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Search for "protecting group" in Full Text gives 467 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Modern synthetic pathways towards eribulin and its subunits

  • Sebastian Dominik Graf

Beilstein J. Org. Chem. 2026, 22, 495–526, doi:10.3762/bjoc.22.37

Graphical Abstract
  • metathesis with ethyl acrylate, acidic cleavage of the diol protecting group and addition of NaH induced the oxy-Michael reaction towards 18 in 4:1 dr. Reduction of the ester moiety, subsequent protection with TBDPSCl and methylation of the secondary alcohol furnished 19. After Bn-deprotection, iodination
  • -moiety and reprotection with (iPr)2SiHCl afforded 75. The addition of BF3·OEt2 at low temperatures induced the fluorination of the silane protecting group and a follow-up intramolecular hydride transfer (via 76). Afterwards, the introduced fluoride was substituted with Mg(OMe)2 in MeOH and the
  • stereochemistry of the central protected alcohol unit was inverted within a sequence involving deprotection of all acetates, protection of the 1,2-diol as an acetonide, oxidation of the central alcohol with DMP and stereospecific reduction, which yielded alcohol 78. Finally, the silyl protecting group was cleaved
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Published 19 Mar 2026

Synthesis of a HDAC inhibitor–nanogold probe for cryo-EM visualization in class I HDAC co-repressor complexes

  • Wiktoria A. Pytel,
  • John W. R. Schwabe and
  • James T. Hodgkinson

Beilstein J. Org. Chem. 2026, 22, 480–485, doi:10.3762/bjoc.22.35

Graphical Abstract
  • dibenzylated by-product. Compound 5 was then coupled to the CI-994 intermediate 3 via HATU-mediated amide bond formation to produce 6 in good yield. Removal of the benzyl protecting group was performed by catalytic hydrogenation and acid 7 was obtained in near quantitative yield. Intermediate 7 was converted
  • to its corresponding NHS ester 8 and residual starting material was removed by column chromatography. The Boc-protecting group was removed under anhydrous conditions in good yield and the structure of 9 was confirmed by NMR spectroscopy. Compound 9 was maintained as the TFA salt for the final step
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Published 17 Mar 2026

A facile and practical method for the synthesis of trans-(±)-taxifolin and its derivatives via Darzens reaction

  • Bo Peng,
  • Panpan Yang,
  • Maaz Khan,
  • Xiaotong Lin,
  • Jiang Wu,
  • Peng Fu and
  • Qingqing Wu

Beilstein J. Org. Chem. 2026, 22, 443–450, doi:10.3762/bjoc.22.31

Graphical Abstract
  • failed because of concomitant protecting group cleavage (Supporting Information File 1, Table S1, entries 1 and 2). Subsequently, a series of common brominating reagents, such as Br2, PTT (trimethylphenylammonium tribromide) and NBS were attempted, but unfortunately, cleavage of MOM was still observed
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Published 12 Mar 2026

Cone p-aminocalix[4]arenes enriched with ‘clickable’ alkyne or azide functionalities

  • Ilia Korniltsev,
  • Vasily Bazhenov,
  • Alexander Gorbunov,
  • Dmitry Cheshkov,
  • Stanislav Bezzubov,
  • Vladimir Kovalev and
  • Ivan Vatsouro

Beilstein J. Org. Chem. 2026, 22, 399–415, doi:10.3762/bjoc.22.28

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  • ), AcOH, dichloromethane, rt, 48 h. Reduction of calixarenes 11, 15 and 17. Conditions: i) SnCl2·2H2O, HCl, EtOH, H2O, 70 °C, then KOH, H2O. Protecting group replacement in propargylated p-aminocalix[4]arenes. Conditions: i) Boc2O, Et3N, dichloromethane, rt; ii) H2O, n-Bu4NF·3H2O, THF, rt; iii) H2O, n
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Published 09 Mar 2026

Synthesis of tricyclic fused pyrrolidine nitroxides from 2-alkynylpyrrolidine-1-oxyls

  • Mark M. Gulman,
  • Yuliya F. Polienko,
  • Sofia Yu. Trakhininа,
  • Yuri V. Gatilov,
  • Tatyana V. Rybalova,
  • Sergey A. Dobrynin and
  • Igor A. Kirilyuk

Beilstein J. Org. Chem. 2026, 22, 344–351, doi:10.3762/bjoc.22.22

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  • metalation of trimethylsilylacetylene or benzyl propargyl ether with ethylmagnesium bromide. After quenching, removal of the MOP protecting group, and oxidation by atmospheric oxygen the nitroxides 2d and 2e were isolated in 64% and 66% yields, respectively. Terminal alkynes can be converted into
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Published 19 Feb 2026

Asymmetric Mannich reaction of aromatic imines with malonates in the presence of multifunctional catalysts

  • Kadri Kriis,
  • Harry Martõnov,
  • Annette Miller,
  • Mia Peterson,
  • Ivar Järving and
  • Tõnis Kanger

Beilstein J. Org. Chem. 2026, 22, 151–157, doi:10.3762/bjoc.22.8

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  • Mannich reaction between a 2-sulfonylpyridine protected imine and a malonate (Scheme 1). The pyridine-containing protecting group was chosen considering our catalyst design. We envisioned that halogen bond (XB) will complement hydrogen bonds to activate an imine towards the nucleophilic attack of the
  • the halogen bond is not essential for the stereoselectivity of the reaction, but the halogen atom has a beneficial effect on both reactivity and stereoselectivity. A comparative experiment using an imine with a para-toluenesulfonyl protecting group afforded the product in lower selectivity (Table 1
  • , entry 17), further highlighting the importance of the pyridine ring containing protecting group. The interaction between catalyst E and the imine was further investigated by 19F NMR studies (see Supporting Information File 1). To further elucidate the role of noncovalent interactions, we conducted
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Published 16 Jan 2026

Total synthesis of natural products based on hydrogenation of aromatic rings

  • Haoxiang Wu and
  • Xiangbing Qi

Beilstein J. Org. Chem. 2026, 22, 88–122, doi:10.3762/bjoc.22.4

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  • contain complex three-dimensional structures, make total synthesis challenging. The retrosynthetic analysis [9], alongside the evolution of methodologies such as “two-phase synthesis” [10], “biomimetic synthesis” [11], or “protecting-group-free synthesis” [12], has progressively streamlined synthetic
  • chloride. Finally, through a sequence of removal of the Cbz protecting group, alcohol chlorination, proximal nucleophilic substitution, and deprotection of the secondary alcohol, the first total synthesis of nominine was completed. Although the synthetic route seemed to be lengthy, this challenging total
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Published 07 Jan 2026

Advances in Zr-mediated radical transformations and applications to total synthesis

  • Hiroshige Ogawa and
  • Hugh Nakamura

Beilstein J. Org. Chem. 2026, 22, 71–87, doi:10.3762/bjoc.22.3

Graphical Abstract
  • % yield. No epimerization at the β-position was observed, and 57 was obtained as a single product. Subsequent removal of the silyl protecting group under PivOH buffer/TBAF conditions, followed by PPTS treatment, enabled spiroketal formation. Finally, epimerization at C38 with TMSOTf completed the total
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Published 05 Jan 2026

One-pot synthesis of ethylmaltol from maltol

  • Immanuel Plangger,
  • Marcel Jenny,
  • Gregor Plangger and
  • Thomas Magauer

Beilstein J. Org. Chem. 2025, 21, 2755–2760, doi:10.3762/bjoc.21.212

Graphical Abstract
  • via methylation of a dianionic intermediate, proved unsuitable due to competing overalkylation and the necessity of sub-zero temperatures. In contrast, a transient protecting group approach enabled selective methylation under mild conditions. This culminated in a scalable, operationally simple one-pot
  • explore a modified and more selective approach with milder reaction parameters. In our revised strategy, we planned to introduce a transient protecting group for the free hydroxy group, thereby avoiding the necessity of dianion formation with the aim of improving solubility and stability (Table 2). We
  • sub-zero temperatures rendered the strategy undesirable. Subsequent exploration of a transient protecting group strategy culminated in a one-pot procedure affording ethylmaltol (1) at a multigram-scale at ≥0 °C with a markedly improved purity profile. A key advantage of the presented approach to
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Published 29 Dec 2025

Sustainable electrochemical synthesis of aliphatic nitro-NNO-azoxy compounds employing ammonium dinitramide and their in vitro evaluation as potential nitric oxide donors and fungicides

  • Alexander S. Budnikov,
  • Nikita E. Leonov,
  • Michael S. Klenov,
  • Andrey A. Kulikov,
  • Igor B. Krylov,
  • Timofey A. Kudryashev,
  • Aleksandr M. Churakov,
  • Alexander O. Terent’ev and
  • Vladimir A. Tartakovsky

Beilstein J. Org. Chem. 2025, 21, 2739–2754, doi:10.3762/bjoc.21.211

Graphical Abstract
  • 68% yield without cleavage of the acetonide protecting group. Note that compound 2f is not accessible using the known approach (see Scheme 1a), because the dioxane ring is opened during the nitration step. Surprisingly, nitro-NNO-azoxylation products 2g and 2h were obtained from methyl and ethyl 2
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Published 29 Dec 2025

Total synthesis of asperdinones B, C, D, E and terezine D

  • Ravi Devarajappa and
  • Stephen Hanessian

Beilstein J. Org. Chem. 2025, 21, 2730–2738, doi:10.3762/bjoc.21.210

Graphical Abstract
  • , treatment of N-acetyl-5-prenyl-1H-indole (22) as a test substrate with HCl in dioxane or TFA in dichloromethane led to Markovnikov hydrochlorination and hydrotrifluoroacetylation of the prenyl group, respectively (Scheme 4) [57][58]. This result required the use of an N-protecting group in the iodozinc
  • (6) and ent-asperdinone E, now using an N-Boc protecting group (Scheme 8). Treatment of 3-iodoindole 39 with the iodozinc reagent prepared from N-Boc-ʟ-alanine methyl ester ((R)-35) under Negishi coupling conditions afforded 40 in excellent yield. Cleavage of the N-Boc group and amide formation with
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Published 17 Dec 2025

Recent advancements in the synthesis of Veratrum alkaloids

  • Morwenna Mögel,
  • David Berger and
  • Philipp Heretsch

Beilstein J. Org. Chem. 2025, 21, 2657–2693, doi:10.3762/bjoc.21.206

Graphical Abstract
  • of green for strategic connections, yellow for neutral, e.g., functional group interconversion and isomerization, orange for non-strategic reactions, and red for protecting group (PG) manipulations (Scheme 3). Protecting group manipulations refer to any protection or deprotection of a functional
  • installed another exo-methylene (in the future F-ring), which would later be reduced to the methyl group at C25. Staudinger reduction and two protecting group manipulations set the stage for the formation of the piperidine (F-ring) through a Mitsunobu reaction. Hydrogenation employing Wilkinson’s catalyst
  • metathesis for closing the D-ring (Scheme 7). For the left-hand fragment including the A-, B-, and C-ring, the synthesis started from commercially available (S)-Wieland–Miescher ketone (34), which can also be synthesized via a three-step sequence (Scheme 8). To access 35, several protecting group
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Published 10 Dec 2025

Chemoenzymatic synthesis of the cardenolide rhodexin A and its aglycone sarmentogenin

  • Fuzhen Song,
  • Mengmeng Zheng,
  • Dongkai Wang,
  • Xudong Qu and
  • Qianghui Zhou

Beilstein J. Org. Chem. 2025, 21, 2637–2644, doi:10.3762/bjoc.21.204

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  • Sciences and Biotechnology, Zhangjiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai, 200240, China 10.3762/bjoc.21.204 Abstract Herein, we report a concise chemoenzymatic synthesis of the cardenolide rhodexin A in 9 steps and the first protecting-group-free synthesis of its
  • ; C–H hydroxylation; chemoenzymatic synthesis; Mukaiyama hydration; protecting-group-free synthesis; Introduction Cardiac glycosides (CGs) are widely distributed natural products, generated by plants and amphibians [1]. Structurally, they are composed of an aglycone-steroidal moiety, an unsaturated
  • -electron demand Diels–Alder (IEDDA) reaction was utilized to successfully construct the BCD tricyclic structure with the correct configuration of the four contiguous stereocenters in just one step. However, the requirement of a series of protecting group manipulations undermined the step-economy and
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Published 03 Dec 2025

Visible-light-driven NHC and organophotoredox dual catalysis for the synthesis of carbonyl compounds

  • Vasudevan Dhayalan

Beilstein J. Org. Chem. 2025, 21, 2584–2603, doi:10.3762/bjoc.21.200

Graphical Abstract
  • by the removal of the PMP protecting group using 2 equivalents of CAN and pyridine, affording 2,3-dihydrofurans 12a in 58% (Scheme 4) [54]. In 2022, Sumida, Ohmiya, and co-workers developed a dual NHC/4CzIPN-organocatalyzed, versatile, light-driven silyl radical generation strategy from substituted
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Published 21 Nov 2025

Total syntheses of highly oxidative Ryania diterpenoids facilitated by innovations in synthetic strategies

  • Zhi-Qi Cao,
  • Jin-Bao Qiao and
  • Yu-Ming Zhao

Beilstein J. Org. Chem. 2025, 21, 2553–2570, doi:10.3762/bjoc.21.198

Graphical Abstract
  • reported the first total synthesis of ryanodine from ryanodol [47] (Scheme 5). Their strategy utilized a novel boronate protecting group to mask the four syn-oriented hydroxy groups. A critical step was the in-situ generation of the pyrrole-2-carboxylate unit from a glycine ester and 1,3-bis(dimethylamino
  • to “climbing a staircase” – where each successive step involves functional group interconversions and protecting group manipulations, culminating in low overall efficiency. In contrast, Baran’s “two-phase” synthesis strategy emulates nature’s “cyclization–functionalization” logic [53][54]. This
  • transesterification sequence produced mono-enone 106, whose hydration installed the C6 stereocenter to yield 107. Further protecting group and oxidation state adjustments afforded lactone 108, which was transformed via an intramolecular SN2′ reaction (single-electron reduction), m-CPBA epoxidation, acid-promoted
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Published 19 Nov 2025

Rapid access to the core of malayamycin A by intramolecular dipolar cycloaddition

  • Yilin Liu,
  • Yuchen Yang,
  • Chen Yang,
  • Sha-Hua Huang,
  • Jian Jin and
  • Ran Hong

Beilstein J. Org. Chem. 2025, 21, 2542–2547, doi:10.3762/bjoc.21.196

Graphical Abstract
  • inaccessible (Scheme 5) [41]. We assumed the steric hinderance of the Boc protecting group might have a great impact to the reactivity of ketone. Investigation along this line is currently on the way. Conclusion In summary, we have streamlined the rapid construction of the core perhydrofuropyran skeleton of
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Published 17 Nov 2025

Synthesis of the tetracyclic skeleton of Aspidosperma alkaloids via PET-initiated cationic radical-derived interrupted [2 + 2]/retro-Mannich reaction

  • Ru-Dong Liu,
  • Jian-Yu Long,
  • Zhi-Lin Song,
  • Zhen Yang and
  • Zhong-Chao Zhang

Beilstein J. Org. Chem. 2025, 21, 2470–2478, doi:10.3762/bjoc.21.189

Graphical Abstract
  • % (Table 1, entry 10) compared with that in entry 9 (42%). These results indicate that Cbz is a more effective protecting group than Boc under the profiled conditions. The effects of the reaction temperature on the outcome of the PET reaction of 9a were investigated. Among the conditions screened (Table 1
  • , which indicates that steric hindrance at C2 has a limited effect on the reactivity. However, when the steric hindrance of the protecting group was increased by replacing –Cbz with –Boc, the activity of the PET reaction decreased, which resulted in a lower yield of 10f (45%). In the case of substrate 9g
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Published 10 Nov 2025

Transformation of the cyclohexane ring to the cyclopentane fragment of biologically active compounds

  • Natalya Akhmetdinova,
  • Ilgiz Biktagirov and
  • Liliya Kh. Faizullina

Beilstein J. Org. Chem. 2025, 21, 2416–2446, doi:10.3762/bjoc.21.185

Graphical Abstract
  • completed by converting the exocyclic methyl ester 144 to an aldehyde145 using a one-pot DIBAL-H/Dess–Martin procedure followed by the removal of TMS protecting group using a stoichiometric Wilkinson’s catalyst (Scheme 25). The authors noted that, in the final stages of reduction and oxidation, yields were
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Published 06 Nov 2025

Synthetic study toward vibralactone

  • Liang Shi,
  • Jiayi Song,
  • Yiqing Li,
  • Jia-Chen Li,
  • Shuqi Li,
  • Li Ren,
  • Zhi-Yun Liu and
  • Hong-Dong Hao

Beilstein J. Org. Chem. 2025, 21, 2376–2382, doi:10.3762/bjoc.21.182

Graphical Abstract
  • deprotection followed by C–H insertion. However, when attempting to remove the ketal protecting group, only decomposition of the starting material was observed. A plausible explanation for this outcome is that the β-lactone ring, located at the β-position of the methyl ketone, may undergo facile β-elimination
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Published 04 Nov 2025

Comparative analysis of complanadine A total syntheses

  • Reem Al-Ahmad and
  • Mingji Dai

Beilstein J. Org. Chem. 2025, 21, 2334–2344, doi:10.3762/bjoc.21.178

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  • reinstallation of a single TMS on the alkyne provided pyridyl-alkyne 22 for the second [2 + 2 + 2] cycloaddition reaction which proved nontrivial, with the protecting group on the secondary amine of the alkyne-nitrile moiety and the choice of ligand playing crucial roles. Specifically, when using 19 as the
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Published 30 Oct 2025

Recent advances in Norrish–Yang cyclization and dicarbonyl photoredox reactions for natural product synthesis

  • Peng-Xi Luo,
  • Jin-Xuan Yang,
  • Shao-Min Fu and
  • Bo Liu

Beilstein J. Org. Chem. 2025, 21, 2315–2333, doi:10.3762/bjoc.21.177

Graphical Abstract
  • blue LEDs at room temperature constructed a single diastereoisomer 23 in 90% yield. From 23, the ABCDE pentacyclic skeleton of phainanoids (27) was ultimately established via a Mitsunobu reaction, intramolecular nucleophilic substitution with in situ-generated aryllithium, and protecting group
  • stereoretentive coupling at C2 with aryl bromide 86, yielding 88 as a single diastereomer. Manipulation of the protecting group of 88 arrived at lycoplatyrine A (89). Notably, 87 and related α-hydroxy-β-lactams were obtained via Norrish–Yang cyclization of the corresponding neat α-keto amides in the solid state
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Published 30 Oct 2025

C2 to C6 biobased carbonyl platforms for fine chemistry

  • Jingjing Jiang,
  • Muhammad Noman Haider Tariq,
  • Florence Popowycz,
  • Yanlong Gu and
  • Yves Queneau

Beilstein J. Org. Chem. 2025, 21, 2103–2172, doi:10.3762/bjoc.21.165

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Published 15 Oct 2025
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  • the presence of Fe(dpm)3/Ph(iPrO)SiH2 proceeded smoothly to furnish the tetracyclic product 39 in 56% yield with 2.5:1 ratio. Finally, removal of the acetonide and the Bn protecting group completed the total synthesis of (+)-aplysiasecosterol A (6). Total synthesis of (+)-cyrneine A, (−)-cyrneine B
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Published 14 Oct 2025

Discovery of cytotoxic indolo[1,2-c]quinazoline derivatives through scaffold-based design

  • Daniil V. Khabarov,
  • Valeria A. Litvinova,
  • Lyubov G. Dezhenkova,
  • Dmitry N. Kaluzhny,
  • Alexander S. Tikhomirov and
  • Andrey E. Shchekotikhin

Beilstein J. Org. Chem. 2025, 21, 2062–2071, doi:10.3762/bjoc.21.161

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  • as the activating agent under standard peptide coupling conditions. Cleavage of the Boc-protecting group with TFA afforded the target 6-oxoindolo[1,2-c]quinazoline-12-carboxamides 7a–c (Scheme 2). 3-Aminomethylindole derivatives represent a well-established class of compounds with diverse biological
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Published 13 Oct 2025

Bioinspired total syntheses of natural products: a personal adventure

  • Zhengyi Qin,
  • Yuting Yang,
  • Nuran Yan,
  • Xinyu Liang,
  • Zhiyu Zhang,
  • Yaxuan Duan,
  • Huilin Li and
  • Xuegong She

Beilstein J. Org. Chem. 2025, 21, 2048–2061, doi:10.3762/bjoc.21.160

Graphical Abstract
  • using chiral compound 40 with an acid-sensitive protecting group MEM on the alcohol as the precursor, the simple Brønsted acid TsOH successfully promoted the deprotection and dehydration to generate oxa-carbenium 41, which subsequently proceeded the Friedel–Crafts cyclization to furnish
  • sarglamides A, C, D and E were established through a concise and protecting group-free approach, which was definitely inspired and utilized by the analysis of the biogenetic pathway of these natural products. Through this approach, a notable amount of natural products were made in one batch. The synthesis
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Published 09 Oct 2025
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