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Search for "X-ray analysis" in Full Text gives 341 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Radical reactivity of antiaromatic Ni(II) norcorroles with azo radical initiators

  • Siham Asyiqin Shafie,
  • Ryo Nozawa,
  • Hideaki Takano and
  • Hiroshi Shinokubo

Beilstein J. Org. Chem. 2024, 20, 1967–1972, doi:10.3762/bjoc.20.172

Graphical Abstract
  • toluene (Scheme 1). The reaction smoothly proceeded to afford dialkylated macrocycle 2a in 92% yield. In addition to 2a, monoalkylated product 3a and dipyrrin dimer 4a were obtained as minor products in 4% and 3% yield, respectively. The structure of 2a was unambiguously confirmed by single-crystal X-ray
  • analysis, which revealed that two alkyl substituents were located on the same side of the molecule (Figure 2a). Compared to the planar structure of 1 (Figure 2b) [2], 2a displays a nonplanar structure due to the sp3 carbon atoms adjacent to the nitrogen atoms. The 1H NMR spectrum of 2a confirmed that the
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Published 12 Aug 2024

Access to 2-oxoazetidine-3-carboxylic acid derivatives via thermal microwave-assisted Wolff rearrangement of 3-diazotetramic acids in the presence of nucleophiles

  • Ivan Lyutin,
  • Vasilisa Krivovicheva,
  • Grigory Kantin and
  • Dmitry Dar’in

Beilstein J. Org. Chem. 2024, 20, 1894–1899, doi:10.3762/bjoc.20.164

Graphical Abstract
  • two diastereomers, lying in the intervals 5.5–6.0 Hz and 1.5–2.5 Hz for the cis and trans forms, respectively [33][34]. This makes it easy to assign the stereochemistry of the products obtained. Additional confirmation was gained from X-ray analysis data for structure 3t (Scheme 2). In some cases, we
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Published 05 Aug 2024

Synthesis of 1,2,3-triazoles containing an allomaltol moiety from substituted pyrano[2,3-d]isoxazolones via base-promoted Boulton–Katritzky rearrangement

  • Constantine V. Milyutin,
  • Andrey N. Komogortsev and
  • Boris V. Lichitsky

Beilstein J. Org. Chem. 2024, 20, 1334–1340, doi:10.3762/bjoc.20.117

Graphical Abstract
  • types of aforementioned structures were proved by X-ray analysis. Keywords: allomaltol; Boulton–Katritzky rearrangement; hydrazones; pyrano[2,3-d]isoxazolones; recyclization; 1,2,3-triazoles; Introduction The Boulton–Katritzky rearrangement (BKR) also known as mononuclear heterocyclic rearrangement is
  • spectroscopy and high-resolution mass spectrometry. Moreover, X-ray analysis was used for confirmation of structure of compound 4g (Figure 1). A plausible mechanism of the studied rearrangement is presented in Scheme 5. At first, anion A is generated from starting hydrazone 3 under action of base. Next
  • obtained the recyclized product 6a (Scheme 6), whose structure was confirmed by 1H, 13C NMR spectroscopy, high-resolution mass spectrometry and X-ray analysis. Based on the aforementioned reaction we have synthesized a set of pyrazolylisoxazoles 6 (Scheme 7). The proposed mechanism of investigated
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Published 11 Jun 2024

Synthesis of indano[60]fullerene thioketone and its application in organic solar cells

  • Yong-Chang Zhai,
  • Shimon Oiwa,
  • Shinobu Aoyagi,
  • Shohei Ohno,
  • Tsubasa Mikie,
  • Jun-Zhuo Wang,
  • Hirofumi Amada,
  • Koki Yamanaka,
  • Kazuhira Miwa,
  • Naoyuki Imai,
  • Takeshi Igarashi,
  • Itaru Osaka and
  • Yutaka Matsuo

Beilstein J. Org. Chem. 2024, 20, 1270–1277, doi:10.3762/bjoc.20.109

Graphical Abstract
  • -withdrawing substituents. Computational studies with density functional theory revealed the unique vibrations of the thioketone group in FIDS. The molecular structure of FIDS was confirmed by single-crystal X-ray analysis. Bulk heterojunction organic solar cells using three evaporable fullerene derivatives
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Published 31 May 2024

Competing electrophilic substitution and oxidative polymerization of arylamines with selenium dioxide

  • Vishnu Selladurai and
  • Selvakumar Karuthapandi

Beilstein J. Org. Chem. 2024, 20, 1221–1235, doi:10.3762/bjoc.20.105

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  • methyl anthranilate with SeO2 (vide infra), which was also supported by single-crystal X-ray analysis. However, for aniline, in addition to the major polymerization and poor selenation process, solvent oxidation was also noted. Importantly, through column chromatography, the oxamide derivative 3 formed
  • account. Characterization of the organoselenium compounds by HRMS, 1H, and 13C NMR was supported by 77Se NMR and single-crystal X-ray analysis in order to confirm the identity of the compounds. Experimental General procedures All syntheses were carried out using the standard Schlenk line in a nitrogen
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Published 27 May 2024

Manganese-catalyzed C–C and C–N bond formation with alcohols via borrowing hydrogen or hydrogen auto-transfer

  • Mohd Farhan Ansari,
  • Atul Kumar Maurya,
  • Abhishek Kumar and
  • Saravanakumar Elangovan

Beilstein J. Org. Chem. 2024, 20, 1111–1166, doi:10.3762/bjoc.20.98

Graphical Abstract
  • products (Scheme 5). Interestingly, the dearomatized intermediate resulting from the reaction of base and Mn3 was isolated and characterized by X-ray analysis during the mechanistic investigation. In 2018, Kempe et al. disclosed that the choice of the base plays a critical role in the BH method for the
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Published 21 May 2024

Mild and efficient synthesis and base-promoted rearrangement of novel isoxazolo[4,5-b]pyridines

  • Vladislav V. Nikol’skiy,
  • Mikhail E. Minyaev,
  • Maxim A. Bastrakov and
  • Alexey M. Starosotnikov

Beilstein J. Org. Chem. 2024, 20, 1069–1075, doi:10.3762/bjoc.20.94

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  • . Yields of compounds 12 and 13. Supporting Information Supporting Information File 16: Experimental section, NMR spectra and X-ray analysis data.
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Published 14 May 2024

Structure–property relationships in dicyanopyrazinoquinoxalines and their hydrogen-bonding-capable dihydropyrazinoquinoxalinedione derivatives

  • Tural N. Akhmedov,
  • Ajeet Kumar,
  • Daken J. Starkenburg,
  • Kyle J. Chesney,
  • Khalil A. Abboud,
  • Novruz G. Akhmedov,
  • Jiangeng Xue and
  • Ronald K. Castellano

Beilstein J. Org. Chem. 2024, 20, 1037–1052, doi:10.3762/bjoc.20.92

Graphical Abstract
  • moderate to excellent hole transport mobilities (1.5 × 10−3 and 1.5 cm2/Vs, respectively) [21]. In 2012, Miao et al. reported an H-bonding capable 1,4-dihydropyrazinopyrazine fragment within N-heteroacenes [22]. The X-ray analysis of single crystals revealed the formation of highly-ordered ribbons
  • -crystal X-ray analysis of 2b, and its important structural parameters were compared with that of 2a (#CCDC 227464) reported in the literature [25]. An improved 2D nanostructure through highly ordered organization facilitated by H-bonding is revealed. Notably, the C–C distance between two carbonyl groups
  • X-ray analysis of other DPQDs 5b and 6b did not reveal a herringbone lattice pattern, as shown in Tables S5 and S6 and Figures S42–S45 (Supporting Information File 1). In the case of 5b, this is presumably due to the twisted phenyl rings that dictate the packing arrangement. Nonetheless, close π
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Published 08 May 2024

One-pot Ugi-azide and Heck reactions for the synthesis of heterocyclic systems containing tetrazole and 1,2,3,4-tetrahydroisoquinoline

  • Jiawei Niu,
  • Yuhui Wang,
  • Shenghu Yan,
  • Yue Zhang,
  • Xiaoming Ma,
  • Qiang Zhang and
  • Wei Zhang

Beilstein J. Org. Chem. 2024, 20, 912–920, doi:10.3762/bjoc.20.81

Graphical Abstract
  • and 13C NMR, and HRMS analysis. In addition, single crystals of compound 6d and 8c were obtained for X-ray analysis to confirm the structures (Figure 2). Conclusion In conclusion, we have developed a one-pot synthesis with two or three steps for making tetrazolo-pyrazino[2,1-a]isoquinolin-6(5H)-ones
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Published 23 Apr 2024

Regioselective quinazoline C2 modifications through the azide–tetrazole tautomeric equilibrium

  • Dāgs Dāvis Līpiņš,
  • Andris Jeminejs,
  • Una Ušacka,
  • Anatoly Mishnev,
  • Māris Turks and
  • Irina Novosjolova

Beilstein J. Org. Chem. 2024, 20, 675–683, doi:10.3762/bjoc.20.61

Graphical Abstract
  • of 4-azido-6,7-dimethoxy-2-sulfonylquinazoline derivatives 12 were proven by chemical synthesis of the regioisomers 15 (Scheme 7) and X-ray analysis of 12a (Scheme 6). 6,7-Dimethoxy-2,4-diazidoquinazoline (13) was synthesized from commercially available dichloroquinazoline 7 in 93% yield. Further
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Published 28 Mar 2024

Synthesis of photo- and ionochromic N-acylated 2-(aminomethylene)benzo[b]thiophene-3(2Н)-ones with a terminal phenanthroline group

  • Vladimir P. Rybalkin,
  • Sofiya Yu. Zmeeva,
  • Lidiya L. Popova,
  • Irina V. Dubonosova,
  • Olga Yu. Karlutova,
  • Oleg P. Demidov,
  • Alexander D. Dubonosov and
  • Vladimir A. Bren

Beilstein J. Org. Chem. 2024, 20, 552–560, doi:10.3762/bjoc.20.47

Graphical Abstract
  • Information File 28: X-ray analysis data of 3b. Funding This study was financially supported by the Ministry of Science and Higher Education of the Russian Federation in the scope of the State Task in the Field of Science (No. FENW_2023-0020) and in the scope of the State Task to the Southern Scientific
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Published 11 Mar 2024

Enhanced host–guest interaction between [10]cycloparaphenylene ([10]CPP) and [5]CPP by cationic charges

  • Eiichi Kayahara,
  • Yoshiyuki Mizuhata and
  • Shigeru Yamago

Beilstein J. Org. Chem. 2024, 20, 436–444, doi:10.3762/bjoc.20.38

Graphical Abstract
  • observations also agree well with the change in oxidation and reduction potentials upon complex formation observed in the electrochemical analysis. The double-layered structure of the complex was unambiguously determined by single-crystal X-ray analysis (Figure 7), which was performed on a crystal obtained by
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Published 23 Feb 2024

Spatial arrangements of cyclodextrin host–guest complexes in solution studied by 13C NMR and molecular modelling

  • Konstantin Lebedinskiy,
  • Ivan Barvík,
  • Zdeněk Tošner,
  • Ivana Císařová,
  • Jindřich Jindřich and
  • Radim Hrdina

Beilstein J. Org. Chem. 2024, 20, 331–335, doi:10.3762/bjoc.20.33

Graphical Abstract
  • modelling and solid-state X-ray analysis, provides a detailed description of the spatial arrangement of cyclodextrin host–guest complexes in solution. The chiral cavity of the cyclodextrin molecule creates an anisotropic environment for the guest molecule resulting in a splitting of its prochiral carbon
  • -cyclodextrins. Compounds 1, 6 and 8 are commercial, compounds 2–5 [21] and 7 [22] were prepared according to published procedures. Compound 2 (as a free amine) crystallized in the supramolecular capsule of two α-cyclodextrins, and the mono-crystal was subjected to X-ray analysis. This experiment was performed
  • . The 3D densities show the spatial distribution of prochiral atoms within MD simulations. Studied host–guest complexes and splitting of guests’ prochiral carbons in their 13C NMR spectra. Molecular modelling of the host–guest complexes of compound 4 with α-CD, β-CD and γ-CD. X-ray analysis of the α-CD
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Published 20 Feb 2024

Photochromic derivatives of indigo: historical overview of development, challenges and applications

  • Gökhan Kaplan,
  • Zeynel Seferoğlu and
  • Daria V. Berdnikova

Beilstein J. Org. Chem. 2024, 20, 228–242, doi:10.3762/bjoc.20.23

Graphical Abstract
  • of indigo in 1) DMSO, 2) DMF, 3) N-methyl-2-pyrrolidone. Bond length in the indigo molecule obtained from the single crystal X-ray analysis [12], the typical bond lengths in organic compounds [15] and the main resonance structures of indigo. The structure of the indigo chromophore (H-chromophore
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Published 07 Feb 2024

Comparison of glycosyl donors: a supramer approach

  • Anna V. Orlova,
  • Nelly N. Malysheva,
  • Maria V. Panova,
  • Nikita M. Podvalnyy,
  • Michael G. Medvedev and
  • Leonid O. Kononov

Beilstein J. Org. Chem. 2024, 20, 181–192, doi:10.3762/bjoc.20.18

Graphical Abstract
  • NMR (282 MHz, acetone-d6, δ, ppm) −77.1; HRESIMS (m/z): [M + Na]+ calcd for C22H24Cl2F3NNaO10S, 644.0342; found, 644.0349 . For the details of the single crystal X-ray analysis data for compound 7 (CCDC 1843708) see Supporting Information File 1 and Supporting Information File 2. Typical glycosylation
  • sialylation reaction. TFA = CF3CO; ClAc = ClCH2CO. Synthesis of sialyl donor 2. SR values and types of supramers in solutions of sialyl donors 1 and 2 at different concentrations. Supporting Information Supporting Information File 3: Copies of NMR spectra for all new compounds, single crystal X-ray analysis
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Published 31 Jan 2024

Using the phospha-Michael reaction for making phosphonium phenolate zwitterions

  • Matthias R. Steiner,
  • Max Schmallegger,
  • Larissa Donner,
  • Johann A. Hlina,
  • Christoph Marschner,
  • Judith Baumgartner and
  • Christian Slugovc

Beilstein J. Org. Chem. 2024, 20, 41–51, doi:10.3762/bjoc.20.6

Graphical Abstract
  • modular synthesis of stable phosphonium phenolate zwitterions bearing additional functional groups. The bonding situation in the zwitterions was studied by NMR and UV–vis spectroscopies and single-crystal X-ray analysis of selected representatives. The zwitterions exhibit negative solvatochromism and
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Published 10 Jan 2024

Biphenylene-containing polycyclic conjugated compounds

  • Cagatay Dengiz

Beilstein J. Org. Chem. 2023, 19, 1895–1911, doi:10.3762/bjoc.19.141

Graphical Abstract
  • and iPrOH, resulting in the formation of compound 37 in 49% yield. In the final step, Ir-catalyzed cycloaddition reaction with diphenylacetylene (tolane) led to PAH 38 in 47% yield. According to the X-ray analysis results, it is evident that the structure of compound 38 is far from planarity, and the
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Published 13 Dec 2023

Synthesis of 7-azabicyclo[4.3.1]decane ring systems from tricarbonyl(tropone)iron via intramolecular Heck reactions

  • Aaron H. Shoemaker,
  • Elizabeth A. Foker,
  • Elena P. Uttaro,
  • Sarah K. Beitel and
  • Daniel R. Griffith

Beilstein J. Org. Chem. 2023, 19, 1615–1619, doi:10.3762/bjoc.19.118

Graphical Abstract
  • best among those screened, yields remained modest (44%). X-ray analysis provided confirmation of the structure of bicycle 8 (CCDC No. 2263675). While searching for methods to improve the yield of our desired azabicycle, we came across the observation of Andrade and Kokkonda that vinylic halides with
  • (Colby College) and Prof. Bruce Foxman (Brandeis University) for X-ray analysis of compound 8. High-resolution mass spectra were obtained at the Mass Spectrometry Lab at the University of Illinois. Funding We thank the donors of the American Chemical Society Petroleum Research Fund (Grant No. 59202-UNI1
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Published 23 Oct 2023

Cyclization of 1-aryl-4,4,4-trichlorobut-2-en-1-ones into 3-trichloromethylindan-1-ones in triflic acid

  • Vladislav A. Sokolov,
  • Andrei A. Golushko,
  • Irina A. Boyarskaya and
  • Aleksander V. Vasilyev

Beilstein J. Org. Chem. 2023, 19, 1460–1470, doi:10.3762/bjoc.19.105

Graphical Abstract
  • , exact structures of compounds 1g,h,s,t,v were confirmed by X-ray analysis (see Supporting Information File 1). The hydroxy ketones 1 were used as precursors for the synthesis of 1-aryl-4,4,4-trichlorobut-2-en-1-ones (CCl3-enones) 2 by dehydration of compounds 1 with p-toluenesulfonic acid monohydrate at
  • by X-ray analysis (see Supporting Information File 1). Both, hydroxy ketone 1 and the corresponding enone 2, can be converted into the same indanone 3 in comparable yields; see pairs of reactions for 1a and 2a (indanone 3a), 1d and 2d (indanone 3d), 1i and 3i (indanone 3i), and 1n and 3n (indanone 3n
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Published 27 Sep 2023

Application of N-heterocyclic carbene–Cu(I) complexes as catalysts in organic synthesis: a review

  • Nosheen Beig,
  • Varsha Goyal and
  • Raj K. Bansal

Beilstein J. Org. Chem. 2023, 19, 1408–1442, doi:10.3762/bjoc.19.102

Graphical Abstract
  • , Cazin and co-workers reported the synthesis of Cu(I) complexes 61, 63, and 65 of the so-called ‘abnormal’ NHCs (Scheme 21) [35]. Thus, the conventional heating method as well as microwave irradiation methods were employed. The structures of the synthesized complexes were confirmed by X-ray analysis
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Published 20 Sep 2023

Photoredox catalysis harvesting multiple photon or electrochemical energies

  • Mattia Lepori,
  • Simon Schmid and
  • Joshua P. Barham

Beilstein J. Org. Chem. 2023, 19, 1055–1145, doi:10.3762/bjoc.19.81

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Published 28 Jul 2023

CO2 complexation with cyclodextrins

  • Cecilie Høgfeldt Jessen,
  • Jesper Bendix,
  • Theis Brock Nannestad,
  • Heloisa Bordallo,
  • Martin Jæger Pedersen,
  • Christian Marcus Pedersen and
  • Mikael Bols

Beilstein J. Org. Chem. 2023, 19, 1021–1027, doi:10.3762/bjoc.19.78

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  • , placed in an autoclave and pressurized with CO2 gas (pressure 6–20 bar) at 25 °C for 1–17 days. The resulting crystals were collected and filtered by suction filtration. The crystals were left to dry in a desiccator at normal pressure over CaCl2. X-ray analysis. The x-ray crystallographic studies were
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Published 17 Jul 2023

Synthesis of tetrahydrofuro[3,2-c]pyridines via Pictet–Spengler reaction

  • Elena Y. Mendogralo and
  • Maxim G. Uchuskin

Beilstein J. Org. Chem. 2023, 19, 991–997, doi:10.3762/bjoc.19.74

Graphical Abstract
  • : Crystallographic information file for compound 4a. Acknowledgements The authors are grateful to Dr. Maksim V. Dmitriev (Perm State University) for performing the X-ray analysis. Funding We thank the Russian Science Foundation (grant 21-73-10063) for support of this work.
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Published 30 Jun 2023

First synthesis of acylated nitrocyclopropanes

  • Kento Iwai,
  • Rikiya Kamidate,
  • Khimiya Wada,
  • Haruyasu Asahara and
  • Nagatoshi Nishiwaki

Beilstein J. Org. Chem. 2023, 19, 892–900, doi:10.3762/bjoc.19.67

Graphical Abstract
  • other adducts 4. Supporting Information Supporting Information File 80: Spectral data for 1, 4, 8, 10, 13 and NMR charts (1H and 13C NMR), and information of X-ray analysis for 10. Supporting Information File 81: Crystallographic information file for compound 10. Supporting Information File 82
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Published 21 Jun 2023

Bromination of endo-7-norbornene derivatives revisited: failure of a computational NMR method in elucidating the configuration of an organic structure

  • Demet Demirci Gültekin,
  • Arif Daştan,
  • Yavuz Taşkesenligil,
  • Cavit Kazaz,
  • Yunus Zorlu and
  • Metin Balci

Beilstein J. Org. Chem. 2023, 19, 764–770, doi:10.3762/bjoc.19.56

Graphical Abstract
  • irrefutably by X-ray crystallography, which would provide the ultimate structural confirmation. Toward that end, we resynthesized the molecule 6, isolated a sample and subjected it to single crystal X-ray analysis, which provided the ultimate final piece of evidence (Figure 8). Additional crystallographic
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Published 02 Jun 2023
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