Convenient alternative synthesis of the Malassezia-derived virulence factor malassezione and related compounds

• Karu Ramesh and
• Stephen L. Bearne

Beilstein J. Org. Chem. 2025, 21, 1730–1736, doi:10.3762/bjoc.21.135

• -protected malassezione, which upon deprotection yields malassezione in an overall yield of ca. 20%. This is an improvement over the preparation of the isonitrile followed by an Fe hydride initiated isonitrile–olefin intramolecular coupling reaction, which generated malassezione with an overall yield of ca

• [20], or, more recently, (iii) prepared via an Fe hydride initiated isonitrile–olefin intramolecular coupling reaction (Scheme 1A) [18]. The reported synthetic route relies on an initial 4-step preparation of the isonitrile precursor, which was accomplished in an overall yield of ca. 14%. The

• . 20% (4 steps) relative to an overall yield of ca. 5% via the preparation of the isonitrile followed by the Fe hydride initiated isonitrile–olefin intramolecular coupling reaction [18]. Protection of the indole nitrogens with the Boc group was preferable to the use of benzyl protecting groups since

Approaches to stereoselective 1,1'-glycosylation

• Daniele Zucchetta and
• Alla Zamyatina

Beilstein J. Org. Chem. 2025, 21, 1700–1718, doi:10.3762/bjoc.21.133

• sucrose derivatives in plants [79][80][81]. In this case, the carboxymethyl group in the 2-thioethyl fructofuranoside was locked by an intramolecular bridge formed by the TIPDS group to the C4–OH [1,4-O-(1,1,3,3-tetraisopropyldisiloxane-1,3-diyl) bridge], resulting in a β-directing fructofuranosyl donor

• well known for their strong 1,2-trans-stereodirecting effect [44][90][91]. On the other hand, the use of N-Troc and N-Fmoc as protecting groups in GlcN-based lactol acceptors offers the advantage of stabilizing the α-configuration via an intramolecular hydrogen bond between the axial anomeric hydroxy

• unconventional approaches, including intramolecular aglycon delivery (IAD), are particularly impressive [114]. As the synthesis of α,α-1,1'-linked disaccharides has already been systematically reviewed [36], particularly with respect to the synthesis of trehalose-containing lipids of mycobacteria [37], this

Catalytic asymmetric reactions of isocyanides for constructing non-central chirality

• Jia-Yu Liao

Beilstein J. Org. Chem. 2025, 21, 1648–1660, doi:10.3762/bjoc.21.129

• condensation between 27 and the aldehyde afforded INT-A, which was activated by the CPA catalyst through hydrogen bonding interaction. The nucleophilic addition of isocyanide to Int-A produced INT-B bearing a stereogenic center. Subsequently, INT-B underwent intramolecular cyclization to generate axially

Photocatalysis and photochemistry in organic synthesis

• Timothy Noël and
• Bartholomäus Pieber

Beilstein J. Org. Chem. 2025, 21, 1645–1647, doi:10.3762/bjoc.21.128

• ], hydrogen atom transfer [22], halogen atom transfer [23], and energy transfer catalysis [24][25] – have been established as powerful additions to the arsenal of photon-driven reactions. Three articles in this thematic issue exemplify this: The Molloy group developed an intramolecular [2 + 2]-cycloaddition

• of alkenylboronic esters using energy transfer catalysis [26]. Gualandi and co-workers leveraged a combination of photoredox and HAT catalysis to realize the intramolecular nucleophilic amidation of alkenes with β-lactams [27]. Further, Luridiana and colleagues developed a method for the alkylation

Formal synthesis of a selective estrogen receptor modulator with tetrahydrofluorenone structure using [3 + 2 + 1] cycloaddition of yne-vinylcyclopropanes and CO

• Jing Zhang,
• Guanyu Zhang,
• Hongxi Bai and
• Zhi-Xiang Yu

Beilstein J. Org. Chem. 2025, 21, 1639–1644, doi:10.3762/bjoc.21.127

• annulation to construct the C ring (cyclohexenone ring), and an intramolecular SN2 reaction to build the D ring (five-membered ring) [15][16][17][18]. In 2013, Wallace and co-workers disclosed the second route for this molecule (Scheme 2B) [19], in which the five-membered ring B was formed by utilizing

• is the retrosynthetic analysis for the key intermediate 1, which can reach the final compound VI via chlorination and demethylation [19]. Target molecule 1 can be accessed by decarboxylation reaction from compound 13, prepared by an intramolecular Heck reaction between the β-ketoester and the vinyl

Transition-state aromaticity and its relationship with reactivity in pericyclic reactions

• Israel Fernández

Beilstein J. Org. Chem. 2025, 21, 1613–1626, doi:10.3762/bjoc.21.125

• reaction coordinate, and particularly, at the transition state region. This results from the formation of a stabilizing, intramolecular CH3–OH···O=CH2 hydrogen bond at the initial stages of the process which brings together both reactants, significantly enhancing the orbital interactions (mainly HOMO–LUMO

• this case, as the reactions are intramolecular, the ASM terms are referred to the initial reactants and are computed by considering the interaction between E=CH• and •CH=CH–C≡CH radicals. As shown in Figure 8, although the change in the interaction (ΔΔEint) between the fragments is stronger for the

Synthesis of optically active folded cyclic dimers and trimers

• Ena Kumamoto,
• Kana Ogawa,
• Kazunori Okamoto and
• Yasuhiro Morisaki

Beilstein J. Org. Chem. 2025, 21, 1603–1612, doi:10.3762/bjoc.21.124

• ]paracyclophanes via Wurtz-type intramolecular cyclization [3]. [2.2]Paracyclophane has a molecular structure in which two benzene rings are stacked face-to-face with ethylene chains at the para positions. Various studies have been conducted on their reactivities and physical properties derived from their unique

Thermodynamic equilibrium between locally excited and charge transfer states in perylene–phenothiazine dyads

• Issei Fukunaga,
• Shunsuke Kobashi,
• Yuki Nagai,
• Hiroki Horita,
• Hiromitsu Maeda and
• Yoichi Kobayashi

Beilstein J. Org. Chem. 2025, 21, 1577–1586, doi:10.3762/bjoc.21.121

• simple molecular framework, subtle intramolecular interactions – such as increased conjugation induced by planarization – can have a significant impact on the nature of photoinduced charge separation. Such molecules with finely tunable excited-state dynamics are expected to play an important role in the

Synthesis of an aza[5]helicene-incorporated macrocyclic heteroarene via oxidation of an o-phenylene-pyrrole-thiophene icosamer

• Yusuke Matsuo,
• Aoi Nakagawa,
• Shu Seki and
• Takayuki Tanaka

Beilstein J. Org. Chem. 2025, 21, 1561–1567, doi:10.3762/bjoc.21.119

• , Japan 10.3762/bjoc.21.119 Abstract The intramolecular oxidative fusion reaction of macrocyclic heteroaromatic arrays has provided strained polycyclic heteroaromatic macrocycles as promising functional molecules. In this study, we prepared an ortho-phenylene-pyrrole-thiophene hybrid icosamer, as the

• in detail. Keywords: cyclophane; fluorescence; heterohelicene; intramolecular oxidative coupling; Introduction Conjugated macrocyclic polyarenes have attracted significant attention due to their stimuli-responsive optoelectronic properties, dynamic structural changes, and host–guest interactions [1

• largest macrocycle ever synthesized is a dodecameric hybrid array of 1,2-phenylene, 2,5-thienylene, and 2,5-pyrrolylene units [22][23]. The intramolecular oxidative coupling of these arrays afforded heterohelicene-incorporated macrocycles D and E, depending on the relative arrangements of the pyrrole and

Ambident reactivity of enolizable 5-mercapto-1H-tetrazoles in trapping reactions with in situ-generated thiocarbonyl S-methanides derived from sterically crowded cycloaliphatic thioketones

• Grzegorz Mlostoń,
• Małgorzata Celeda,
• Marcin Palusiak,
• Heinz Heimgartner,
• Marta Denel-Bobrowska and
• Agnieszka B. Olejniczak

Beilstein J. Org. Chem. 2025, 21, 1508–1519, doi:10.3762/bjoc.21.113

• publications [15], or/and from secondary processes, like an intramolecular rearrangement. Taking into account the postulated basicity (and nucleophilicity) of thiocarbonyl S-methanides 1 derived from cycloaliphatic thioketones [6], the initiating step of these processes can be presented as protonation of the

• intramolecular pathway, which is accelerated in the zwitterionic form 9’ (Scheme 7). Striking differences in the structure of products obtained under identical conditions (THF, 45 °C) from 1a (only thioaminals 9) and from 1b (only dithioacetals 10), deserves also a brief comment. Notably, there were no

• initial products are thioaminals 9, which under the reaction conditions or later on, during the storage in CDCl3 solution, undergo an intramolecular rearrangement presented in Scheme 7. Moreover, the differences observed in the structures of products obtained in reactions with structurally similar

Wittig reaction of cyclobisbiphenylenecarbonyl

• Taito Moribe,
• Junichiro Hirano,
• Hideaki Takano,
• Hiroshi Shinokubo and
• Norihito Fukui

Beilstein J. Org. Chem. 2025, 21, 1454–1461, doi:10.3762/bjoc.21.107

• . A tentative mechanism that may be plausible is shown in Supporting Information File 1, Figure S21, which consists of (1) the nucleophilic attack of methylenetriphenylphosphorane to the exo-methylene group of 3, (2) the intramolecular carbon–carbon-bond formation at the carbonyl group, and (3) the

• group (Figure S20, Supporting Information File 1), which will be due to the disrupted nucleophilic attack to the carbonyl group by the intramolecular steric repulsion toward the Bürgi–Dunitz angle. However, alternative mechanisms initiated by a conventional oxaphosphetane formation cannot not yet be

• temperature-dependent 1H NMR measurements. The relatively preferable formation of bathtub conformation is attributable to the destabilization of the figure-eight structures by the intramolecular steric repulsion between the exo-methylene units and neighboring benzene rings. Resolution The resolution of rac-3

Advances in nitrogen-containing helicenes: synthesis, chiroptical properties, and optoelectronic applications

• Meng Qiu,
• Jing Du,
• Nai-Te Yao,
• Xin-Yue Wang and
• Han-Yuan Gong

Beilstein J. Org. Chem. 2025, 21, 1422–1453, doi:10.3762/bjoc.21.106

• nm) attributed to reversible intramolecular charge transfer [20]. In parallel, several groups explored the functional versatility of heterohelicenes in device-oriented and sensing applications. Crassous’s group synthesized bipyridine-embedded helicenes via the Mallory reaction, enabling coordination

• intramolecular Scholl reactions [24] (Table 3). All compounds exhibited strong absorption in the UV–vis region (250–450 nm) and fluorescence emission between 400–550 nm. Among these, compound 11c, a saddle-shaped dibenzodiaza[8]circulene, was particularly noteworthy as the first example of its kind synthesized

• | values of approximately 3.0 × 10−3, offering new architectures for CPL-active helicenes [40]. Singh’s group developed fluorophore-conjugated aza[7]helicenes 27a–d, with 27b demonstrating pronounced intramolecular charge transfer (ICT), a high ΦF of 0.71 and an extended fluorescence lifetime (τ) of 15.5

Tautomerism and switching in 7-hydroxy-8-(azophenyl)quinoline and similar compounds

• Lidia Zaharieva,
• Vera Deneva,
• Fadhil S. Kamounah,
• Nikolay Vassilev,
• Ivan Angelov,
• Michael Pittelkow and
• Liudmil Antonov

Beilstein J. Org. Chem. 2025, 21, 1404–1421, doi:10.3762/bjoc.21.105

• molecules good candidates for molecular switches [50]. Recently, we have developed a series of 7-hydroxyquinoline Schiff bases, where the tautomeric proton transfer causes intramolecular twisting upon irradiation [51]. The process happens in the excited state and the competition between proton transfer and

• intramolecular hydrogen bonding, keep planarity. However, this situation means that changes in their molar fractions cannot be detected by use of UV–vis spectroscopy, i.e. the tautomerism could be considered only in the frame of change between E and (KE+KK). In the spectra, shown in Figure 2, two distinct

• group surrounded by fluorine atoms, which could spontaneously deprotonate in polar solvents, while the tautomeric OH/NH group is always a part of strong intramolecular hydrogen bonding and the possibility for deprotonation is low. The deprotonation of the phenyl OH group is also supposed by the

N-Salicyl-amino acid derivatives with antiparasitic activity from Pseudomonas sp. UIAU-6B

• Joy E. Rajakulendran,
• Emmanuel Tope Oluwabusola,
• Michela Cerone,
• Terry K. Smith,
• Olusoji O. Adebisi,
• Adefolalu Adedotun,
• Gagan Preet,
• Sylvia Soldatou,
• Hai Deng,
• Rainer Ebel and
• Marcel Jaspars

Beilstein J. Org. Chem. 2025, 21, 1388–1396, doi:10.3762/bjoc.21.103

• ]. The biosynthetic route of compound 1 leads to the amide-bond formation step between the PmsG-tethered threonine and salicylic acyl group leading to intramolecular dehydration. The decarboxylated product of histidine, histamine serves as a nucleophilic substrate to release the corresponding uncyclised

Oxetanes: formation, reactivity and total syntheses of natural products

• Peter Gabko,
• Martin Kalník and
• Maroš Bella

Beilstein J. Org. Chem. 2025, 21, 1324–1373, doi:10.3762/bjoc.21.101

• discussed in more detail and illustrated by specific examples. 1.1 C–O bond-forming cyclisations 1.1.1 Intramolecular Williamson etherifications: Discovered by Alexander Williamson in 1850, this reaction is an SN2 substitution in which a leaving group, typically a halide or sulphonate ester, is displaced by

• of the resulting alkene [36]. In addition, this intramolecular etherification corresponds to the 4-exo-tet cyclisation which, in terms of kinetics, is the least favoured n-exo-tet cyclisation mode where n ≤ 7 [37]. Nevertheless, the Williamson etherification still remains one of the most common

• oxidation of the metal centre turns the cobalt into an excellent leaving group, allowing for an intramolecular displacement reaction that affords the oxetane ring and regenerates the Co(II) catalyst. In 2023, Silvi et al. described a versatile and practical methodology that couples Williamson etherification

Recent advances in amidyl radical-mediated photocatalytic direct intermolecular hydrogen atom transfer

• Hao-Sen Wang,
• Lin Li,
• Xin Chen,
• Jian-Li Wu,
• Kai Sun,
• Xiao-Lan Chen,
• Ling-Bo Qu and
• Bing Yu

Beilstein J. Org. Chem. 2025, 21, 1306–1323, doi:10.3762/bjoc.21.100

• . When introducing electron-donating groups to address this contradiction, another vital impact arises, the intramolecular HAT would take place. The amidyl radical would abstract a hydrogen atom from the nearest C–H, i.e., 1,2-HAT. Taken all these together, the substituent group should be decently

• 8, 9, and 10 with 59%, 60%, and 69% yields. This powerful and efficient toolkit effectively overcame the limitations of intramolecular HAT processes. Building on this strategy, Kanai’s group reported a novel HAT method employing a new radical precursor in an oxidative photocatalytic system in 2018

Recent advances and future challenges in the bottom-up synthesis of azulene-embedded nanographenes

• Bartłomiej Pigulski

Beilstein J. Org. Chem. 2025, 21, 1272–1305, doi:10.3762/bjoc.21.99

• of an azulene-embedded nanographene 49, featuring embedded contiguous azulene units and a narrowed cove-type edge (Scheme 7) [49]. Compound 46 was first subjected to intramolecular oxidation using light-promoted DDQ and as the result the first azulene subunit was introduced giving PAH 47 in an

• [52]. With the appropriate choice of substrates, this approach can also be used for the synthesis of π-extended azulenes. For example, Tobe and co-workers conducted the intramolecular cyclization of 1,4,5,8-tetrakis(mesitylethynyl)naphthalene 50 using I2 in CH2Cl2 (Scheme 8) [53]. In the reaction

• resulted in the mixture of isomeric π-extended azulenes 51 and 52 in rather moderate yields of 8% and 8%, respectively. Both PAHs 51 and 52 contain also embedded non-alternant indenophenalene subunits. Similarly, Murakami and co-workers reported intramolecular dimerization of alkynes followed by a phenyl

Recent advances in oxidative radical difunctionalization of N-arylacrylamides enabled by carbon radical reagents

• Jiangfei Chen,
• Yi-Lin Qu,
• Ming Yuan,
• Xiang-Mei Wu,
• Heng-Pei Jiang,
• Ying Fu and
• Shengrong Guo

Beilstein J. Org. Chem. 2025, 21, 1207–1271, doi:10.3762/bjoc.21.98

• rapid construction of complex molecular architectures. This review aims to summarize the diverse strategies for inducing intramolecular transformations of N-arylacrylamides using various carbon radical reagents, including methods initiated by photonic, thermal, or electrochemical processes, which have

• been extensively investigated by researchers. Keywords: carbon radical reagents; intramolecular transformations; N-arylacrylamides; oxidative difunctionalization; radical reactions; Introduction Alkenes, as abundant and versatile feedstocks, have been widely employed in organic synthesis

• , heteroarylmethanes, phenylethane, and cumene proved compatible with the reaction conditions, providing oxindoles 3a–k with yields ranging from 67% to 86%. As illustrated in Scheme 2, an iron-catalyzed difunctionalization of alkenes involved in intramolecular transformations involving a C(sp3)–H bond adjacent to a

Enhancing chemical synthesis planning: automated quantum mechanics-based regioselectivity prediction for C–H activation with directing groups

• Julius Seumer,
• Nicolai Ree and
• Jan H. Jensen

Beilstein J. Org. Chem. 2025, 21, 1171–1182, doi:10.3762/bjoc.21.94

• Chen et al. [4]. We are excluding cyclization reactions for which the regioselectivity is not only determined by the activation energy to form the palladacycle intermediate but also by which site is accessible for the intramolecular cyclization. Using the previously described workflow, we were able to

• with the experimentally observed reaction site in green and the predicted reaction site marked by a blue circle. For molecule 1, we can see in the original paper from Yeung et al. [26] that the reaction preceding the C–H activation is an intramolecular cyclization between the C atom marked in green and

• the C atom marked by a blue circle. This reaction was originally not labelled as a cyclization reaction, which is why we did not remove it from the dataset. Nevertheless, upon inspection, our QM workflow correctly predicts the reaction site(s) of the intramolecular cyclization as it predicts one of

A multicomponent reaction-initiated synthesis of imidazopyridine-fused isoquinolinones

• Ashutosh Nath,
• John Mark Awad and
• Wei Zhang

Beilstein J. Org. Chem. 2025, 21, 1161–1169, doi:10.3762/bjoc.21.92

• Ashutosh Nath John Mark Awad Wei Zhang Department of Chemistry, University of Massachusetts Boston, 100 Morrissey Boulevard, Boston, MA 02125, USA 10.3762/bjoc.21.92 Abstract A new synthetic route initiated with Groebke–Blackburn–Bienaymé (GBB) followed by N-acylation, intramolecular Diels–Alder

• –Bienaymé (GBB); imidazopyridine; intramolecular Diels–Alder (IMDA); isoquinolinone; multicomponent reaction (MCR); re-aromatization; Introduction Multicomponent reactions (MCRs) have intrinsic green chemistry advantages of synthetic efficiency and operational simplicity. Performing post-condensational

• as HIV inhibitors [14]. The imidazo[1,2-a]pyridine ring can be readily synthesized by the GBB reaction [10][15], while the isoquinolinone ring is commonly generated by a cyclative lactamization process. Performing a GBB reaction followed by an intramolecular amidation is a good approach for making

Recent advances in synthetic approaches for bioactive cinnamic acid derivatives

• Betty A. Kustiana,
• Galuh Widiyarti and
• Teni Ernawati

Beilstein J. Org. Chem. 2025, 21, 1031–1086, doi:10.3762/bjoc.21.85

Recent total synthesis of natural products leveraging a strategy of enamide cyclization

• Chun-Yu Mi,
• Jia-Yuan Zhai and
• Xiao-Ming Zhang

Beilstein J. Org. Chem. 2025, 21, 999–1009, doi:10.3762/bjoc.21.81

• , lycopodine features a characteristic tetracyclic structure with a bridged cyclohexanone. To address the challenges associated with constructing the complex ring systems of this structure, She and co-workers devised an intramolecular aza-Prins cyclization strategy to form both the bridge ring and the N-hetero

• the terminal alkene and the conformational strain of forming a bridge[3.2.1]bicycle might be responsible for a selective 6-exo-trig cyclization. From tricyclic compound 4, anti-Markovnikov oxidation catalyzed by palladium led to the formation of aldehyde 5. When treated with p-TsOH, the intramolecular

• ring was then constructed via an intramolecular reductive Heck reaction from vinyl bromide 10 with exclusive regioselectivity. Considering the strain of forming the 7-membered ring, this highly efficient 7-endo-trig (vs 6-exo-trig) transannular Heck cyclization reaction was remarkable to be realized in

Harnessing tethered nitreniums for diastereoselective amino-sulfonoxylation of alkenes

• Shyam Sathyamoorthi,
• Appasaheb K. Nirpal,
• Dnyaneshwar A. Gorve and
• Steven P. Kelley

Beilstein J. Org. Chem. 2025, 21, 947–954, doi:10.3762/bjoc.21.78

• expect this metal-free protocol for alkene amino-oxygenation to find widespread use in both academic and industrial synthetic chemistry. Poor performers. Existing reports of intramolecular alkene functionalization reactions with nitreniums have focused on amino-trifluoroacetoxylations. We show the first

A convergent synthetic approach to the tetracyclic core framework of khayanolide-type limonoids

• Zhiyang Zhang,
• Jialei Hu,
• Hanfeng Ding,
• Li Zhang and
• Peirong Rao

Beilstein J. Org. Chem. 2025, 21, 926–934, doi:10.3762/bjoc.21.75

• molecules could be synthesized from diol 9 through a late-stage modification involving adjustment of the oxidation state and regioselective acylation. The formation of 9 was envisioned to proceed via an intramolecular pinacol coupling [30][31] of [5,5,6,6]-tetracycle 10, which forges the A2 ring while

• essential tertiary alcohol at C1. The β-hydroxylactone moiety (D ring) in 11 could be introduced through an intramolecular aldol condensation [35] of acetate 12. Ultimately, the preparation of 12 could be traced back to aldehyde 14 through 1,2-Grignard addition with an organomagnesium reagent [36] prepared

• % brsm). Since the newly created configuration at C30 was inconsequential, an intramolecular aldol reaction was directly carried out by treatment with LiHMDS to furnish β-hydroxylactone, which could be converted to dienone 11 through TPAP oxidation. Having secured 11, we proceeded to evaluate the pivotal

Silver(I) triflate-catalyzed post-Ugi synthesis of pyrazolodiazepines

• Muhammad Hasan,
• Anatoly A. Peshkov,
• Syed Anis Ali Shah,
• Andrey Belyaev,
• Chang-Keun Lim,
• Shunyi Wang and
• Vsevolod A. Peshkov

Beilstein J. Org. Chem. 2025, 21, 915–925, doi:10.3762/bjoc.21.74

• isocyanides, followed by a silver(I) triflate-catalyzed intramolecular heteroannulation of the resulting pyrazole-tethered propargylamides occurring in a 7-endo-dig fashion. The approach is scalable and tolerates a diverse range of substitution patterns. Keywords: heterocycles; post-MCR transformations

• intramolecular condensation with the arylglyoxal-derived keto-carbonyl group [37]. In 2024, the same group streamlined this strategy by utilizing unprotected anthranilic acids, enabling the assembly of benzo[e][1,4]diazepines 6 directly during the Ugi reaction step [38]. In 2013, Van der Eycken and co-workers

• ][44] and hydroalkoxylations [45]. In 2013, Van der Eycken and co-workers described an intramolecular cationic gold-catalyzed post-Ugi heteroannulation of imidazoles with activated alkynes for the diversity-oriented synthesis of imidazo[1,4]diazepines 13 from Ugi-derived propargylamides 12 (Scheme 1c