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Search for "protonation" in Full Text gives 461 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Cu–Bpin-mediated dimerization of 4,4-dichloro-2-butenoic acid derivatives enables the synthesis of densely functionalized cyclopropanes

  • Patricia Gómez-Roibás,
  • Andrea Chaves-Pouso and
  • Martín Fañanás-Mastral

Beilstein J. Org. Chem. 2025, 21, 877–883, doi:10.3762/bjoc.21.71

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  • reaction in the presence of MeOH in order to trap the potential copper intermediate by protonation. When 2 equiv of MeOH were used, we still obtained the dimerization product 2. Nevertheless, when a catalytic amount of base was used, we only observed the formation of β-borylation product 12 (Scheme 3b
  • . Finally, the new enolate E evolves through intramolecular proton abstraction and elimination of boryllithium [20][21]. The formation of side product 3 observed when dichloromethane was used as a solvent could be explained by protonation of intermediate A, followed by transmetalation of the resulting
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Published 05 May 2025

4-(1-Methylamino)ethylidene-1,5-disubstituted pyrrolidine-2,3-diones: synthesis, anti-inflammatory effect and in silico approaches

  • Nguyen Tran Nguyen,
  • Vo Viet Dai,
  • Luc Van Meervelt,
  • Do Thi Thao and
  • Nguyen Minh Thong

Beilstein J. Org. Chem. 2025, 21, 817–829, doi:10.3762/bjoc.21.65

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  • using the pkCSM web server [28]. Docking molecular simulation: The structure of nitric oxide synthase (iNOS) protein (PDB ID: 3E7G) [45] was obtained from the Protein Data Bank. Protonation of the protein was carried out using the Protonate 3D tool in MOE to assign correct protonation states at pH 7.4
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Published 24 Apr 2025

Synthesis of N-acetyl diazocine derivatives via cross-coupling reaction

  • Thomas Brandt,
  • Pascal Lentes,
  • Jeremy Rudtke,
  • Michael Hösgen,
  • Christian Näther and
  • Rainer Herges

Beilstein J. Org. Chem. 2025, 21, 490–499, doi:10.3762/bjoc.21.36

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  • pH 7.4 compared to 41% in acetonitrile, while in acidic aqueous media a PSS of 62% E for the Z→E photoisomerization was observed. This is due to the complete protonation of the amino group converting it to an electron-deficient substituent. The thermal half-lives of 13 and 21 increase by a factor of
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Published 04 Mar 2025

Red light excitation: illuminating photocatalysis in a new spectrum

  • Lucas Fortier,
  • Corentin Lefebvre and
  • Norbert Hoffmann

Beilstein J. Org. Chem. 2025, 21, 296–326, doi:10.3762/bjoc.21.22

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Published 07 Feb 2025

Dioxazolones as electrophilic amide sources in copper-catalyzed and -mediated transformations

  • Seungmin Lee,
  • Minsuk Kim,
  • Hyewon Han and
  • Jongwoo Son

Beilstein J. Org. Chem. 2025, 21, 200–216, doi:10.3762/bjoc.21.12

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  • the targeted amidated product upon protonation, while simultaneously regenerating the active copper hydride species. 2.2 Hydroamidation of alkynes In 2022, Sato and co-workers introduced a copper-catalyzed hydroamidation of alkynes 25 using dioxazolones 24 as amide sources (Scheme 9) [99]. A
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Published 22 Jan 2025

Cu(OTf)2-catalyzed multicomponent reactions

  • Sara Colombo,
  • Camilla Loro,
  • Egle M. Beccalli,
  • Gianluigi Broggini and
  • Marta Papis

Beilstein J. Org. Chem. 2025, 21, 122–145, doi:10.3762/bjoc.21.7

Graphical Abstract
  • involves a Friedel–Crafts alkylation of the arene followed by hydroamination (Scheme 6) [5]. The mechanism plausibly starts with the in situ formation of triflic acid from Cu(OTf)2 which leads to protonation of the oxygen atom of the alcohol with generation of the activated allyl alcohol. This latter gives
  • the allyl carbenium ion VI through the loss of a molecule of water, then undergoes a Friedel–Crafts alkylation by attack of the aromatic partner. The outcome of the reaction proceeds through a Markovnikov protonation of the allylated arene VII by triflic acid, which generates the carbocation
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Published 14 Jan 2025

Recent advances in organocatalytic atroposelective reactions

  • Henrich Szabados and
  • Radovan Šebesta

Beilstein J. Org. Chem. 2025, 21, 55–121, doi:10.3762/bjoc.21.6

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  • acylazolium intermediate Int-16 followed by E-selective protonation of Int-17 (Scheme 9). NHC-catalysis also proved useful in the atroposelective construction of triaryl derivatives with two stereogenic axes. Wei, Du, and co-workers developed a synthesis of 1,2-diaxially chiral triarylpyranones 29 via an NHC
  • between the ketomalonate and organocatalyst Int-68 were shown as the pivotal interaction that formed the chiral pocket for the induction of chirality. Nucleophilic addition followed by rearomatization of the pyrrole ring and protonation of the oxygen forms the axially chiral arylpyrrole 237. The
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Published 09 Jan 2025

Giese-type alkylation of dehydroalanine derivatives via silane-mediated alkyl bromide activation

  • Perry van der Heide,
  • Michele Retini,
  • Fabiola Fanini,
  • Giovanni Piersanti,
  • Francesco Secci,
  • Daniele Mazzarella,
  • Timothy Noël and
  • Alberto Luridiana

Beilstein J. Org. Chem. 2024, 20, 3274–3280, doi:10.3762/bjoc.20.271

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  • pathway for the functionalization of an electron-deficient olefin is the Giese reaction (Figure 1) [6][7]. This reaction involves the hydroalkylation of the olefin via radical addition (RA), followed by either hydrogen-atom transfer (HAT) or single-electron transfer (SET) and protonation. Traditionally
  • slight increase in chemical yield. Giese reaction: Radical addition on olefins with an electron-withdrawing group (EWG) followed by a HAT or SET and protonation; halogen-atom transfer: (a) tin-mediated XAT, (b) XAT initiated by a photocatalyst (PC) and mediated by boranes (B), silanes (Si) or alkylamines
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Published 17 Dec 2024

Non-covalent organocatalyzed enantioselective cyclization reactions of α,β-unsaturated imines

  • Sergio Torres-Oya and
  • Mercedes Zurro

Beilstein J. Org. Chem. 2024, 20, 3221–3255, doi:10.3762/bjoc.20.268

Graphical Abstract
  • azlactones through H-bond interactions with the squaramide moiety. The activated complex undergoes a [4 + 2] cyclization, through the Si-face attack of the enolate to the 1-azadiene leading to intermediate A which undergoes tautomerization and protonation to yield the chiral tricyclic derivative 16. To
  • azadiene in a stepwise mechanism: firstly, the vinylogous Michael addition of the dienolate to the double bond of the α,β-unsaturated N-sulfonylimine occurs in a stereoselective fashion. Subsequently, cyclization due to an intramolecular aza-Michael reaction and protonation leads to the enantioenriched
  • carbanion to the isocyanate group forming intermediate B which undergoes protonation yielding the product. The authors attempted to perform different reductions of the products without any success. However, they performed a gram scale version of the transformation obtaining the product in comparable yields
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Published 10 Dec 2024

Advances in the use of metal-free tetrapyrrolic macrocycles as catalysts

  • Mandeep K. Chahal

Beilstein J. Org. Chem. 2024, 20, 3085–3112, doi:10.3762/bjoc.20.257

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  • [48]. Therefore, most of the work involving metal-free porphyrins is limited to investigations on N–H tautomerization and protonation–deprotonation studies [49][50][51][52]. However, there are several chemical tools to convert the planar geometry of porphyrins to nonplanar, such as functionalization
  • at β- and meso-positions, N-alkylation, arylation or protonation, interruption of the conjugated system, reduction/oxidation of the macrocycle and/or strapping of the macrocycle via covalent linkage of the meso- or β-pyrrole positions [22][53][54][55][56][57]. These alternations can significantly
  • porphyrin radical anion. Ultimately, protonation of intermediate E led to the final product. Formation of intermediates, such as enamine A and cation radical B, was confirmed using techniques like ESIMS, 1H NMR, and EPR, Stern–Volmer quenching experiments, respectively. All these mechanistic studies
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Published 27 Nov 2024

Tunable full-color dual-state (solution and solid) emission of push–pull molecules containing the 1-pyrindane moiety

  • Anastasia I. Ershova,
  • Sergey V. Fedoseev,
  • Konstantin V. Lipin,
  • Mikhail Yu. Ievlev,
  • Oleg E. Nasakin and
  • Oleg V. Ershov

Beilstein J. Org. Chem. 2024, 20, 3016–3025, doi:10.3762/bjoc.20.251

Graphical Abstract
  • dimethylamino group, were studied (Table 1 and Figure 3). It was found that in most solvents, compound 1i was characterized by a single pronounced absorption maximum in the range of 503–525 nm that red-shifted upon increasing the solvent polarity. In formic acid, due to the protonation of the dimethylamino
  • group, a strong blue shift occurred down to 394 nm. The only exception was a solution of 1i in acetic acid, where two peaks were observed. Apparently, the weaker acetic acid caused just a partial protonation of the amino group, and the equilibrium shown in Scheme 2 was observed. This was evidenced by
  • 511 nm), in the region of solvents with medium polarity. Protonation of the dimethylamino group was additionally confirmed by titration of pyrindane 1i in toluene using trifluoroacetic acid (see Figure S2, Supporting Information File 1). According to the data obtained, an increasing amount of acid
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Published 19 Nov 2024

Advances in radical peroxidation with hydroperoxides

  • Oleg V. Bityukov,
  • Pavel Yu. Serdyuchenko,
  • Andrey S. Kirillov,
  • Gennady I. Nikishin,
  • Vera A. Vil’ and
  • Alexander O. Terent’ev

Beilstein J. Org. Chem. 2024, 20, 2959–3006, doi:10.3762/bjoc.20.249

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Published 18 Nov 2024

Synthesis of tricarbonylated propargylamine and conversion to 2,5-disubstituted oxazole-4-carboxylates

  • Kento Iwai,
  • Akari Hikasa,
  • Kotaro Yoshioka,
  • Shinki Tani,
  • Kazuto Umezu and
  • Nagatoshi Nishiwaki

Beilstein J. Org. Chem. 2024, 20, 2827–2833, doi:10.3762/bjoc.20.238

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  • decarboxylation accompanied by aromatization of the oxazole ring occurred during this process. Thus, protonation occurs, leading to oxazole 5 when the reaction mixture is warmed in the presence of large amounts of proton sources such as acetic acid or deuterium oxide. Although Nagao et al. proposed another
  • phenacyl group, yielding 9 without any detectable cyclization product (Scheme 4). This hydration process is thought to proceed via two paths. The reaction is initiated by the protonation of the ethynyl group to generate the vinyl cation intermediate 10. Product 9 is directly formed by the attack of a water
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Published 06 Nov 2024

Mechanochemical difluoromethylations of ketones

  • Jinbo Ke,
  • Pit van Bonn and
  • Carsten Bolm

Beilstein J. Org. Chem. 2024, 20, 2799–2805, doi:10.3762/bjoc.20.235

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  • with the generation of difluorocarbene from TMSCF2Br and KFHF. This is followed by a nucleophilic attack of the oxygen atom of ketone 1 on the difluorocarbene. Subsequently, a protonation–deprotonation sequence occurs, which can either be intermolecular, involving a molecule of HF, or intramolecular
  • isolating the low-boiling non-polar products. Mechanistic studies suggested that in situ-generated difluorocarbene reacts with the ketone oxygen, followed by intermolecular protonation/deprotonation. Although the process has still synthetic limitations, also acyclic ketones can now be converted into
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Published 04 Nov 2024

C–C Coupling in sterically demanding porphyrin environments

  • Liam Cribbin,
  • Brendan Twamley,
  • Nicolae Buga,
  • John E. O’ Brien,
  • Raphael Bühler,
  • Roland A. Fischer and
  • Mathias O. Senge

Beilstein J. Org. Chem. 2024, 20, 2784–2798, doi:10.3762/bjoc.20.234

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  • alternatively by core protonation, whereby all four-core nitrogen atoms are protonated to produce the diacid [12][13]; these diacids can tilt the pyrrole rings 20–40° [14] from the mean-porphyrin plane. Norvaiša et al. showed that a saddle-shaped porphyrin as a dodecasubstituted diacid can bind anions via two
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Published 04 Nov 2024

Synthesis of benzo[f]quinazoline-1,3(2H,4H)-diones

  • Ruben Manuel Figueira de Abreu,
  • Peter Ehlers and
  • Peter Langer

Beilstein J. Org. Chem. 2024, 20, 2708–2719, doi:10.3762/bjoc.20.228

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  • when located at position 5 of the uracil ring, which might be due to the protonation of the amine under the employed reaction conditions, making the aryl ring less feasible for the SEAr reaction (Scheme 4b). The same effects may explain the cyclisation of 4f to 5f, while 4c is not converted to the
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Published 28 Oct 2024

A review of recent advances in electrochemical and photoelectrochemical late-stage functionalization classified by anodic oxidation, cathodic reduction, and paired electrolysis

  • Nian Li,
  • Ruzal Sitdikov,
  • Ajit Prabhakar Kale,
  • Joost Steverlynck,
  • Bo Li and
  • Magnus Rueping

Beilstein J. Org. Chem. 2024, 20, 2500–2566, doi:10.3762/bjoc.20.214

Graphical Abstract
  • corresponding 1,2,4-triazolium tetrafluoroborates under electrochemical conditions [29]. The reaction is conducted with a stoichiometric amount of HBF4, which converts the substrate to the corresponding cationic intermediate via a protonation, eliminating the need for an additional supporting electrolyte. The
  • , due to the protonation of triticonazole, the participation of the protonated form in the overall reaction mechanism is also considered in pathway B (Scheme 21). Benzo[c][1,2]oxazines are useful scaffolds for the synthesis of natural products. In 2021, the Han group developed the electrochemical [4 + 2
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Published 09 Oct 2024

Facile preparation of fluorine-containing 2,3-epoxypropanoates and their epoxy ring-opening reactions with various nucleophiles

  • Yutaro Miyashita,
  • Sae Someya,
  • Tomoko Kawasaki-Takasuka,
  • Tomohiro Agou and
  • Takashi Yamazaki

Beilstein J. Org. Chem. 2024, 20, 2421–2433, doi:10.3762/bjoc.20.206

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  • from the initially formed anti,syn-7a and -7b, followed by the re-protonation by the sterically bulky [H·amine]+ from the less congested top side. These results prompted us to further investigate the ring opening of 2b by other nucleophiles with active hydrogen whose results are summarized in Scheme 5
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Published 25 Sep 2024

Efficient one-step synthesis of diarylacetic acids by electrochemical direct carboxylation of diarylmethanol compounds in DMSO

  • Hisanori Senboku and
  • Mizuki Hayama

Beilstein J. Org. Chem. 2024, 20, 2392–2400, doi:10.3762/bjoc.20.203

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  •  1, entry 7). After tuning of the electricity, electrochemical carboxylation of 1a under the reaction conditions shown in Table 1, entry 8 gave 2a in 79% isolated yield. In all cases, diphenylmethane, probably produced by protonation of the generated benzyl anion species, was detected as a byproduct
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Published 20 Sep 2024

Asymmetric organocatalytic synthesis of chiral homoallylic amines

  • Nikolay S. Kondratyev and
  • Andrei V. Malkov

Beilstein J. Org. Chem. 2024, 20, 2349–2377, doi:10.3762/bjoc.20.201

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  • active catalytic species in COBI-catalysed allylations, chemical equilibria in a solution containing catalyst 72, triflic acid, and aldimine 73 were investigated by low-temperature NMR spectroscopy (Scheme 15). Protonation of oxazaborolidine 70 with triflic acid resulted in an 8.3:1 mixture of 71 and 72
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Published 16 Sep 2024

Selective hydrolysis of α-oxo ketene N,S-acetals in water: switchable aqueous synthesis of β-keto thioesters and β-keto amides

  • Haifeng Yu,
  • Wanting Zhang,
  • Xuejing Cui,
  • Zida Liu,
  • Xifu Zhang and
  • Xiaobo Zhao

Beilstein J. Org. Chem. 2024, 20, 2225–2233, doi:10.3762/bjoc.20.190

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  • above and on literature precedents [40][41], a plausible mechanistic pathway for the formation of 2 and 3 is shown in Scheme 5 (with the reaction of 1a as an example). In the presence of DBSA, the protonation of 1a results in the carbocation intermediate I. Then, the nucleophilic attack of H2O at the
  • carbocation of I produces intermediate II, which converts into intermediate III through a deprotonation–protonation process. Finally, the elimination of PhNH2 from intermediate III occurs to afford the desired product 2a. In the presence of NaOH, the Michael addition between 1a and base initially occurs to
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Published 03 Sep 2024

Factors influencing the performance of organocatalysts immobilised on solid supports: A review

  • Zsuzsanna Fehér,
  • Dóra Richter,
  • Gyula Dargó and
  • József Kupai

Beilstein J. Org. Chem. 2024, 20, 2129–2142, doi:10.3762/bjoc.20.183

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  • by azodicarboxylates in a homogeneous phase, as noted by Takemoto [126], it was suggested that this interaction would be significantly impeded by the polymer backbone. Alternatively, it was proposed that this degradation could be due to protonation of the basic tertiary amine unit. It was found that
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Published 26 Aug 2024

Understanding X-ray-induced isomerisation in photoswitchable surfactant assemblies

  • Beatrice E. Jones,
  • Camille Blayo,
  • Jake L. Greenfield,
  • Matthew J. Fuchter,
  • Nathan Cowieson and
  • Rachel C. Evans

Beilstein J. Org. Chem. 2024, 20, 2005–2015, doi:10.3762/bjoc.20.176

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  • process that generates a wide variety of primary species, including e−, HO•, H•, HO2•, H+, OH−, H2O2 and H2 [36]. For Azo photoswitches, the formation of H+ species, i.e., the acidification effect, can catalyse the Z–E isomerisation reaction. This is due to protonation of one of the nitrogen atoms in the
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Published 14 Aug 2024

Novel oxidative routes to N-arylpyridoindazolium salts

  • Oleg A. Levitskiy,
  • Yuri K. Grishin and
  • Tatiana V. Magdesieva

Beilstein J. Org. Chem. 2024, 20, 1906–1913, doi:10.3762/bjoc.20.166

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  • diaryldihydrophenazine was increased (10%). Thus, protonation completely suppressed the intramolecular cyclization route. Heterocyclic salts S1–S3 were obtained as amorphous solids, soluble in polar solvents (acetonitrile, DMF, acetone) and chlorinated hydrocarbons (CHCl3, CH2Cl2). The structure of new N
  • corresponding to the acidic protons in the spectra of the salts excluded protonation of the pyridyl or amino groups. The downfield shift of the signals of both the N-aryl ring (for 0.5–1 ppm) and the pyridyl moiety (for more than 1 ppm) confirmed the positive charge delocalization over both N atoms and the
  • . Our experiments with the acid additives (see above) showed that protonation of the pyridyl group suppresses the pyridoindazolium salt formation. Voltammetry testing also showed that 2,6-lutidine addition facilitates oxidation of the amine (Figure 2); the peak potential was of 100 mV shifted toward
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Published 07 Aug 2024

The Groebke–Blackburn–Bienaymé reaction in its maturity: innovation and improvements since its 21st birthday (2019–2023)

  • Cristina Martini,
  • Muhammad Idham Darussalam Mardjan and
  • Andrea Basso

Beilstein J. Org. Chem. 2024, 20, 1839–1879, doi:10.3762/bjoc.20.162

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Published 01 Aug 2024
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