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Search for "structure determination" in Full Text gives 139 result(s) in Beilstein Journal of Organic Chemistry.

Study of the interaction of 2H-furo[3,2-b]pyran-2-ones with nitrogen-containing nucleophiles

  • Constantine V. Milyutin,
  • Andrey N. Komogortsev and
  • Boris V. Lichitsky

Beilstein J. Org. Chem. 2025, 21, 556–563, doi:10.3762/bjoc.21.44

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  • Supporting Information File 2: General information, characterization data, NMR spectra and crystallographic data of synthesized compounds. Acknowledgements Crystal structure determination was performed in the Department of Structural Studies of Zelinsky Institute of Organic Chemistry, Moscow.
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Published 13 Mar 2025

Synthesis of new condensed naphthoquinone, pyran and pyrimidine furancarboxylates

  • Kirill A. Gomonov,
  • Vasilii V. Pelipko,
  • Igor A. Litvinov,
  • Ilya A. Pilipenko,
  • Anna M. Stepanova,
  • Nikolai A. Lapatin,
  • Ruslan I. Baichurin and
  • Sergei V. Makarenko

Beilstein J. Org. Chem. 2025, 21, 340–347, doi:10.3762/bjoc.21.24

Graphical Abstract
  • phase and visualized under UV light (λ 254 nm). X-ray structure determination X-ray diffraction studies of single crystals of compounds 5a, 5b, 6b, 6c, and 7a were carried out on a Bruker D8 QUEST diffractometer. The cell parameters and experimental data were obtained at 100 K (graphite monochromator
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Published 12 Feb 2025

Controlled oligomerization of [1.1.1]propellane through radical polarity matching: selective synthesis of SF5- and CF3SF4-containing [2]staffanes

  • Jón Atiba Buldt,
  • Wang-Yeuk Kong,
  • Yannick Kraemer,
  • Masiel M. Belsuzarri,
  • Ansh Hiten Patel,
  • James C. Fettinger,
  • Dean J. Tantillo and
  • Cody Ross Pitts

Beilstein J. Org. Chem. 2024, 20, 3134–3143, doi:10.3762/bjoc.20.259

Graphical Abstract
  • , we confirmed that a phase transition had occurred following structure determination at 240 K [78][79]. The X-ray data revealed that 3 crystallizes in the centrosymmetric orthorhombic space group Pnma in the high temperature phase (HTP) with cell axes a = 21.56 Å, b = 8.95 Å, and c = 7.28 Å, in
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Published 29 Nov 2024

Tunable full-color dual-state (solution and solid) emission of push–pull molecules containing the 1-pyrindane moiety

  • Anastasia I. Ershova,
  • Sergey V. Fedoseev,
  • Konstantin V. Lipin,
  • Mikhail Yu. Ievlev,
  • Oleg E. Nasakin and
  • Oleg V. Ershov

Beilstein J. Org. Chem. 2024, 20, 3016–3025, doi:10.3762/bjoc.20.251

Graphical Abstract
  • the facile preparation of molecular libraries with an emphasis on skeletal diversity for the development of new push–pull molecules. Results and Discussion Synthesis and structure determination A two-step procedure was used to obtain the target compounds (Scheme 1). Cyclopenta[b]pyridine derivative 2
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Published 19 Nov 2024

Applications of microscopy and small angle scattering techniques for the characterisation of supramolecular gels

  • Connor R. M. MacDonald and
  • Emily R. Draper

Beilstein J. Org. Chem. 2024, 20, 2608–2634, doi:10.3762/bjoc.20.220

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Published 16 Oct 2024

Base-promoted cascade recyclization of allomaltol derivatives containing an amide fragment into substituted 3-(1-hydroxyethylidene)tetronic acids

  • Andrey N. Komogortsev,
  • Constantine V. Milyutin and
  • Boris V. Lichitsky

Beilstein J. Org. Chem. 2024, 20, 2585–2591, doi:10.3762/bjoc.20.217

Graphical Abstract
  • , copies of NMR spectra, X-ray crystallographic data and refinement details. Supporting Information File 142: Analytical data of all compounds 4, 7 and 9. Acknowledgements Crystal structure determination was performed in the Department of Structural Studies of Zelinsky Institute of Organic Chemistry
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Published 14 Oct 2024

Synthesis and conformational analysis of pyran inter-halide analogues of ᴅ-talose

  • Olivier Lessard,
  • Mathilde Grosset-Magagne,
  • Paul A. Johnson and
  • Denis Giguère

Beilstein J. Org. Chem. 2024, 20, 2442–2454, doi:10.3762/bjoc.20.208

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  • results showed no qualitative difference. Entries marked – are below the 0.50 kcal/mol threshold. Supporting Information Supporting Information File 118: Experimental and analytical data, crystal structure determination and NMR spectra. Funding This work was supported by the Natural Sciences and
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Published 27 Sep 2024

Tandem diazotization/cyclization approach for the synthesis of a fused 1,2,3-triazinone-furazan/furoxan heterocyclic system

  • Yuri A. Sidunets,
  • Valeriya G. Melekhina and
  • Leonid L. Fershtat

Beilstein J. Org. Chem. 2024, 20, 2342–2348, doi:10.3762/bjoc.20.200

Graphical Abstract
  • . Supporting Information Supporting Information File 96: Experimental procedures, characterization data of all products, copies of 1H, 13C NMR, 15N spectra of new compounds, DSC curves,X-ray crystallographic data and copies of IR spectra. Acknowledgements The crystal structure determination was performed at
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Published 16 Sep 2024

Polymer degrading marine Microbulbifer bacteria: an un(der)utilized source of chemical and biocatalytic novelty

  • Weimao Zhong and
  • Vinayak Agarwal

Beilstein J. Org. Chem. 2024, 20, 1635–1651, doi:10.3762/bjoc.20.146

Graphical Abstract
  • barriers to natural product discovery; high rediscovery rates, reliance on largely serendipitous response in bioactivity assays, and the resources and expertise required for their structure determination being the primary impediments [1][2]. With this background, accessing biological sources that have not
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Published 17 Jul 2024

Synthesis of 1,2,3-triazoles containing an allomaltol moiety from substituted pyrano[2,3-d]isoxazolones via base-promoted Boulton–Katritzky rearrangement

  • Constantine V. Milyutin,
  • Andrey N. Komogortsev and
  • Boris V. Lichitsky

Beilstein J. Org. Chem. 2024, 20, 1334–1340, doi:10.3762/bjoc.20.117

Graphical Abstract
  • File 96: Experimental procedures, characterization data of all products, copies of 1H, 13C NMR, spectra of all new compounds, and X-ray crystallographic data. Acknowledgements The crystal structure determination was performed in the Department of Structural Studies of Zelinsky Institute of Organic
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Published 11 Jun 2024

Isolation and structure determination of a new analog of polycavernosides from marine Okeania sp. cyanobacterium

  • Kairi Umeda,
  • Naoaki Kurisawa,
  • Ghulam Jeelani,
  • Tomoyoshi Nozaki,
  • Kiyotake Suenaga and
  • Arihiro Iwasaki

Beilstein J. Org. Chem. 2024, 20, 645–652, doi:10.3762/bjoc.20.57

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Published 21 Mar 2024

Cycloaddition reactions of heterocyclic azides with 2-cyanoacetamidines as a new route to C,N-diheteroarylcarbamidines

  • Pavel S. Silaichev,
  • Tetyana V. Beryozkina,
  • Vsevolod V. Melekhin,
  • Valeriy O. Filimonov,
  • Andrey N. Maslivets,
  • Vladimir G. Ilkin,
  • Wim Dehaen and
  • Vasiliy A. Bakulev

Beilstein J. Org. Chem. 2024, 20, 17–24, doi:10.3762/bjoc.20.3

Graphical Abstract
  • , 174.5; IR (ATR, KBr, cm−1): ν 3400, 3359, 3255, 1625, 1602, 1563, 1554, 1508, 1495, 1483, 1455, 1436, 1425, 1402, 1385, 1356, 1332, 1319, 1303, 1283, 1257, 1215, 1151, 1095, 1067, 1053, 1035, 1011; HRMS–ESI-TOF (m/z): [M + H]+ calcd for C13H14N7S+, 300.1026; found, 300.1031. X-ray structure
  • determination 3g: Crystal data for C15H22N8O2 (M = 346.40 g/mol): monoclinic, space group P21/c (no. 14), a = 14.734(3) Å, b = 9.000(2) Å, c = 13.125(4) Å, β = 104.29°, V = 1686.6(8)Å3, Z = 4, T = 295(2) K, μ(Mo Kα) = 0.097 mm−1, Dcalc = 1.364 g/cm3, 6415 reflections measured (5.4° ≤ 2Θ ≤ 59°), 6415 unique (R
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Published 05 Jan 2024

Selective construction of dispiro[indoline-3,2'-quinoline-3',3''-indoline] and dispiro[indoline-3,2'-pyrrole-3',3''-indoline] via three-component reaction

  • Ziying Xiao,
  • Fengshun Xu,
  • Jing Sun and
  • Chao-Guo Yan

Beilstein J. Org. Chem. 2023, 19, 1234–1242, doi:10.3762/bjoc.19.91

Graphical Abstract
  • group in the neighboring oxindole scaffold. Therefore, it can be concluded that the obtained dispiro compounds 3a–m have this kind of relative configuration on the basis of 1H NMR spectra and crystal structure determination. It should be pointed out that ammonium acetate was employed as nitrogen source
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Published 22 Aug 2023

Cyanothioacetamides as a synthetic platform for the synthesis of aminopyrazole derivatives

  • Valeriy O. Filimonov,
  • Alexandra I. Topchiy,
  • Vladimir G. Ilkin,
  • Tetyana V. Beryozkina and
  • Vasiliy A. Bakulev

Beilstein J. Org. Chem. 2023, 19, 1191–1197, doi:10.3762/bjoc.19.87

Graphical Abstract
  • -(substituted)phenylsulfonyl-4-thiocarbamoylpyrazoles in moderate to high yields. It was concluded that in 2-cyanothioacetamides, cyano and enamino groups are more active in the reaction with hydrazines than the thiocarbamoyl function. Experimental X-ray structure determination of 5b, 6a, 7a 5b: Crystal data
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Published 08 Aug 2023

Synthesis of imidazo[4,5-e][1,3]thiazino[2,3-c][1,2,4]triazines via a base-induced rearrangement of functionalized imidazo[4,5-e]thiazolo[2,3-c][1,2,4]triazines

  • Dmitry B. Vinogradov,
  • Alexei N. Izmest’ev,
  • Angelina N. Kravchenko,
  • Yuri A. Strelenko and
  • Galina A. Gazieva

Beilstein J. Org. Chem. 2023, 19, 1047–1054, doi:10.3762/bjoc.19.80

Graphical Abstract
  • . Acknowledgements Crystal structure determination was performed in the Department of Structural Studies of the N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences.
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Published 28 Jul 2023

A fluorescent probe for detection of Hg2+ ions constructed by tetramethyl cucurbit[6]uril and 1,2-bis(4-pyridyl)ethene

  • Xiaoqian Chen,
  • Naqin Yang,
  • Yue Ma,
  • Xinan Yang and
  • Peihua Ma

Beilstein J. Org. Chem. 2023, 19, 864–872, doi:10.3762/bjoc.19.63

Graphical Abstract
  • structure of the inclusion complex formed by TMeQ[6] and G was obtained using X-ray single-crystal diffraction analysis. The crystal data and parameters are shown in Table 2. The single-crystal structure determination shows that the inclusion complex crystallizes in the triclinic crystal system, with the
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Published 13 Jun 2023

Revisiting the bromination of 3β-hydroxycholest-5-ene with CBr4/PPh3 and the subsequent azidolysis of the resulting bromide, disparity in stereochemical behavior

  • Christian Schumacher,
  • Jas S. Ward,
  • Kari Rissanen,
  • Carsten Bolm and
  • Mohamed Ramadan El Sayed Aly

Beilstein J. Org. Chem. 2023, 19, 91–99, doi:10.3762/bjoc.19.9

Graphical Abstract
  • different mesh numbers. Single crystals of both were obtained by slow evaporation from diethyl ether. The less polar, minor material gave ice-white needles, and an X-ray single crystal structure determination revealed the product to be cholesta-3,5-diene (9, Figure 3). The 1H NMR data of 9 are in full
  • assignment of 4 was unequivocally confirmed by X-ray crystal structure determination. Compound 4 was erroneously reported to have the α-configuration at C3 [10]. Now, the NMR chemical shift data of 4 are in full agreement with those reported earlier [12]. The reaction of 3-bromocholest-5-ene with NaN3 in DMF
  • the azido substituent on the β-face of the steroid (compound 6). Conclusion For each product 4, 5 and 9 the stereochemical assignment has now been confirmed by X-ray single crystal structure determination, and the NMR data are in agreement with those of previous reports. Former structural
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Published 27 Jan 2023

Improving the accuracy of 31P NMR chemical shift calculations by use of scaling methods

  • William H. Hersh and
  • Tsz-Yeung Chan

Beilstein J. Org. Chem. 2023, 19, 36–56, doi:10.3762/bjoc.19.4

Graphical Abstract
  • ; stereoisomers; Introduction Calculation of 1H and 13C NMR chemical shifts and coupling constants using density functional theory (DFT) has increasingly become an adjunct to structure determination [1][2][3][4][5][6][7][8]. In particular for complex organic compounds, determination of relative stereochemistry
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Published 10 Jan 2023

On Reuben G. Jones synthesis of 2-hydroxypyrazines

  • Pierre Legrand and
  • Yves L. Janin

Beilstein J. Org. Chem. 2022, 18, 935–943, doi:10.3762/bjoc.18.93

Graphical Abstract
  • (2{2}) gave unprecedented yields of the hydroxypyrazines 3{3,2}, 3{4,2}, or 3{5,2} along with only traces of the corresponding isomers in the latter two cases. Experimental X-ray-based structure determination. As further detailed in Supporting Information File 1, the structural elucidation of
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Published 29 Jul 2022

Structural basis for endoperoxide-forming oxygenases

  • Takahiro Mori and
  • Ikuro Abe

Beilstein J. Org. Chem. 2022, 18, 707–721, doi:10.3762/bjoc.18.71

Graphical Abstract
  • from Chenopodium ambrosioides, the sequence, structural, and mechanistic analyses have not been vigorously pursued [24]. While many review articles on the structure determination, biological analysis, and synthesis of endoperoxide-containing natural products have been reported [1][2][3][4][5][6][7][11
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Published 21 Jun 2022

Organocatalytic asymmetric nitroso aldol reaction of α-substituted malonamates

  • Ekta Gupta,
  • Narendra Kumar Vaishanv,
  • Sandeep Kumar,
  • Raja Krishnan Purshottam,
  • Ruchir Kant and
  • Kishor Mohanan

Beilstein J. Org. Chem. 2022, 18, 217–224, doi:10.3762/bjoc.18.25

Graphical Abstract
  • , single-crystal X-ray data of 4a, copies of NMR spectra, and HPLC chromatograms. Acknowledgements We thank Dr. Tejender S. Thakur, MSB division, CSIR-CDRI for supervising the X-ray data collection and structure determination. The SAIF division is acknowledged for the analytical support. CDRI
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Published 21 Feb 2022

The PIFA-initiated oxidative cyclization of 2-(3-butenyl)quinazolin-4(3H)-ones – an efficient approach to 1-(hydroxymethyl)-2,3-dihydropyrrolo[1,2-a]quinazolin-5(1H)-ones

  • Alla I. Vaskevych,
  • Nataliia O. Savinchuk,
  • Ruslan I. Vaskevych,
  • Eduard B. Rusanov,
  • Oleksandr O. Grygorenko and
  • Mykhailo V. Vovk

Beilstein J. Org. Chem. 2021, 17, 2787–2794, doi:10.3762/bjoc.17.189

Graphical Abstract
  • of 2-(buten-3-yl)quinazolin-4(3H)-ones 7. Optimization of the reaction conditionsa. Synthesis of 1-(hydroxymethyl)-2,3-dihydropyrroloquinazolin-5(1H)-ones 6. Supporting Information Supporting Information File 376: Detailed experimental procedures for all compounds and precursors, X-ray structure
  • determination, 1H/13C/19F NMR spectra for all compounds.
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Published 25 Nov 2021

Nomimicins B–D, new tetronate-class polyketides from a marine-derived actinomycete of the genus Actinomadura

  • Zhiwei Zhang,
  • Tao Zhou,
  • Taehui Yang,
  • Keisuke Fukaya,
  • Enjuro Harunari,
  • Shun Saito,
  • Katsuhisa Yamada,
  • Chiaki Imada,
  • Daisuke Urabe and
  • Yasuhiro Igarashi

Beilstein J. Org. Chem. 2021, 17, 2194–2202, doi:10.3762/bjoc.17.141

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  • actinomycete of the genus Actinomadura. We herein describe the isolation, structure determination, and biological activities of 1‒3. Results and Discussion The producing strain Actinomadura sp. AKA43 was isolated from DSW collected at a depth of −800 m in Sagami Bay, Japan. Strain AKA43 was cultured in A16
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Published 27 Aug 2021

A straightforward conversion of 1,4-quinones into polycyclic pyrazoles via [3 + 2]-cycloaddition with fluorinated nitrile imines

  • Greta Utecht-Jarzyńska,
  • Karolina Nagła,
  • Grzegorz Mlostoń,
  • Heinz Heimgartner,
  • Marcin Palusiak and
  • Marcin Jasiński

Beilstein J. Org. Chem. 2021, 17, 1509–1517, doi:10.3762/bjoc.17.108

Graphical Abstract
  • nitrile imine 7a generated from 8a. Supporting Information Supporting Information File 246: General information and experimental data of all isolated products, details of the crystal structure determination, and copies of 1H and 13C NMR spectra for all products. Funding Financial support by the
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Published 28 Jun 2021

Structural effects of meso-halogenation on porphyrins

  • Keith J. Flanagan,
  • Maximilian Paradiz Dominguez,
  • Zoi Melissari,
  • Hans-Georg Eckhardt,
  • René M. Williams,
  • Dáire Gibbons,
  • Caroline Prior,
  • Gemma M. Locke,
  • Alina Meindl,
  • Aoife A. Ryan and
  • Mathias O. Senge

Beilstein J. Org. Chem. 2021, 17, 1149–1170, doi:10.3762/bjoc.17.88

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Published 14 May 2021
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