Transition-metal-free decarbonylation–oxidation of 3-arylbenzofuran-2(3H)-ones: access to 2-hydroxybenzophenones

• Bhaskar B. Dhotare,
• Seema V. Kanojia,
• Chahna K. Sakhiya,
• Amey Wadawale and
• Dibakar Goswami

Beilstein J. Org. Chem. 2024, 20, 2655–2667, doi:10.3762/bjoc.20.223

• vacuum, and the residue was purified using silica-gel column chromatography. Compounds 3aa [21], 3ba [21], 3ea [21], 3eb [21], 3fa [21], 3fb [22], 3ga [21], and 3ja [21] were synthesized using the similar method as reported previously by us. General procedure for the synthesis of 2-hydroxybenzophenones

The scent gland composition of the Mangshan pit viper, Protobothrops mangshanensis

• Jonas Holste,
• Paul Weldon,
• Donald Boyer and
• Stefan Schulz

Beilstein J. Org. Chem. 2024, 20, 2644–2654, doi:10.3762/bjoc.20.222

• analysis [8]. Silver nitrate column chromatography: Silver nitrate column chromatography was carried out as described [45]. An aq solution of silver nitrate (5.5 g) in H2O (30 mL) was added to silica gel (50 g). Water was added to barely cover the silica gel. The silica was stirred with a glass rod and

• shaken for 15 min and then placed in an oven at 100 °C until the silica gel was completely dried. The impregnated silica gel was stored in the dark until use. Syntheses 1-(1-Propen-1-yl)piperidine (2): In a manner analogous to [27], potassium carbonate (2 g, 15 mmol), piperidine (10 mL, 0.1 mol), and

Applications of microscopy and small angle scattering techniques for the characterisation of supramolecular gels

• Connor R. M. MacDonald and
• Emily R. Draper

Beilstein J. Org. Chem. 2024, 20, 2608–2634, doi:10.3762/bjoc.20.220

• gives rise to difficulties in understanding and predicting gel structure and properties [2]. In order to understand the supramolecular structure, a robust characterisation regime is required. A comprehensive work edited by Weiss and Térech discussed in detail the plethora of chemical systems

• techniques Imaging is the most widely used and accessible technique for characterising these gel materials. Researchers are looking for the presence of fibrous structures, coils, entanglements, spherulites and other such features that can give them some insight into how the gel is formed in the network via

• different length scales can be probed to identify how the individual fibres form and then entangle to form the gel network. In addition to showing the shape of the self-assembled structures, with the aid of software tools such as ImageJ [13], features such as the fibre width, fibre length, and pore sizes

Synthesis and cytotoxicity studies of novel N-arylbenzo[h]quinazolin-2-amines

• Battini Veeraiah,
• Kishore Ramineni,
• Dabbugoddu Brahmaiah,
• Nangunoori Sampath Kumar,
• Hélène Solhi,
• Rémy Le Guevel,
• Chada Raji Reddy,
• Frédéric Justaud and
• René Grée

Beilstein J. Org. Chem. 2024, 20, 2592–2598, doi:10.3762/bjoc.20.218

• traces of residual moisture. Reactions were monitored by thin-layer chromatography (TLC) using E. Merck silica gel plates and components were visualized by illumination with short wavelength UV light and/or staining (ninhydrin or basic KMnO4). All aldehydes were distilled right before use. All aryl

• better accuracy on small coupling constants, resolution in 1H NMR was enhanced using Traficante. All compounds were purified by flash column chromatography on silca gel unless otherwise noted. Melting points were obtained using an Electrothermal IA9200 series digital apparatus with thin-wall glass tube

Transition-metal-free synthesis of arylboronates via thermal generation of aryl radicals from triarylbismuthines in air

• Yuki Yamamoto,
• Yuki Konakazawa,
• Kohsuke Fujiwara and
• Akiya Ogawa

Beilstein J. Org. Chem. 2024, 20, 2577–2584, doi:10.3762/bjoc.20.216

• somewhat difficult due to strong adsorption or decomposition on silica gel. Since some arylboronates are somewhat unstable, it is desirable to synthesize such compounds and then use them in a one-pot manner for the following reactions without isolation. To gain insight into the reaction pathways, several

Anion-dependent ion-pairing assemblies of triazatriangulenium cation that interferes with stacking structures

• Yohei Haketa,
• Takuma Matsuda and
• Hiromitsu Maeda

Beilstein J. Org. Chem. 2024, 20, 2567–2576, doi:10.3762/bjoc.20.215

• sheets coated with silica gel 60 (Merck 5554). Column chromatography was performed on Wakogel C-300. Preparation of ion pairs 4,8,12-Tris(2,6-dimethylphenyl)-4,8,12-triazatriangulenium as a BF4− ion pair, 2+-BF4−. According to the literature procedure [26], to a Schlenk tube were added 2,6

• gel column chromatography (Wakogel C-300, eluent: MeOH/CH2Cl2 with an increment of MeOH). The residue was chromatographed over ion-exchanged resin (Amberlite IRA402BL, eluent: MeOH/CH2Cl2) and solvents were removed by evaporation. Then, to a MeOH solution (150 mL) of the solid was added AgBF4 (269 mg

• , 1.38 mmol), and the reaction mixture was stirred at rt for 10 min, followed by filtration, and evaporation to dryness. The residue was purified by silica gel column chromatography (Wakogel C-300; eluent: MeOH/AcOEt/CH2Cl2 1:2:8) and was recrystallized from CH2Cl2/n-hexane to afford 2+-BF4− (143 mg

Phenylseleno trifluoromethoxylation of alkenes

• Clément Delobel,
• Armen Panossian,
• Gilles Hanquet,
• Frédéric R. Leroux,
• Fabien Toulgoat and
• Thierry Billard

Beilstein J. Org. Chem. 2024, 20, 2434–2441, doi:10.3762/bjoc.20.207

• derivative 2k, and the estrone derivative 2l were also successfully bis-functionalized. Some products appeared to be sensitive during purification by chromatography on silica gel. Suspecting acid sensitivity, compound 2a was treated with trifluoroacetic acid to confirm this hypothesis (Scheme 3). The product

Facile preparation of fluorine-containing 2,3-epoxypropanoates and their epoxy ring-opening reactions with various nucleophiles

• Yutaro Miyashita,
• Sae Someya,
• Tomoko Kawasaki-Takasuka,
• Tomohiro Agou and
• Takashi Yamazaki

Beilstein J. Org. Chem. 2024, 20, 2421–2433, doi:10.3762/bjoc.20.206

• in 60% yield. GP-1B (by use of NaClO·5H2O): To a solution of compound 1b [42] (0.2302 g, 1.00 mmol) in 3.0 mL of CH3CN was added NaClO·5H2O (0.3290 g, 2.00 mmol) at 0 °C, and the solution was stirred for 6 h at the same temperature. After the same workup process and purification with silica gel

• in 79% yield after silica gel column chromatography using Hex/AcOEt 6:1 as an eluent. Rf 0.51 (Hex/AcOEt 4:1); 1H NMR (300.40 MHz, CDCl3) δ 0.88 (t, J = 6.9 Hz, 3H), 1.26 (brs, 14H), 1.60 (quint, J = 6.9 Hz, 2H), 2.49 (t, J = 7.5 Hz, 2H), 2.74 (dd, J = 3.6, 17.7 Hz, 1H), 2.83 (dd, J = 9.0, 17.7 Hz

Improved deconvolution of natural products’ protein targets using diagnostic ions from chemical proteomics linkers

• Andreas Wiest and
• Pavel Kielkowski

Beilstein J. Org. Chem. 2024, 20, 2323–2341, doi:10.3762/bjoc.20.199

• source of information steering the site identifications and increasing the confidence in those identifications in MS-based chemical proteomics. In-gel chemical proteomics The detection of the probe–protein conjugate(s) is based on the enhanced signal stemming from the probe–protein conjugate above the

• background from total protein present in the lysate. The detection can be done in several different ways. To obtain an overview of how many proteins are labeled in total and what is the intensity of the labeling, the probe–protein–tag conjugates are separated on sodium dodecyl sulfate polyacrylamide gel (SDS

• -PAGE) and visualized by in-gel fluorescence scanning (Figure 6A). In this approach the tag is a suitable fluorophore. Previously, during an introduction period of a chemical proteomics workflow of activity-based protein profiling (ABPP), the resulting fluorescent bands might be simply cut out from the

Synthesis and reactivity of the di(9-anthryl)methyl radical

• Tomohiko Nishiuchi,
• Kazuma Takahashi,
• Yuta Makihara and
• Takashi Kubo

Beilstein J. Org. Chem. 2024, 20, 2254–2260, doi:10.3762/bjoc.20.193

• product. After silica gel column purification, the isolated yield of these compounds were 64% and 13%, respectively. Additionally, a radical species, showing an ESR peak pattern distinct from that of the DAntM radical and mainly splitting into five peaks with g = 2.0037, was confirmed (Figure 4, Figure S7

Cell-free protein synthesis with technical additives – expanding the parameter space of in vitro gene expression

• Tabea Bartsch,
• Stephan Lütz and
• Katrin Rosenthal

Beilstein J. Org. Chem. 2024, 20, 2242–2253, doi:10.3762/bjoc.20.192

• [66]. Purity of the in vivo produced proteins was checked with sodium dodecyl sulfate polyacrylamide gel-electrophoresis (SDS-PAGE) [67]. Impurities were quantified with ImageJ [68] and measured protein concentrations corrected by the results to gain concentrations of pure sfGFP and thscGAS-sfGFP

Selective hydrolysis of α-oxo ketene N,S-acetals in water: switchable aqueous synthesis of β-keto thioesters and β-keto amides

• Haifeng Yu,
• Wanting Zhang,
• Xuejing Cui,
• Zida Liu,
• Xifu Zhang and
• Xiaobo Zhao

Beilstein J. Org. Chem. 2024, 20, 2225–2233, doi:10.3762/bjoc.20.190

• silica gel 60 F200) were analyzed under UV light (254 nm). Chromatographic purifications were performed on SDZF silica gel 160. The starting α-oxo ketene N,S-acetals 1 are known compounds [40][41] and easily prepared according to References [40][58]. Typical procedure for the preparation of β-keto

• value of the reaction mixture was adjusted to neutral using a saturated NaHCO3 solution, and the reaction mixture was extracted with CH2Cl2 (3 × 20 mL). The organic solution was dried with anhydrous Na2SO4, and the crude product was purified by column chromatography on 300–400 mesh silica gel (petroleum

• organic solution was dried with anhydrous Na2SO4, and the crude product was purified by column chromatography on 30–400 mesh silica gel (petroleum ether (60–90 °C)/ethyl acetate 20:1, v/v) to give 3a (53.8 mg, 90%). Synthesis of α-keto thioesters and β-keto amides. Synthesis of β-keto thioesters 2

Novel truxene-based dipyrromethanes (DPMs): synthesis, spectroscopic characterization and photophysical properties

• Shakeel Alvi and
• Rashid Ali

Beilstein J. Org. Chem. 2024, 20, 2163–2170, doi:10.3762/bjoc.20.186

• purified through silica-gel column chromatography. After successfully synthesizing these easy-to-make yet interesting molecules, they were fully characterized by means of the standard spectroscopic techniques (1H NMR, 13C NMR and HRMS). We are of the opinion that these truxene-based systems will be useful

• . Analytical thin-layer chromatography (TLC) was performed on aluminium plates coated with silica gel by using a suitable mixture of EtOAc and petroleum ether for development purpose. Column chromatography was performed by using silica gel (100–200 mesh) with an appropriate mixture of EtOAc and petroleum ether

• crude product was extracted with ethyl acetate. The combined organic layers were washed with water (2 × 100 mL), dried over anhydrous Na2SO4. After evaporation of the solvent the residue was passed through a silica gel (SiO2) to give the final product as a white powder (7.5 g, 95%). The 1H NMR spectrum

Factors influencing the performance of organocatalysts immobilised on solid supports: A review

• Zsuzsanna Fehér,
• Dóra Richter,
• Gyula Dargó and
• József Kupai

Beilstein J. Org. Chem. 2024, 20, 2129–2142, doi:10.3762/bjoc.20.183

• was studied and compared in the esterification of methanol or glycerol with oleic acid (1). It was observed that substrate conversion and product yield also depended on the particle morphology. Rope-type propylsulfonic SBA-15 mesoporous silica gel showed the highest catalytic activity in both studied

Efficacy of radical reactions of isocyanides with heteroatom radicals in organic synthesis

• Akiya Ogawa and
• Yuki Yamamoto

Beilstein J. Org. Chem. 2024, 20, 2114–2128, doi:10.3762/bjoc.20.182

• radical, which induces 5-exo cyclization. The following hydrogen abstraction, intramolecular ionic cyclization, and hydrolysis during chromatography on silica gel affords the cyclic amide in good yield. They further applied this radical cyclization reaction as a key step in the synthesis of (±)-α-kainic

Cage-like microstructures via sequential Ugi reactions in aqueous emulsions

• Rita S. Alqubelat,
• Yaroslava A. Menzorova and
• Maxim A. Mironov

Beilstein J. Org. Chem. 2024, 20, 2078–2083, doi:10.3762/bjoc.20.179

• principle, two possible mechanisms were considered: (1) Soft CMC/chitosan gel particles interacted with the surface and flattened to form discs. (2) When particles were deposited on the surface, they did not completely cover it, forming a network. In this work, we tested these hypotheses and found arguments

Multicomponent syntheses of pyrazoles via (3 + 2)-cyclocondensation and (3 + 2)-cycloaddition key steps

• Ignaz Betcke,
• Alissa C. Götzinger,
• Maryna M. Kornet and
• Thomas J. J. Müller

Beilstein J. Org. Chem. 2024, 20, 2024–2077, doi:10.3762/bjoc.20.178

• pyrazoline, which leads to increased yields. In addition to fully substituted pyrazoles, bispyrazoles can also be synthesized [97]. Other Lewis acid catalysts employed in this method include chloride-functionalized silica gel (SiO2Cl) [98] and Sc(OTf)3 [99]. Importantly, all reactions of this method are

Allostreptopyrroles A–E, β-alkylpyrrole derivatives from an actinomycete Allostreptomyces sp. RD068384

• Marwa Elsbaey,
• Naoya Oku,
• Mohamed S. A. Abdel-Mottaleb and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2024, 20, 1981–1987, doi:10.3762/bjoc.20.174

• fractionated on a silica gel column eluting with CHCl3/MeOH mixtures. Allostreptamide was obtained from the eluate with CHCl3/MeOH 2:1 [24]. HPLC-DAD analysis of a less polar fraction, eluted with CHCl3/MeOH 10:1, detected several peaks with characteristic UV absorptions, which were purified by ODS flash

• , and isolation Details on the supplier of Allostreptomyces sp. RD068384, fermentation, extraction, and fractionation are described in Supporting Information File 1. While a CHCl3/MeOH 2:1-eluting fraction by silica gel open column chromatography eventually yielded allostreptamide [24], a less polar

• CHCl3/MeOH 10:1 fraction contained compounds with characteristic UV absorption. This fraction, obtained as 395 mg of brown solid from 4 L culture in A-3M medium, was fractionated by octadecyldimethylsilyl (ODS) silica gel column chromatography with a gradient of MeCN/0.1% HCO2H solution (2:8, 3:7, 4:6

Regioselective alkylation of a versatile indazole: Electrophile scope and mechanistic insights from density functional theory calculations

• Pengcheng Lu,
• Luis Juarez,
• Paul A. Wiget,
• Weihe Zhang,
• Krishnan Raman and
• Pravin L. Kotian

Beilstein J. Org. Chem. 2024, 20, 1940–1954, doi:10.3762/bjoc.20.170

• moisture-sensitive reagents were performed under a nitrogen or argon atmosphere. Silica gel chromatography was performed using prepacked silica gel columns (RediSep® Rf, Teledyne ISCO). An aluminum block atop a hotplate with a thermocouple was used to heat reactions to the specified temperatures. NMR

A new platform for the synthesis of diketopyrrolopyrrole derivatives via nucleophilic aromatic substitution reactions

• Vitor A. S. Almodovar and
• Augusto C. Tomé

Beilstein J. Org. Chem. 2024, 20, 1933–1939, doi:10.3762/bjoc.20.169

• chromatography (TLC) was carried out on precoated sheets with silica gel (Merck 60, 0.2 mm thick). Preparative TLC was carried out on 20 cm × 20 cm glass plates precoated with a layer of silica gel 60 (0.5 mm thick) and activated in an oven at 100 °C for 12 h. Melting points were determined with a Büchi B-540

• and then it was diluted with CH2Cl2 and water. The organic layer was separated and washed with water and brine. The product was isolated by column chromatography on silica gel using CH2Cl2 as the eluent. Yield: 61%; mp: 278–280 °C; 1H NMR (300 MHz, CDCl3) δ (ppm) 7.62–7.66 (m, 4H), 7.47–7.52 (m, 4H

Electrochemical radical cation aza-Wacker cyclizations

• Sota Adachi and
• Yohei Okada

Beilstein J. Org. Chem. 2024, 20, 1900–1905, doi:10.3762/bjoc.20.165

• with stirring. The solution was diluted with water and extracted with dichloromethane. The combined organic layers were dried over Na2SO4, filtered, and concentrated in vacuo. Yields were determined by 1H NMR analysis using benzaldehyde as an internal standard (Table 1). Silica gel column

The Groebke–Blackburn–Bienaymé reaction in its maturity: innovation and improvements since its 21st birthday (2019–2023)

• Cristina Martini,
• Muhammad Idham Darussalam Mardjan and
• Andrea Basso

Beilstein J. Org. Chem. 2024, 20, 1839–1879, doi:10.3762/bjoc.20.162

Discovery of antimicrobial peptides clostrisin and cellulosin from Clostridium: insights into their structures, co-localized biosynthetic gene clusters, and antibiotic activity

• Moisés Alejandro Alejo Hernandez,
• Katia Pamela Villavicencio Sánchez,
• Rosendo Sánchez Morales,
• Karla Georgina Hernández-Magro Gil,
• David Silverio Moreno-Gutiérrez,
• Eddie Guillermo Sanchez-Rueda,
• Yanet Teresa-Cruz,
• Brian Choi,
• Armando Hernández Garcia,
• Alba Romero-Rodríguez,
• Oscar Juárez,
• Siseth Martínez-Caballero,
• Mario Figueroa and
• Corina-Diana Ceapă

Beilstein J. Org. Chem. 2024, 20, 1800–1816, doi:10.3762/bjoc.20.159

• domains [49]. As in the previous literature report, we could confirm that the precursor CloA2 could be cut by the non-native peptidase CloPt1, likely due to this domain's sequence and structure conservation. SDS-PAGE gel electrophoresis confirmed the expression of all proteins. Each of the LanM enzymes

• force microscopy The study employed atomic force microscopy (AFM) in air to observe the bacterial morphological changes on the surface of S. epidermidis triggered by the impact of lanthipeptides. The concentrations of peptides were estimated based on the SDS gel band intensity, and we expect there is

• ). Purifications were monitored through 20% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) [51]. For HPLC-LC analysis no native purification was performed, for each pellet of 500 mL liquid culture induction of clostrisin and cellulosin lanthipeptides. The cell pellet was resuspended with 10

Synthesis of polycyclic aromatic quinones by continuous flow electrochemical oxidation: anodic methoxylation of polycyclic aromatic phenols (PAPs)

• Hiwot M. Tiruye,
• Solon Economopoulos and
• Kåre B. Jørgensen

Beilstein J. Org. Chem. 2024, 20, 1746–1757, doi:10.3762/bjoc.20.153

• supporting electrolyte within a flow system [32]. Et4NOTs is highly soluble in these solvents and can easily be removed by filtration through a pad of silia gel. Initially, we did a short screening of available electrode materials on the oxidation of commercially available 2-naphthol (1a, Table 1) obtaining

• dimethoxylated quinones are somewhat labile but can be purified by rapid silica gel chromatography and stored for a few weeks. The controlled current and anhydrous conditions helped avoiding overoxidation. The substrates leading to p-quinones were more prone to overoxidation. The electrochemical oxidation of

New triazinephosphonate dopants for Nafion proton exchange membranes (PEM)

• Fátima C. Teixeira,
• António P. S. Teixeira and
• C. M. Rangel

Beilstein J. Org. Chem. 2024, 20, 1623–1634, doi:10.3762/bjoc.20.145

• (34%) of Nafion perfluorinated resin solution was purchased from Sigma-Aldrich. Purification of reaction products was done by column chromatography on silica gel (230–400 mesh) with the appropriate eluent mixture and using a positive pressure of nitrogen. Spectroscopic characterization The