized and fully characterized. Zwitterions with the poor Michael acceptors methyl methacrylate and methyl crotonate formed, but could not be isolated in pure form. The solid-state structures of two phosphonium phenolate

• and exhibit a negative solvatochromism. An analysis of the kinetics of the zwitterion formation was performed for three Michael acceptors (acrylonitrile, methyl acrylate, and acrylamide) in two different solvents (chloroform and methanol). The results revealed the proton transfer step necessary to

Beyond n-dopants for organic semiconductors: use of bibenzo[d]imidazoles in UV-promoted dehalogenation reactions of organic halides

• Kan Tang,
• Megan R. Brown,
• Chad Risko,
• Melissa K. Gish,
• Garry Rumbles,
• Phuc H. Pham,
• Oana R. Luca,
• Stephen Barlow and
• Seth R. Marder

Beilstein J. Org. Chem. 2023, 19, 1912–1922, doi:10.3762/bjoc.19.142

• -iodobenzyl chloride. Reaction mechanisms for the reactions of dimeric reductants (D2) such as (Y-DMBI)2 derivatives with acceptors (A) such as organic semiconductors or, in this work, organic halides that react further (the relative rates of steps are indicated for cases where the A reduction potential falls

Anion–π catalysis on carbon allotropes

• M. Ángeles Gutiérrez López,
• Mei-Ling Tan,
• Giacomo Renno,
• Augustina Jozeliūnaitė,
• J. Jonathan Nué-Martinez,
• Javier Lopez-Andarias,
• Naomi Sakai and
• Stefan Matile

Beilstein J. Org. Chem. 2023, 19, 1881–1894, doi:10.3762/bjoc.19.140

• ] are deprotonated, and tautomers I and II add to an enolate acceptor. For anion–π catalysis, nitroolefins like 5 [60] were convenient acceptors because they are compatible with asymmetric catalysis, and because stabilization of intermediate III by privileged nitronate-π interactions drives the reaction

• monomer 22 much less significantly. With less electron-deficient NDIs carrying two sulfide donors in the core, the catalytic activity of 45 dropped below that of fullerene monomer 22. Oxidation of the sulfide donors into sulfoxide acceptors increased the catalytic activity much less than expected, resting